Notes on Genus: Vesivirus

icosahedra

Type member: Vesicular exanthema of swine virus

Contents

Members of this Genus
General Description
Morphology
Electron Micrograph
Genome
Genus Genomic Organization
Genome Map
Type Member Genomic Organization
Curated Sequences

General Description

The genus Vesivirus (from the type member, Vesicular exanthema of swine virus) is classified in the family Calicviridae. In common with members of the genus Norovirus, but in contrast to the other genera, the coat protein is translated from a separate ORF downstream of the large polyprotein. These two genera are distinct in phylogenetic analyses and in this genus the coat protein ORF begins downstream of the C-terminus of the coat protein.

Morphology

Virions isometric (icosahedral), not enveloped, 35-40 nm in diameter, made of 90 dimers of the coat protein. There are 32 cup-shaped depressions at each of the fivefold and threefold axes.

Genome

Monopartite positive sense single-stranded RNA c. 8.3 kb in length with a genome-linked protein (VPg) at the 5'-terminus and a 3'-polyA tail.

Genus Genomic Organization

The RNA encodes a polyprotein that has (from N- to C- termini) helicase, VPg, protease and polymerase domains. A second ORF encodes the coat protein and there is one additional, smaller, ORF.

Type Member Genomic Organization

The genome of about 8,300 nucleotides is translated into:
  1. Polyprotein of 208.9 kDa with (from N- to C- termini) helicase, VPg, protease and polymerase domains
  2. Coat protein of 78.5 kDa
  3. ORF3 (12.7 kDa) of unknown function