Sequence of DPV Tomato bushy stunt virus
Tomato bushy stunt virus CP gene for coat protein, complete cds, isolate: Shiz-1.
ACC No: AB244054
Dated: 2006-11-22 | Length: 1167 | CRC: -1628643764
ID AB244054; SV 1; linear; genomic RNA; STD; VRL; 1167 BP.
XX
AC AB244054;
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DT 22-NOV-2006 (Rel. 89, Created)
DT 22-NOV-2006 (Rel. 89, Last updated, Version 1)
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DE Tomato bushy stunt virus CP gene for coat protein, complete cds, isolate:
DE Shiz-1.
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KW .
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OS Tomato bushy stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Tombusvirus.
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RN [1]
RP 1-1167
RA Natsuaki T.;
RT ;
RL Submitted (08-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL Tomohide Natsuaki, Utsunomiya University, Faculty of Agriculture;
RL Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan
RL (E-mail:natsuaki@cc.utsunomiya-u.ac.jp, Tel:81-28-649-5449,
RL Fax:81-28-649-5401)
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RN [2]
RA Fujinaga M., Morikawa T., Doi M., Yoneyama C., Ibrahim M., Ogiso H.,
RA Miyamoto K., Miyasaka M., Ohki T., Kameya-Iwaki M., Natsuaki T.;
RT "Two tombusviruses isolated from lisianthus [Eustoma grandiflorum (Raf.)
RT Shin] with necrotic stint.";
RL Nippon Shokubutsu Byori Gakkaiho 72:109-115(2006).
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FH Key Location/Qualifiers
FH
FT source 1. .1167
FT /organism="Tomato bushy stunt virus"
FT /isolate="Shiz-1"
FT /mol_type="genomic RNA"
FT /country="Japan:Shizuoka"
FT /isolation_source="lisianthus"
FT /db_xref="taxon:12145"
FT CDS 1. .1167
FT /codon_start=1
FT /transl_table=1
FT /gene="CP"
FT /product="coat protein"
FT /note="ORF3"
FT /protein_id="BAF37070.1"
FT /translation="MAMTTRNNNNVLAVSKKQLGALAASAAAGALRNYISESGPALLQS
FT AVGLGKKALNKVRNRRKQGNQQIITHVGGVGGSIMAPVAVSRQLVGSKPKFTGKTSGSV
FT TVTHREYLTQVNNSSGFVVNGGIVGNLLQLNPLNGTLFSWLPAIASNFDQYSFNNVVLH
FT YVPLCGTTEVGRVALYFDKDSQDLEPADRVELANFGVLKETAPEAEAMVRIPTDKVKRY
FT CNDSSTVDQKLIDLGQLGIATYGGAGTNAVGDVFISYSVTLYFPQPTNTLLSTRRLNLT
FT GTLAGAAGPGYLVLTRTPTVLTHTFRATGTFNLSGGLRCLTSLTLGATGAVVINDILAI
FT DNVGTASAYFLNCTVSSLPATVTFTTTGISSATVNVVRSTRANVVNLL"
XX
SQ Sequence 1167 BP; 301 A; 268 C; 300 G; 298 T; 0 other;
ab244054 Length: 1167 22-NOV-2006 Type: N Check: 6861 ..
1 atggcgatga caacgagaaa taacaacaat gtgctcgctg tgagcaagaa
51 acagttgggg gccctagcag catctgccgc tgcgggggct ctgcgtaatt
101 atattagcga gagtggcccg gcactgctac aatcagcagt gggtttggga
151 aagaaggcct taaataaggt gaggaatcga aggaaacagg gaaatcagca
201 gatcattact catgttggtg gcgttggggg ctcaatcatg gctcctgtgg
251 cggtgtccag gcaactagta ggtagtaagc cgaaatttac cggaaagaca
301 tctggatctg tcacagtaac gcaccgtgag taccttaccc aagtaaataa
351 ttcttcagga tttgtggtaa atgggggtat tgtcggcaat ttgttacaac
401 tcaacccgtt gaatggaaca ctgttctcgt ggctgcctgc catagcatcc
451 aattttgatc agtactcatt taacaacgtt gtgttacatt acgtccccct
501 gtgtggcact actgaagtag ggcgtgtagc gctatacttt gataaggact
551 cacaagatct tgagcctgct gatagagtgg agttggcgaa cttcggtgtt
601 ctaaaggaga cagccccaga ggctgaggca atggtgcgca tacccactga
651 caaagttaag agatactgta atgacagttc cacagttgat cagaaactta
701 tagatttggg acagcttggt atcgctactt atggaggagc aggtacaaat
751 gctgtggggg atgtgttcat ttcctacagt gtcacactgt actttcctca
801 acccaccaac accctgttga gtacacgacg gcttaacctt accggaactt
851 tggccggtgc tgctggacct gggtatcttg tcctgacaag aactcccaca
901 gtcttgacgc acacatttag ggcgactggc acctttaacc tctctggagg
951 tttgaggtgc ttgaccagtc tcactctcgg agcaacgggg gcagtggtta
1001 tcaatgacat acttgctatt gacaatgtgg gcacggctag tgcctacttc
1051 ctcaattgca cggtatcctc tctacctgcc accgtaacat ttacaacaac
1101 tggaatatct tccgccaccg tcaacgtggt gcgtagtaca cgagccaatg
1151 ttgttaactt actgtaa