Sequence of DPV Tomato leaf curl Java betasatellite

Tomato leaf curl virus satellite DNA C1 gene for C1, complete cds.

ACC No: AB100306

Dated: 2009-04-29 | Length: 1346 | CRC: 225019918

                
ID   AB100306; SV 1; linear; genomic DNA; STD; VRL; 1346 BP.
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AC   AB100306;
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DT   21-JAN-2003 (Rel. 74, Created)
DT   29-APR-2009 (Rel. 100, Last updated, Version 3)
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DE   Tomato leaf curl virus satellite DNA C1 gene for C1, complete cds.
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KW   .
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OS   Tomato leaf curl virus satellite DNA
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   unclassified Satellite Nucleic Acids.
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RN   [1]
RP   1-1346
RA   Ikegami M.;
RT   ;
RL   Submitted (17-JAN-2003) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Masato Ikegami Graduate School of Tohoku University, Department of
RL   Life Science; 1-1 Tsutsumidori-Amamiyamachi, Aobaku, Sendai 981-8555, Japan
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RN   [2]
RA   Kon T., Hidayat S.H., Hase S., Takahashi H., Ikegami M.;
RT   "The Natural Occurrence of Two Distinct Begomoviruses Associated with
RT   DNAbeta and a Recombinant DNA in a Tomato Plant from Indonesia";
RL   Phytopathology 96:517-525(2006).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1346
FT                   /organism="Tomato leaf curl virus satellite DNA"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia"
FT                   /isolation_source="Tomato"
FT                   /db_xref="taxon:53991"
FT   CDS             complement(198. .554)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /db_xref="UniProtKB/TrEMBL:Q80S62"
FT                   /protein_id="BAC55600.1"
FT                   /translation="MTISYSNNKGISFIIQVRLSSEIQITVELEMFSTRSPALVKHKFS
FT                   IPYGHNGIIPPFNFNALEEGIKNLLRIMYKDSSIEEIKAEDMVEIMDMMMQQEAPVIDI
FT                   QVNDEYRVYKHVTV"
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SQ   Sequence 1346 BP; 458 A; 224 C; 251 G; 413 T; 0 other;

ab100306 Length: 1346  29-APR-2009  Type: N  Check: 1243  ..

       1  taatattacc ggtggcgagc ggattttttg ggggtttgtg tgggccccac
      51  aaacaaaaca gatctggaaa acgttagtgg gccgaatgat tgggccgttg
     101  aattgggctt ttttatctaa atcgcatact atttatcaag tccattatta
     151  ttcatataag aaaaaataca ttatacatag tccgtataaa tacacattta
     201  tacggttaca tgcttgtata cacgatattc gtcgtttact tgtatgtcta
     251  ttactggagc ctcttgttgc atcatcatat ccatgatttc aaccatgtct
     301  tctgctttga tctcctcgat cgatgaatct ttatacatga tccttaacaa
     351  gttcttgata ccttcctcta aagcattgaa attgaacggt ggtatgatgc
     401  cattatgtcc gtatgggatg gagaatttgt gcttaactag agctggtgat
     451  ctagttgaaa acatctctag ctcaactgtg atttgtattt ctgagctgag
     501  cctgacttgg atgatgaacg atattccttt attgttgcta tatgatatag
     551  tcatatttgt ttgatggaaa tatattcatt tgaactgtta cttatagccg
     601  aaaatatatg tgttatgtgg ctgtgattaa tgatcgtgtc aaatatgtgt
     651  tctttcattt tttaagtgga tctgtgattg gaatgacgtt gatgtttgtg
     701  attagaaaat aagatattca tccagatgaa caagaaaacg agaaaaaaaa
     751  agcaaagaat gaaaaaaaaa agaaataaaa aacctaataa cataaataac
     801  tatctattca taaataatgg cgcgcagcgg caacaaaaac caaaaacaat
     851  atcaaagaaa aactttataa aataaataga cagaattgaa aaggaaaaaa
     901  aaataaaaag ttaaaactga acaaaaacaa aaattaaaaa taaataaacg
     951  aatttaatta attttaaacc taaattaaat tcaattaaaa ctgtttaaaa
    1001  ataattacca cggtaattat tttattttta ctgcgctggt taatatagga
    1051  gataaataat gagtctccaa taggtaaatt gtctccaata tatcggagta
    1101  caatcgggga cattggagac acttatgagt gaatttccca ttttgccctt
    1151  attaatgtgt ctgttaggcg cgtgggagtg ccctgaaaaa gtagaccttc
    1201  tctctccaaa ctccccggag aagacgatac aggctgatcc cgacctcaat
    1251  ttgcgacacg cgcggcggtg tgtacccctg ggagggtaga aaccactacg
    1301  ctacgcagca gccttagcta cgccggagct tagctcgcca ccgtta