!!NA_SEQUENCE 1.0 ID TRVRNA2CP standard; genomic RNA; VRL; 3855 BP. XX AC Z36974; XX SV Z36974.2 XX DT 07-SEP-1994 (Rel. 40, Created) DT 21-OCT-2003 (Rel. 77, Last updated, Version 12) XX DE Tobacco rattle virus genes for coat protein, 28.7 kDa & 32.8 kDa proteins, DE genomic RNA XX KW 28.7 kDa protein; 32.8 kDa protein; coat protein. XX OS Tobacco rattle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tobravirus. XX RN [1] RP 1-3855 RX MEDLINE; 96068819. RX PUBMED; 7595393. RA Hernandez C., Mathis A., Brown D.J.F., Bol J.F.; RT "Sequence of RNA 2 of a nematode-transmissible isolate of tobacco rattle RT virus"; RL J. Gen. Virol. 76:2847-2851(1995). XX RN [2] RC revised by [4] RA Hernandez C.; RT ; RL Submitted (03-SEP-1994) to the EMBL/GenBank/DDBJ databases. RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA RL Leiden, The Netherlands XX RN [3] RA Hernandez C.; RT ; RL Submitted (02-MAR-1995) to the EMBL/GenBank/DDBJ databases. RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA RL Leiden, The Netherlands XX RN [4] RP 1-3855 RA Hernandez C.; RT ; RL Submitted (05-MAY-1999) to the EMBL/GenBank/DDBJ databases. RL Hernandez C., Institute of Mol. Plant Sciences, Einsteinweg 55, 2300 RA RL Leiden, The Netherlands XX DR GOA; Q88897. DR SPTREMBL; Q88897; Q88897. DR SPTREMBL; Q88898; Q88898. DR SPTREMBL; Q88899; Q88899. XX FH Key Location/Qualifiers FH FT source 1. .3855 FT /db_xref="taxon:12295" FT /mol_type="genomic RNA" FT /organism="Tobacco rattle virus" FT /clone="pK20" FT /isolate="PPK20" FT /segment="RNA2" FT CDS 557. .1171 FT /db_xref="GOA:Q88897" FT /db_xref="SPTREMBL:Q88897" FT /note="High homology with other tobraviral coat proteins" FT /function="coat protein" FT /product="22.3K" FT /standard_name="coat protein" FT /protein_id="CAA85421.1" FT /translation="MGDMYDESFDKSGGPADLMDDSWVESVSWKDLLKKLHSIKFALQS FT GRDEITGLLAALNRQCPYSPYEQFPDKKVYFLLDSRANSALGVIQNASAFKRRADEKNA FT VAGVTNIPANPNTTVTTNQGSTTTTKANTGSTLEEDLYTYYKFDDASTAFHKSLTSLEN FT MELKSYYRRNFEKVFGIKFGGAAASSSAPPPASGGPIRPNP" FT CDS 1340. .2404 FT /db_xref="SPTREMBL:Q88898" FT /function="unknown" FT /product="28.7K" FT /protein_id="CAA85422.2" FT /translation="MHELLRKWLDDTNVLLLDNGLVVKVRSRVPHIRTYEVIGKLSVFD FT NSLGDDTLFEGKVENVFVFMFRRFLCVNKDGHCYSRKHDELYYYGRVDLDSVSKVTSGY FT EKLFIHRELYILTDLIERVSKFFNLAQDVVEASFEYAKVEERLGHVRNVLQLAGGKSTN FT ADLTIKISDDVEQLLGKRGGFLKVVNGILSKNGSDVVTNDNELIHAINQNLVPDKVMSV FT SNVMKETGFLQFPKFLSKLEGQVPKGTKFLDKHVPDFTWIQALEERVNIRRGESGLQTL FT LADIVPRNAIAAQKLTMLGYIEYHDYVVIVCQSGVFSDDWATCRMLWAALSSAQLYTYV FT DASRIGPIVYGWLL" FT CDS 2587. .