Sequence of DPV Honeysuckle yellow vein mosaic virus
Honeysuckle yellow vein mosaic virus V1, C3, C2 genes for coat protein, replication enhancer protein, transcriptional transactivator protein, complete cds, isolate: KM25.
ACC No: AB108837
Dated: 2008-06-21 | Length: 1570 | CRC: 1576446290
ID AB108837; SV 1; linear; genomic DNA; STD; VRL; 1570 BP. XX AC AB108837; XX DT 22-APR-2003 (Rel. 75, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Honeysuckle yellow vein mosaic virus V1, C3, C2 genes for coat protein, DE replication enhancer protein, transcriptional transactivator protein, DE complete cds, isolate: KM25. XX KW . XX OS Honeysuckle yellow vein mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1570 RA Takanami Y., Komuta K.; RT ; RL Submitted (18-APR-2003) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoichi Takanami Kyushu University, Graduated school of Bioresource RL and Bioenvironmental Sciences; 6-10-1, Hakozaki, Higashi-ku, Fukuoka, RL Fukuoka 812-8581, Japan XX RN [2] RA Takanami Y., Komuta K.; RT "Diversity of Honeysuckle-infecting geminivirus (HsGV) in Japan"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .1570 FT /organism="Honeysuckle yellow vein mosaic virus" FT /isolate="KM25" FT /mol_type="genomic DNA" FT /country="Japan:Kumamoto" FT /note="synonym: Honeysuckle-infecting geminivirus" FT /db_xref="taxon:180587" FT CDS 97. .870 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q80GK2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q80GK2" FT /protein_id="BAC75812.1" FT /translation="MSKRPADIGIFTPAFRARRRLNFDGPYVSRVNVPIAQGTSKKRSW FT AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE FT PSTATIKQDLRDRLQVLHKFTGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN FT HTENALLLYMACTHASDPVYATLKIRVYFYDSVQN" FT CDS complement(867. .1271) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q80GK1" FT /protein_id="BAC75813.1" FT /translation="MDSRTGDTITAAQARNGAYIWTVPNPLYFKITSHAQQPFNMDQDI FT ITVQIQFNHNLRNQLEIHKCFLSFRIWTHLHPQTSHFLKIFRTQVLKYLDNLGVISINN FT VIKAVDHVLYDVLEGTEYVQQFTDIKFKLY" FT CDS complement(1012. .1419) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="transcriptional transactivator protein" FT /db_xref="GOA:Q80GK0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q80GK0" FT /protein_id="BAC75814.1" FT /translation="MQPSSPSTAHSTQVPIKVLHRSGKRRQPRRRRTDINCGCSIYVAI FT GCANHGFTHRGHHHCSSGKEWRVYLDSAKSPIFQNHEPRPTTIQHGSGYHNCTDTIQPQ FT PQESTGDTQVLPLFQNLDSLTSSDLAFLENI" XX SQ Sequence 1570 BP; 418 A; 300 C; 366 G; 486 T; 0 other; ab108837 Length: 1570 21-JUN-2008 Type: N Check: 4788 .. 1 ttaaatacct tcttctggtt gagtctacat actctcctga tacggtgggt 51 tacgatctga tccgtgatct tataggtgtt gttcgtgcga agaattatgt 101 cgaagcgacc tgcagatata gggattttca ctcccgcatt cagggcacgt 151 cgccgtctga acttcgacgg cccgtatgtc agccgtgtga atgtccccat 201 tgcccaaggc acaagcaaaa agagatcatg ggctcaaagg cccatgtatc 251 ggaagcccag gatatacagg atgtacagaa gccctgatgt acctaagggt 301 tgtgaaggtc cctgtaaggt ccaatctttc gagaagaaag atgatgttgg 351 tcactctggt aaaatgttat gtatctctga tattactcgt ggtaatgggc 401 ttacacatcg tgttggcaag aggttttgta taaaatcagt ctatatcatt 451 ggaaagatat ggatggatga gaacattaag ctgaagaatc atactaataa 501 cgtgatcttc tggcttgtga gagataggcg ccctgtttcc gttccttatg 551 gtttccaaga ggcgtttaat atgtatgaaa atgaacctag tacagctact 601 attaaacaag atttgagaga ccgccttcag gttttacaca agttcactgg 651 tacggttaca ggtggacaat atgcgtctaa agaacaggct atgatcaagc 701 gtttctggag gttgaatcat catgtcacat acaatcacca agaggctgct 751 aaatatgaga atcatactga gaatgctttg ttattgtata tggcatgtac 801 tcatgccagt gatccagtgt atgctacatt aaaaattaga gtgtatttct 851 acgattcagt acagaattaa taaagcttga attttatatc agtaaattgt 901 tgtacatact ctgttccttc taatacatcg tacaatacat gatcaactgc 951 cttaattaca ttgttaattg aaattacacc caaattatct aaatacttca 1001 acacttgtgt cctaaatatt ttcaagaaat gcgaggtctg aggatgtaag 1051 tgagtccaaa ttctgaaaga gaggaagcac ttgtgtatct ccagttgatt 1101 cctgaggttg tggttgaatt gtatctgtac agttatgata tcctgatcca 1151 tgttgaatgg ttgttgggcg tggctcgtga ttttgaaata taggggattt 1201 ggcactgtcc agatatacgc gccattcctt gcctgagctg cagtgatggt 1251 gtcccctgtg cgtgaatcca tgatttgcgc agcctattgc gacgtatata 1301 gaacacccgc agtttatgtc agtcctcctc ctgcgtggtt gtctcctctt 1351 ccctgatctg tgtagcacct tgatgggaac ctgagtagag tgggccgtag 1401 agggtgatga aggttgcatt tttaattgcc caggccttta gggcagtatt 1451 cttgtcctcg tctaaatact cggtgtatga tgacgtagga cctggattgc 1501 agaggaagat tgtcaggata ccacctttaa tttgaattgg tttcccgtac 1551 ttggtgttgc tttgccagtc