Sequence of DPV Apple chlorotic leaf spot virus

Apple chlorotic leaf spot virus CP gene for coat protein, complete cdcs, strain: GC10h.

ACC No: AB326229

Dated: 2007-08-17 | Length: 582 | CRC: -1123816788

                
ID   AB326229; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   AB326229;
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DT   19-JUN-2007 (Rel. 92, Created)
DT   17-AUG-2007 (Rel. 92, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus CP gene for coat protein, complete cdcs,
DE   strain: GC10h.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Trichovirus.
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RN   [1]
RP   1-582
RA   Yoshikawa N., Yaegashi H.;
RT   ;
RL   Submitted (15-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   Nobuyuki Yoshikawa, Iwate University, Faculty of Agriculture; Ueda 3-18-8,
RL   Morioka, Iwate 020-8550, Japan (E-mail:yoshikawa@iwate-u.ac.jp,
RL   Tel:81-19-621-6150, Fax:81-19-621-6150)
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RN   [2]
RA   Yaegashi H., Isogai M., Tajima H., Sano T., Yoshikawa N.;
RT   "Combinations of two amino acids (Ala40 and Phe75 or Ser40 and Tyr75) in
RT   the coat protein of apple chlorotic leaf spot virus are crucial for
RT   infectivity";
RL   J. Gen. Virol. 88:2611-2618(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /sub_species="Plant virus"
FT                   /strain="GC10h"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12175"
FT   CDS             1. .582
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A6BMF8"
FT                   /db_xref="UniProtKB/TrEMBL:A6BMF8"
FT                   /protein_id="BAF64471.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLEAIFANI
FT                   AIQGTSEQTEFLDVTVEVKSMEDQKVIGSFNLKEVVNLIKIFKTTSSDPNINNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFSTMPEVGGEYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKMSSVTTDLCI"
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SQ   Sequence 582 BP; 187 A; 116 C; 143 G; 136 T; 0 other;

ab326229 Length: 582  17-AUG-2007  Type: N  Check: 8524  ..

       1  atggcagcag tgctaaatct tcagctaaaa gtggacgcag atctgaaagc
      51  gttcctggcc gcagaaggca gaccccttca tggaaagaca ggggcaatac
     101  tggaacagac attggaggcc atcttcgcga acatagcaat ccaagggacc
     151  tcggaacaga cggaattcct cgacgtgaca gtggaagtca aatccatgga
     201  ggatcagaag gtgataggtt ccttcaatct gaaggaggtg gtcaatttga
     251  taaagatctt caagactaca tcttcggatc cgaacataaa caacatgact
     301  ttccgccagg tctgtgaggc ttttgcccca gaggcaagaa atgggctggt
     351  caaactgaag tacaaagggg ttttcacaaa cctattttct actatgccag
     401  aagtcggagg ggagtacccg gagctcatgt ttgatttcaa taaagggctg
     451  aatatgttta taatgaacaa agctcagcaa aaggtgataa ctaatatgaa
     501  tcggcgtctt ttacaaactg aatttgcaaa gagcgaaaat gaagcaaaaa
     551  tgtcatctgt tacgactgat ctttgcattt ag