>3455 FT /db_xref="SPTREMBL:Q88899" FT /function="unknown" FT /product="32.8K" FT /protein_id="CAA85423.2" FT /translation="MVIVTKGAYVHEFPRTAEWNAFAQILSREHGYIVSDTALEGAAKP FT YYVVNSSGFYGPPGLDGLISTLDRELQYYSKLLYEIKGLGVMSDENVFGTQYDGNLTAR FT VSRLERRLNPMSNIGSSSRPWSEHKSAVKKADLERYVYANFADWSNHLGPAGKSTREVV FT KYLMYRMGYYSDTSGIGHDLNYKHFRDHLDIYNLTCSPPFLVSSAVVDGHYARDKFVSF FT QGVCGFNPMFPDVNGLKSSWSLGRQLDDIRSQKKEVSGTNQEPNYYYDGDTLKPIGSGA FT SVVGERRPG" XX SQ Sequence 3855 BP; 1078 A; 647 C; 960 G; 1170 T; 0 other; Z36974 Length: 3855 October 28, 2003 08:57 Type: N Check: 6087 .. 1 ataaaacatt gcacctatgg tgttgccctg gctggggtat gtcagtgatc 51 gcagtagaat gtactaattg acaagttgga gaatacggta gaacgtcctt 101 atccaacaca gcctttatcc ctctccctga cgaggttttt gtcagtgtaa 151 tatttctttt tgaactatcc agcttagtac cgtacgggaa agtgactggt 201 gtgcttatct ttgaaatgtt actttgggtt tcggttcttt aggttagtaa 251 gaaagcactt gtcttctcat acaaaggaaa acctgacgta tcgcttacga 301 aagtagcaat gaaagaaagg tggtggtttt aatcgtaccg caaaaaacga 351 tggggtcgtt ttaattaact tctcctacaa gcgtctaaac ggacgttggg 401 gttttgctag tttctttaga gaaaactagc taagtcttta atgttatcat 451 tagagatggc ataaatataa tacttgtgtc tgctgataag atcattttaa 501 tttggacgat tagacttgtt gaactacagg ttactgaatc acttgcgcta 551 atcaacatgg gagatatgta cgatgaatca tttgacaagt cgggcggtcc 601 tgctgacttg atggacgatt cttgggtgga atcagtttcg tggaaagatt 651 tgttgaagaa gttacacagc ataaaatttg cactacagtc tggtagagat 701 gagatcactg ggttactagc ggcactgaat agacagtgtc cttattcacc 751 atatgagcag tttccagata agaaggtgta tttcctttta gactcacggg 801 ctaacagtgc tcttggtgtg attcagaacg cttcagcgtt caagagacga 851 gctgatgaga agaatgcagt ggcgggtgtt acaaatattc ctgcgaatcc 901 aaacacaacg gttacgacga accaagggag tactactact accaaggcga 951 acactggctc gactttggaa gaagacttgt acacttatta caaattcgat 1001 gatgcctcta cagctttcca caaatctcta acttcgttag agaacatgga 1051 gttgaagagt tattaccgaa ggaactttga gaaagtattc gggattaagt 1101 ttggtggagc agctgctagt tcatctgcac cgcctccagc gagtggaggt 1151 ccgatacgtc ctaatcccta gggatttaag gacgtgaact ctgttgagat 1201 ctctgtgaaa ttcagagggt gggtgatacc atattcactg atgccattag 1251 cgacatctaa atagggctaa ttgtgactaa tttgagggaa tttcctttac 1301 cattgacgtc agtgtcgttg gtagcatttg agtttcgcaa tgcacgaatt 1351 acttaggaag tggcttgacg acactaatgt gttattgtta gataatggtt 1401 tggtggtcaa ggtacgtagt agagtcccac atattcgcac gtatgaagta 1451 attggaaagt tgtcagtttt tgataattca ctgggagatg atacgctgtt 1501 tgagggaaaa gtagagaacg tatttgtttt tatgttcagg cggttcttgt 1551 gtgtcaacaa agatggacat tgttactcaa ggaagcacga tgagctttat 1601 tattacggac gagtggactt agattctgtg agtaaggtta cctcagggta 1651 cgagaaactc tttattcaca gagaacttta tatcttaaca gatttaattg 1701 agagagtgag