!!NA_SEQUENCE 1.0
ID TRVRNA2CP standard; genomic RNA; VRL; 3855 BP.
XX
AC Z36974;
XX
SV Z36974.2
XX
DT 07-SEP-1994 (Rel. 40, Created)
DT 21-OCT-2003 (Rel. 77, Last updated, Version 12)
XX
DE Tobacco rattle virus genes for coat protein, 28.7 kDa & 32.8 kDa proteins,
DE genomic RNA
XX
KW 28.7 kDa protein; 32.8 kDa protein; coat protein.
XX
OS Tobacco rattle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tobravirus.
XX
RN [1]
RP 1-3855
RX MEDLINE; 96068819.
RX PUBMED; 7595393.
RA Hernandez C., Mathis A., Brown D.J.F., Bol J.F.;
RT "Sequence of RNA 2 of a nematode-transmissible isolate of tobacco rattle
RT virus";
RL J. Gen. Virol. 76:2847-2851(1995).
XX
RN [2]
RC revised by [4]
RA Hernandez C.;
RT ;
RL Submitted (03-SEP-1994) to the EMBL/GenBank/DDBJ databases.
RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA
RL Leiden, The Netherlands
XX
RN [3]
RA Hernandez C.;
RT ;
RL Submitted (02-MAR-1995) to the EMBL/GenBank/DDBJ databases.
RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA
RL Leiden, The Netherlands
XX
RN [4]
RP 1-3855
RA Hernandez C.;
RT ;
RL Submitted (05-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA
RL Leiden, The Netherlands
XX
DR GOA; Q88897.
DR SPTREMBL; Q88897; Q88897.
DR SPTREMBL; Q88898; Q88898.
DR SPTREMBL; Q88899; Q88899.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3855
FT /db_xref="taxon:12295"
FT /mol_type="genomic RNA"
FT /organism="Tobacco rattle virus"
FT /clone="pK20"
FT /isolate="PPK20"
FT /segment="RNA2"
FT CDS 557. .1171
FT /db_xref="GOA:Q88897"
FT /db_xref="SPTREMBL:Q88897"
FT /note="High homology with other tobraviral coat proteins"
FT /function="coat protein"
FT /product="22.3K"
FT /standard_name="coat protein"
FT /protein_id="CAA85421.1"
FT /translation="MGDMYDESFDKSGGPADLMDDSWVESVSWKDLLKKLHSIKFALQS
FT GRDEITGLLAALNRQCPYSPYEQFPDKKVYFLLDSRANSALGVIQNASAFKRRADEKNA
FT VAGVTNIPANPNTTVTTNQGSTTTTKANTGSTLEEDLYTYYKFDDASTAFHKSLTSLEN
FT MELKSYYRRNFEKVFGIKFGGAAASSSAPPPASGGPIRPNP"
FT CDS 1340. .2404
FT /db_xref="SPTREMBL:Q88898"
FT /function="unknown"
FT /product="28.7K"
FT /protein_id="CAA85422.2"
FT /translation="MHELLRKWLDDTNVLLLDNGLVVKVRSRVPHIRTYEVIGKLSVFD
FT NSLGDDTLFEGKVENVFVFMFRRFLCVNKDGHCYSRKHDELYYYGRVDLDSVSKVTSGY
FT EKLFIHRELYILTDLIERVSKFFNLAQDVVEASFEYAKVEERLGHVRNVLQLAGGKSTN
FT ADLTIKISDDVEQLLGKRGGFLKVVNGILSKNGSDVVTNDNELIHAINQNLVPDKVMSV
FT SNVMKETGFLQFPKFLSKLEGQVPKGTKFLDKHVPDFTWIQALEERVNIRRGESGLQTL
FT LADIVPRNAIAAQKLTMLGYIEYHDYVVIVCQSGVFSDDWATCRMLWAALSSAQLYTYV
FT DASRIGPIVYGWLL"
FT CDS 2587. .>3455
FT /db_xref="SPTREMBL:Q88899"
FT /function="unknown"
FT /product="32.8K"
FT /protein_id="CAA85423.2"
FT /translation="MVIVTKGAYVHEFPRTAEWNAFAQILSREHGYIVSDTALEGAAKP
FT YYVVNSSGFYGPPGLDGLISTLDRELQYYSKLLYEIKGLGVMSDENVFGTQYDGNLTAR
FT VSRLERRLNPMSNIGSSSRPWSEHKSAVKKADLERYVYANFADWSNHLGPAGKSTREVV
FT KYLMYRMGYYSDTSGIGHDLNYKHFRDHLDIYNLTCSPPFLVSSAVVDGHYARDKFVSF
FT QGVCGFNPMFPDVNGLKSSWSLGRQLDDIRSQKKEVSGTNQEPNYYYDGDTLKPIGSGA
FT SVVGERRPG"
XX
SQ Sequence 3855 BP; 1078 A; 647 C; 960 G; 1170 T; 0 other;
Z36974 Length: 3855 October 28, 2003 08:57 Type: N Check: 6087 ..
