Sequence of DPV Milk vetch dwarf C2 alphasatellite

Milk vetch dwarf virus genome segment 2 encoding viral replication-associated protein, complete sequence.

ACC No: AB000921

Dated: 2008-06-21 | Length: 1009 | CRC: -1481367681

                
ID   AB000921; SV 1; circular; genomic DNA; STD; VRL; 1009 BP.
XX
AC   AB000921;
XX
DT   28-OCT-1998 (Rel. 57, Created)
DT   21-JUN-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Milk vetch dwarf virus genome segment 2 encoding viral
DE   replication-associated protein, complete sequence.
XX
KW   .
XX
OS   Milk vetch dwarf virus
OC   Viruses; ssDNA viruses; Nanoviridae; Nanovirus.
XX
RN   [1]
RP   1-1009
RA   Sano Y.;
RT   ;
RL   Submitted (08-FEB-1997) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi
RL   2-8050, Niigata, Niigata 950-2181, Japan
XX
RN   [2]
RA   Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.;
RT   "Sequences of ten circular ssDNA components associated with the milk vetch
RT   dwarf virus genome";
RL   J. Gen. Virol. 79:3111-3118(1998).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1009
FT                   /organism="Milk vetch dwarf virus"
FT                   /segment="2"
FT                   /lab_host="Pisum sativum"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:67585"
FT   stem_loop       1. .32
FT   CDS             69. .917
FT                   /product="viral replication-associated protein"
FT                   /function="helicase"
FT                   /db_xref="GOA:Q9Z0D4"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR013628"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Z0D4"
FT                   /protein_id="BAA33981.1"
FT                   /translation="MASKRWCFTLNYKTALERETFISLFSRDELNYFVCGDEIAPTTGQ
FT                   KHLQGYVSMKKLIRLGGLKKKFGSIAHWEIAKGDDFQNRDYCTKETLIAEIGAPVKKGS
FT                   NRRKIMEIYEEDPEEMKLRDPDTALRCKAKKLREEYCSEVSVFSLRPWQIELHRALMEV
FT                   PDDRTIIWAYGPDGGEGKSTFAKELIKYGWFYTAGGKTQDILYMYAQDPERNIAFDVPR
FT                   CSSEMMNYQAMEMMKNRVFASTKYRPVDLCIRKKVHLIVFANVAPDPTKLSEDRIVIIN
FT                   C"
FT   polyA_signal    917. .922
FT   TATA_signal     930. .936
XX
SQ   Sequence 1009 BP; 318 A; 174 C; 235 G; 282 T; 0 other;

ab000921 Length: 1009  21-JUN-2008  Type: N  Check: 3671  ..

       1  acgaggcggg ttctagtatt accccgcctc gttacactac ctcgttacat
      51  tttctctctc tagagagaat ggcatctaag cgttggtgct ttacgctgaa
     101  ctataagaca gcgttagaga gagaaacatt catttctctc ttctctcgcg
     151  acgaattgaa ctatttcgtt tgtggagacg aaatcgctcc cactactggg
     201  cagaaacatc tccaaggata tgtttcgatg aagaaattaa ttcgtctggg
     251  tggattgaag aagaaatttg gatctattgc tcattgggag atcgctaagg
     301  gagacgattt tcagaatcgc gattactgta cgaaagaaac cctaattgca
     351  gaaattgggg ctccggtgaa gaaaggctca aatcgaagga agattatgga
     401  gatatacgaa gaagatccag aagaaatgaa attgcgagat ccggatactg
     451  cccttcgctg taaggcgaag aaattaagag aagagtattg ttctgaagtt
     501  tcggtgtttt ctcttcgacc atggcaaatt gagttacaca gagcgttaat
     551  ggaggttcct gacgacagaa caattatttg ggcgtatggc ccagatggag
     601  gcgaaggtaa atctaccttc gcgaaagaat taatcaaata tggttggttt
     651  tatactgcag gaggaaagac ccaggacata ctgtatatgt atgcgcaaga
     701  tcctgaaaga aatattgcgt tcgatgtacc caggtgttct tcggagatga
     751  tgaactatca agcaatggaa atgatgaaga atagagtatt tgcaagtaca
     801  aaatataggc ctgtagatct ttgtataaga aagaaggttc atttaattgt
     851  atttgccaac gtggcacctg accccacaaa attaagtgag gacagaattg
     901  taattatcaa ttgttgatta aatgaataat atattatttt atggaactcc
     951  gtagcgccag ctgtcctttt tttggagagt gtccaaaaaa acctcgttac
    1001  actatatat