Sequence of DPV Cymbidium mosaic virus
Cymbidium mosaic virus CP gene for coat protein, complete cds, strain: CK26.
ACC No: AB541535
Dated: 2012-03-15 | Length: 672 | CRC: 115246230
ID AB541535; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC AB541535; XX DT 18-JAN-2010 (Rel. 103, Created) DT 15-MAR-2012 (Rel. 112, Last updated, Version 3) XX DE Cymbidium mosaic virus CP gene for coat protein, complete cds, strain: DE CK26. XX KW . XX OS Cymbidium mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; OC Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-672 RA Choi S., Yoon J., Chung B.; RT ; RL Submitted (12-JAN-2010) to the INSDC. RL Contact:Seung-Kook Choi Myong-Ji University, Bioinformatics and RL Biosciences; Namdong, Cheoin-gu, Yong-In, Gyeonggi-do 449-728, SOUTH KOREA XX RN [2] RC DOI:10.1007/s11262-011-0683-8 RA Yoon J.-Y., Chung B.-N., Choi G.-S., Choi S.-K.; RT "Genetic variability in the coat protein genes of Cymbidium mosaic virus RT isolates from orchids"; RL Virus Genes 44:323-328(2011). XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Cymbidium mosaic virus" FT /host="Cymbidium virescens" FT /lab_host="Nicotiana tabacum cv. Samsun" FT /strain="CK26" FT /mol_type="genomic RNA" FT /country="South Korea:Choong-Nam" FT /collected_by="Bong-Nam Chung" FT /collection_date="02-Oct-2007" FT /identified_by="Bong-Nam Chung" FT /db_xref="taxon:12178" FT CDS 1. .672 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q6T803" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q6T803" FT /protein_id="BAI66556.1" FT /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK FT AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF FT VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP FT AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT FT E" XX SQ Sequence 672 BP; 129 A; 243 C; 160 G; 140 T; 0 other; ab541535 Length: 672 15-MAR-2012 Type: N Check: 3443 .. 1 atgggagagc ccactccaac tcccgctgcc acttactccg ctgccgaccc 51 tacctctgca cccaagttgg ccgacctggc tgccattaag tactcacctg 101 tcacctcctc catcgccaca cccgaagaga tcaaggccat aacccaattg 151 tgggttaaca accttggcct ccccgctgac accgtaggta ccgcggccat 201 tgacctggcc cgcgcctacg ctgacgtcgg ggcgtccaag agtgctaccc 251 tactcggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc 301 gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta 351 cgcaaaagtg gtgtggaatc tgatgctggc cactaacgat ccgcccgcca 401 actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac 451 ttcttcgatg ccgtcgattc cactgccgcg ctggagcctg ctgaatggca 501 gcgtcgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg 551 gcgcccttgc gcgtcagcgt atccaaaacg gcaacctcat taccaacatt 601 gccgaggtca ccaagggcca tcttggctcc accaacactc tctatgctct 651 gcctgcaccc cctactgaat aa