taagttcttt aacttagctc aggatgtggt agaagcaagt 1751 tttgagtatg ccaaggttga agagaggtta ggtcacgtca gaaacgtgtt 1801 gcaactggcg ggtggaaaat ccacgaatgc cgatttgaca attaagattt 1851 ctgacgatgt cgaacaactg cttggaaaac gtggtggatt cttgaaggtt 1901 gtgaacggta tcttgagcaa gaatggtagt gacgtagtca ctaacgacaa 1951 tgagcttatt catgcaatta accaaaatct ggtaccagat aaagtcatgt 2001 ctgtgtcgaa cgtaatgaaa gagactgggt ttctgcagtt tccaaagttt 2051 ttatctaagt tggaaggaca ggtaccgaaa ggaacaaaat ttctagacaa 2101 acacgttcct gattttactt ggatacaagc tcttgaagaa agagtgaata 2151 ttcggagagg agaatcggga cttcagactc tattagctga tatcgttccg 2201 aggaatgcta ttgctgctca gaaattgaca atgctaggtt acatcgagta 2251 tcacgactat gtggtgatcg tctgtcagtc tggagtattt agtgacgatt 2301 gggcgacatg tagaatgctt tgggcagcac tatctagtgc tcaactatat 2351 acctatgttg acgccagtag aatcggtcca atcgtttacg gttggttatt 2401 gtgattggtt gatgaggaaa ttctgtttga aggctggttg aaagtaccag 2451 ggcgggagaa gccatattct ctatcgttgt aggaagcgat tgaaataatt 2501 cctgtggtca cgtcgcacgt gaggtggttg ttaccataaa caataatgtc 2551 gttggcagca tttaaaataa ttccatagtt actaagatgg tgattgtgac 2601 caaaggagcg tatgttcatg aatttccgcg tacggctgag tggaatgctt 2651 ttgctcaaat tttgagtaga gaacacggtt atattgtatc agatacagca 2701 ttggagggag cggcgaaacc ttattacgtt gtgaacagta gtgggtttta 2751 tggtcctccg ggcttagatg gtctaatttc taccttggat agagagcttc 2801 agtattactc gaagttgtta tacgaaatca aaggacttgg tgttatgtca 2851 gatgaaaacg tctttggtac acagtatgat ggaaatctta ctgcaagagt 2901 gtctcgtctt gaacgcagac taaaccctat gtcaaacatt gggtctagtt 2951 cgcgtccttg gagtgaacat aagagtgctg ttaaaaaggc tgacttggaa 3001 cgatatgtgt acgccaactt cgccgattgg tcgaatcatt tagggccggc 3051 tgggaagagt actcgcgagg tcgtaaagta tttgatgtac cgaatgggct 3101 attacagtga tacatctggg atcgggcatg atctgaatta caaacatttc 3151 cgggaccatc ttgatattta caacttaact tgttctcccc ctttcctggt 3201 gagcagtgcg gttgtagatg gacactacgc acgggataag ttcgttagtt 3251 ttcaaggtgt atgtgggttc aatccgatgt ttccagacgt gaatggtttg 3301 aagagtagtt ggtctttagg tcgtcaactg gatgatatac ggtctcaaaa 3351 gaaagaggtt tctggaacaa accaggagcc aaactattac tacgatggcg 3401 acacactaaa accgatcggt tcaggtgcga gcgttgtagg agagagaagg 3451 ccgggatgga ggtgaatgtc ccgaagacat taaactacgt tctttaagta 3501 gatccgtgcc tgaagtttta ggttcaattt aaacctacga gattgacatt 3551 ctcgactgat cttgattgat cggtaagtct tttgtaattt aattttcttt 3601 ttgattttat tttaaattgt tatctgtttc tgtgtataga ctgtttgaga 3651 tcggcgttta ggctcattgt cttaccatag gggaacggac tttgtttgtg 3701 ttgttatttt atttgtattt tattaaaatt ctcaacgatc tgaaaaagcc 3751 tcgcgctaag agattgttgg ggggtgagta agtactttta aagtgatgat 3801 ggttacaaag gcaaaagggg taaaacccct cgcctacgta agcgttatta 3851 cgccc