1 ataaaacatt gcacctatgg tgttgccctg gctggggtat gtcagtgatc
51 gcagtagaat gtactaattg acaagttgga gaatacggta gaacgtcctt
101 atccaacaca gcctttatcc ctctccctga cgaggttttt gtcagtgtaa
151 tatttctttt tgaactatcc agcttagtac cgtacgggaa agtgactggt
201 gtgcttatct ttgaaatgtt actttgggtt tcggttcttt aggttagtaa
251 gaaagcactt gtcttctcat acaaaggaaa acctgacgta tcgcttacga
301 aagtagcaat gaaagaaagg tggtggtttt aatcgtaccg caaaaaacga
351 tggggtcgtt ttaattaact tctcctacaa gcgtctaaac ggacgttggg
401 gttttgctag tttctttaga gaaaactagc taagtcttta atgttatcat
451 tagagatggc ataaatataa tacttgtgtc tgctgataag atcattttaa
501 tttggacgat tagacttgtt gaactacagg ttactgaatc acttgcgcta
551 atcaacatgg gagatatgta cgatgaatca tttgacaagt cgggcggtcc
601 tgctgacttg atggacgatt cttgggtgga atcagtttcg tggaaagatt
651 tgttgaagaa gttacacagc ataaaatttg cactacagtc tggtagagat
701 gagatcactg ggttactagc ggcactgaat agacagtgtc cttattcacc
751 atatgagcag tttccagata agaaggtgta tttcctttta gactcacggg
801 ctaacagtgc tcttggtgtg attcagaacg cttcagcgtt caagagacga
851 gctgatgaga agaatgcagt ggcgggtgtt acaaatattc ctgcgaatcc
901 aaacacaacg gttacgacga accaagggag tactactact accaaggcga
951 acactggctc gactttggaa gaagacttgt acacttatta caaattcgat
1001 gatgcctcta cagctttcca caaatctcta acttcgttag agaacatgga
1051 gttgaagagt tattaccgaa ggaactttga gaaagtattc gggattaagt
1101 ttggtggagc agctgctagt tcatctgcac cgcctccagc gagtggaggt
1151 ccgatacgtc ctaatcccta gggatttaag gacgtgaact ctgttgagat
1201 ctctgtgaaa ttcagagggt gggtgatacc atattcactg atgccattag
1251 cgacatctaa atagggctaa ttgtgactaa tttgagggaa tttcctttac
1301 cattgacgtc agtgtcgttg gtagcatttg agtttcgcaa tgcacgaatt
1351 acttaggaag tggcttgacg acactaatgt gttattgtta gataatggtt
1401 tggtggtcaa ggtacgtagt agagtcccac atattcgcac gtatgaagta
1451 attggaaagt tgtcagtttt tgataattca ctgggagatg atacgctgtt
1501 tgagggaaaa gtagagaacg tatttgtttt tatgttcagg cggttcttgt
1551 gtgtcaacaa agatggacat tgttactcaa ggaagcacga tgagctttat
1601 tattacggac gagtggactt agattctgtg agtaaggtta cctcagggta
1651 cgagaaactc tttattcaca gagaacttta tatcttaaca gatttaattg
1701 agagagtgag taagttcttt aacttagctc aggatgtggt agaagcaagt
1751 tttgagtatg ccaaggttga agagaggtta ggtcacgtca gaaacgtgtt
1801 gcaactggcg ggtggaaaat ccacgaatgc cgatttgaca attaagattt
1851 ctgacgatgt cgaacaactg cttggaaaac gtggtggatt cttgaaggtt
1901 gtgaacggta tcttgagcaa gaatggtagt gacgtagtca ctaacgacaa
