Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus CP gene for coat protein, complete cds, isolate: Magelang.

ACC No: AB693985

Dated: 2012-07-24 | Length: 672 | CRC: -1667849058

                
ID   AB693985; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   AB693985;
XX
DT   24-JUL-2012 (Rel. 113, Created)
DT   24-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE   Cymbidium mosaic virus CP gene for coat protein, complete cds, isolate:
DE   Magelang.
XX
KW   .
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OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
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RN   [1]
RP   1-672
RA   Lakani I., Suastika G., Mattjik N.A., Damayanti T.A.;
RT   ;
RL   Submitted (21-JAN-2012) to the INSDC.
RL   Contact:Irwan Lakani Tadulako University, Agroteknologi; Kampus Bumi
RL   Tadulako Tondo, Palu, Central Sulawesi 94118, Indonesia
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RN   [2]
RA   Lakani I., Suastika G., Damayanti T.A., Mattjik N.A.;
RT   "Detection and Identification several plant viruses infecting orchids in
RT   Indonesia";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Cymbidium purpureum"
FT                   /isolate="Magelang"
FT                   /mol_type="genomic RNA"
FT                   /country="Indonesia"
FT                   /isolation_source="Orchids"
FT                   /collected_by="Irwan Lakani"
FT                   /identified_by="Irwan Lakani"
FT                   /db_xref="taxon:12178"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="BAM34450.1"
FT                   /translation="MGESTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
XX
SQ   Sequence 672 BP; 130 A; 239 C; 159 G; 144 T; 0 other;

ab693985 Length: 672  24-JUL-2012  Type: N  Check: 5489  ..

       1  atgggagagt ccactccaac tccagctgcc acttattccg ctgccgaccc
      51  cacttctgca cccaagttgg ccgacttggc tgccattaag tactcacctg
     101  tcacctcctc catcgccacc cccgaagaaa tcaaggccat aacccaattg
     151  tgggttaaca accttggcct ccccgccgac acagtaggta ccgcggccat
     201  tgacctggct cgcgcctacg ctgacgtcgg ggcgtccaag agtgccaccc
     251  tgcttggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc
     301  gcgcagatct ttgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatc tgatgctggc tactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgtcgattc cactgccgcg ttggagcctg ctgaatggca
     501  gcgccgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt
     601  gccgaggtca ccaagggcca tcttggctcc accaacactc tctatgctct
     651  gcctgcaccc cctactgaat aa