Notes on Genus: Closterovirus

flexuous filaments

Type member: Beet yellows virus

Contents

Members of this Genus
General Description
Morphology
Electron Micrograph
Genome
Genus Genomic Organization
Genome Map
Type Member Genomic Organization
All Known Sequences
Curated Sequences

General Description

This is one of three genera in the family Closteroviridae, which are characterised by their very long (950-2000 nm) and very flexuous particles. Members of the genus Closterovirus (from the Greek for "thread") are the largest of all positive sense RNA plant viruses. Members previously classified as closteroviruses but which have a bipartite genome are now classified in the genus Crinivirus. Members previously classified as closteroviruses but which are transmitted by mealybugs are now classified in the genus Ampelovirus. Infected plant cells contain massive particle aggregates, often organized into banded inclusions.

Morphology

Virions filamentous, not enveloped, very flexuous, 950-2000 nm long and 10-13 nm in diameter. There is a distinct virion tail. Symmetry helical, with pitch of 3.4-3.7 nm.

Virions composed of 5% nucleic acid.

Genome

Monopartite, linear, single-stranded, positive sense RNA 15,000 to 20,000 nucleotides long. There are sequences with potential hairpin structure near the 3'-end. 3' terminus has no poly(A) tract and the 5' terminus probably has a methylated nucleotide cap.

Genus Genomic Organization

The RNA is translated from a large number of reading frames (9-12 in the better known members). There is a large replicase near the 5'-end and the remaining ORFs are translated from a set of nested mRNAs. There are two coat proteins towards (but not at) the 3'-end.

Type Member Genomic Organization

The RNA of about 15,500 nucleotides is translated from nine open reading frames:

1a  295 kDa contains methyltransferase and RNA helicase motifs. A leader protease self-cleaves from the N-terminus
1b 53 kDa polymerase expressed as a 1a/1b fusion protein of 348 kDa by +1 frameshift
2 6 kDa small hydrophobic membrane protein involved with products of ORFs 3 and 4 in cell-to-cell movement
3 65 kDa similar to the HSP70 heat-shock proteins which are molecular chaperones
4 64 kDa probably involved with products of ORFs 2 and 3 in cell-to-cell movement
5 24 kDa Minor coat protein incorporated into the virion tail together with the products of ORFs3 and 4
6 22 kDa Coat protein; assembled into particles as the major virion protein
7 20 kDa long distance transport protein
8 21 kDa involved in RNA replication