1951 tgagcttatt catgcaatta accaaaatct ggtaccagat aaagtcatgt
2001 ctgtgtcgaa cgtaatgaaa gagactgggt ttctgcagtt tccaaagttt
2051 ttatctaagt tggaaggaca ggtaccgaaa ggaacaaaat ttctagacaa
2101 acacgttcct gattttactt ggatacaagc tcttgaagaa agagtgaata
2151 ttcggagagg agaatcggga cttcagactc tattagctga tatcgttccg
2201 aggaatgcta ttgctgctca gaaattgaca atgctaggtt acatcgagta
2251 tcacgactat gtggtgatcg tctgtcagtc tggagtattt agtgacgatt
2301 gggcgacatg tagaatgctt tgggcagcac tatctagtgc tcaactatat
2351 acctatgttg acgccagtag aatcggtcca atcgtttacg gttggttatt
2401 gtgattggtt gatgaggaaa ttctgtttga aggctggttg aaagtaccag
2451 ggcgggagaa gccatattct ctatcgttgt aggaagcgat tgaaataatt
2501 cctgtggtca cgtcgcacgt gaggtggttg ttaccataaa caataatgtc
2551 gttggcagca tttaaaataa ttccatagtt actaagatgg tgattgtgac
2601 caaaggagcg tatgttcatg aatttccgcg tacggctgag tggaatgctt
2651 ttgctcaaat tttgagtaga gaacacggtt atattgtatc agatacagca
2701 ttggagggag cggcgaaacc ttattacgtt gtgaacagta gtgggtttta
2751 tggtcctccg ggcttagatg gtctaatttc taccttggat agagagcttc
2801 agtattactc gaagttgtta tacgaaatca aaggacttgg tgttatgtca
2851 gatgaaaacg tctttggtac acagtatgat ggaaatctta ctgcaagagt
2901 gtctcgtctt gaacgcagac taaaccctat gtcaaacatt gggtctagtt
2951 cgcgtccttg gagtgaacat aagagtgctg ttaaaaaggc tgacttggaa
3001 cgatatgtgt acgccaactt cgccgattgg tcgaatcatt tagggccggc
3051 tgggaagagt actcgcgagg tcgtaaagta tttgatgtac cgaatgggct
3101 attacagtga tacatctggg atcgggcatg atctgaatta caaacatttc
3151 cgggaccatc ttgatattta caacttaact tgttctcccc ctttcctggt
3201 gagcagtgcg gttgtagatg gacactacgc acgggataag ttcgttagtt
3251 ttcaaggtgt atgtgggttc aatccgatgt ttccagacgt gaatggtttg
3301 aagagtagtt ggtctttagg tcgtcaactg gatgatatac ggtctcaaaa
3351 gaaagaggtt tctggaacaa accaggagcc aaactattac tacgatggcg
3401 acacactaaa accgatcggt tcaggtgcga gcgttgtagg agagagaagg
3451 ccgggatgga ggtgaatgtc ccgaagacat taaactacgt tctttaagta
3501 gatccgtgcc tgaagtttta ggttcaattt aaacctacga gattgacatt
3551 ctcgactgat cttgattgat cggtaagtct tttgtaattt aattttcttt
3601 ttgattttat tttaaattgt tatctgtttc tgtgtataga ctgtttgaga
3651 tcggcgttta ggctcattgt cttaccatag gggaacggac tttgtttgtg
3701 ttgttatttt atttgtattt tattaaaatt ctcaacgatc tgaaaaagcc
3751 tcgcgctaag agattgttgg ggggtgagta agtactttta aagtgatgat
3801 ggttacaaag gcaaaagggg taaaacccct cgcctacgta agcgttatta
3851 cgccc