Sequence of DPV Banana bunchy top virus

Banana bunchy top virus DNA-1, complete sequence, isolate: JK3.

ACC No: AB108453

Dated: 2009-01-18 | Length: 1104 | CRC: 1295404796

                
ID   AB108453; SV 1; linear; genomic DNA; STD; VRL; 1104 BP.
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AC   AB108453;
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DT   04-OCT-2003 (Rel. 77, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 5)
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DE   Banana bunchy top virus DNA-1, complete sequence, isolate: JK3.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1104
RA   Furuya N., Natsuaki K.T.;
RT   ;
RL   Submitted (14-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Noriko Furuya Tokyo University of Agriculture, Laboratory of
RL   Tropical Plant Protection; 1-1-1, Sakuragaoka, Setagaya-ku, Tokyo 156-8502,
RL   Japan
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RN   [2]
RA   Furuya N., Kawano S., Natsuaki K.T.;
RT   "Characterization and genetic status of Banana bunchy top virus isolated
RT   from Okinawa, Japan";
RL   J. Gen. Plant Pathol. 71:68-73(2005).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1104
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-1"
FT                   /isolate="JK3"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Okinawa, Kume island"
FT                   /isolation_source="banana"
FT                   /db_xref="taxon:12585"
FT   CDS             103. .963
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="master-Rep"
FT                   /product="replication initiation protein"
FT                   /db_xref="GOA:Q917T5"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR013628"
FT                   /db_xref="UniProtKB/TrEMBL:Q917T5"
FT                   /protein_id="BAC97823.1"
FT                   /translation="MARYVVCWMFTINNPASLPVMRDEFKYMVYQVERGQEGTRHVQGY
FT                   VEMKRRSSLKQMRGFFPGAHLEKRKGSQEEARAYCMKEDTRIEGPFEFGAFKLSCNDNL
FT                   FDVIQDMRETHKRPLEYLYECPNTFDRSKDTLYRVQAELNKTKAMNSWKTSFNAWTSEV
FT                   ENIMAEPCYRRIIWVYGPNGGEGKTTFAKHLMKTKNAFYSPGGKSLDICRLYNYEDIVI
FT                   FDIPRCKEEYLNYGLLEEFKNGIIQSGKYEPVLKIVEYVEVIVMANFLPKEGIFSEDRI
FT                   KLVAC"
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SQ   Sequence 1104 BP; 354 A; 192 C; 279 G; 279 T; 0 other;

ab108453 Length: 1104  18-JAN-2009  Type: N  Check: 9379  ..

       1  agcgctgggg cttattatta cccccagcgc tcgggacggg acatttgcat
      51  ctataaatag acctcccccc cctccactac aagatcatca tcgtcgacag
     101  aaatggcgcg atatgtggta tgctggatgt tcaccatcaa caatcccgct
     151  tcgctaccag tgatgcggga tgagtttaaa tatatggtat atcaagtgga
     201  gaggggacag gagggtactc gtcatgtgca aggatacgtc gagatgaaga
     251  gacgaagttc tctgaagcag atgagaggct tcttcccagg cgcacacctt
     301  gagaaacgaa aggggagcca ggaagaagca cgggcgtact gtatgaagga
     351  agatacaaga atcgaaggtc ccttcgagtt tggtgctttt aaattgtcat
     401  gtaatgataa tttatttgat gtcatacagg atatgcgtga aacgcataaa
     451  cggcctctgg aatatttata tgagtgtccg aataccttcg acagaagtaa
     501  ggatacatta tacagagtgc aagcagagtt gaataaaacg aaggcgatga
     551  atagctggaa gacatccttc aatgcatgga catctgaagt agaaaatatt
     601  atggcggagc catgttatcg aaggattatt tgggtctacg gcccaaatgg
     651  aggcgaagga aagacaacgt ttgcaaaaca tttaatgaag actaagaatg
     701  cgttttattc gccaggagga aaatcattgg atatatgtag attgtataat
     751  tatgaggata tagttatatt tgatattccc agatgcaaag aggaatattt
     801  aaactatggt ttattagaag aatttaaaaa tggaattatt caaagcggga
     851  aatatgaacc cgttttgaaa attgtagaat atgtggaagt cattgtaatg
     901  gctaacttcc ttccgaagga aggaatcttt tctgaagatc gaataaagct
     951  agttgcttgc tgaacacgct atgacaatcg tacgctatga caaaagggga
    1001  aaagcaaaga ttcgggggtt gattgtgcta tcctaacgat taagggccgc
    1051  aggcccgtca agatggacga cgcgatcata tgtcccgagt tagtgcgcca
    1101  cgta