Sequence of DPV Saccharomyces 20S RNA narnavirus
Saccharomyces cerevisiae narnavirus 20S RNA
ACC No: AF039063
Dated: 2002-06-20 | Length: 2514 | CRC: 334722496
!!NA_SEQUENCE 1.0 ID AF039063 standard; RNA; VRL; 2514 BP. XX AC AF039063; M63893; XX SV AF039063.1 XX DT 04-JAN-1999 (Rel. 58, Created) DT 20-JUN-2002 (Rel. 72, Last updated, Version 3) XX DE Saccharomyces cerevisiae narnavirus 20S RNARNA-dependent RNA DE polymerase mRNA, complete cds. XX KW . XX OS Saccharomyces cerevisiae narnavirus 20S RNA OC Viruses; ssRNA negative-strand viruses; Narnaviridae; Narnavirus. XX RN [1] RP 1-2514 RX MEDLINE; 91286317. RX PUBMED; 2061340. RA Rodriguez-Cousino N., Esteban L.M., Esteban R.; RT "Molecular cloning and characterization of W double-stranded RNA, a linear RT molecule present in Saccharomyces cerevisiae. Identification of its RT single-stranded RNA form as 20 S RNA"; RL J. Biol. Chem. 266(19):12772-12778(1991). XX RN [2] RP 1-2514 RX MEDLINE; 98352075. RX PUBMED; 9685388. RA Rodriguez-Cousino N., Solorzano A., Fujimura T., Esteban R.; RT "Yeast positive-stranded virus-like RNA replicons. 20 S and 23 S RNA RT terminal nucleotide sequences and 3' end secondary structures resemble RT those of RNA coliphages"; RL J. Biol. Chem. 273(32):20363-20371(1998). XX RN [3] RC bases 8 to 2412 originally submitted in 1991 RP 1-2514 RA Esteban R.; RT ; RL Submitted (18-DEC-1997) to the EMBL/GenBank/DDBJ databases. RL Inst. Microbiologia Bioquimica, CSIC/Univ. Salamanca, Av. Campo Charro s/n, RL Salamanca 37007, Spain XX DR SWISS-PROT; P25328; RRPW_YEAST. XX CC On Jan 1, 1999 this sequence version replaced gi:2696974. XX FH Key Location/Qualifiers FH FT source 1. .2514 FT /db_xref="taxon:198598" FT /note="W dsRNA" FT /organism="Saccharomyces cerevisiae narnavirus 20S RNA " FT /strain="37-4C" FT CDS 13. .2502 FT /codon_start=1 FT /db_xref="SWISS-PROT:P25328" FT /product="RNA-dependent RNA polymerase" FT /protein_id="AAC98925.1" FT /translation="MKEPVDCRLSTPAGFSGTVPPPGRTKAARPGTIPVRRSRGSASAL FT PGKIYGWSRRQRDRFAMLLSSFDAALAAYSGVVVSRGTRSLPPSLRLFRAMTRKWLSVT FT ARGNGVEFAIASAKEFSAACRAGWISGTVPDHFFMKWLPEPVRRKSGLWAQLSFIGRSL FT PEGGDRHEIEALANHKAALSSSFEVPADVLTSLRNYSEDWARRHLAADPDPSLLCEPCT FT GNSATFERTRREGGFAQSITDLVSSSPTDNLPPLESMPFGPTQGQALPVHVLEVSLSRY FT HNGSDPKGRVSVVRERGHKVRVVSAMETHELVLGHAARRRLFKGLRRERRLRDTLKGDF FT EATTKAFVGCAGTVISSDMKSASDLIPLSVASAIVDGLEASGRLLPVEIAGLRACTGPQ FT HLVYPDGSEITTRRGILMGLPTTWAILNLMHLWCWDSADRQYRLEGHPFRATVRSDCRV FT CGDDLIGVGPDSLLRSYDRNLGLVGMILSPGKHFRSNRRGVFLERLLEFQTRKTVYEHA FT VIYRKVGHRRVPVDRSHIPVVTRVTVLNTIPLKGLVRASVLGRDDPPVWWAAAVAESSL FT LSDYPRKKIFAAARTLRPGLSRQFRRLGIPPFLPRELGGAGLVGPSDRVDAPAFHRKAI FT SSLVWGSDATAAYSFIRMWQGFEGHPWKTAASQETDTWFADYKVTRPGKMYPDRYGFLD FT GESLRTKSTMLNSAVYETFLGPDPDATHYPSLRIVASRLAKVRKDLVNRWPSVKPVGKD FT LGTILEAFEESKLCTLWVTPYDASGYFDDSLLLMDESVYQRRFRQLVIAGLMREGRMGD FT LLFPNWLPPSTVVSGFP" XX SQ Sequence 2514 BP; 445 A; 740 C; 725 G; 604 T; 0 other; AF039063 Length: 2514 July 2, 2002 09:24 Type: N Check: 3468 .. 1 ggggctgatc ccatgaagga accagtagac tgccgtcttt cgacgccagc 51 cggtttctcg gggacagtcc cccctcctgg tcgcactaag gcggccaggc 101 cgggaaccat ccctgtgagg cgttcgcgtg gaagcgcgtc tgccttaccg 151 ggtaaaatct acggttggag ccgtcgacaa cgggataggt tcgcgatgtt 201 gctgtcgtct ttcgacgcgg ctctcgcggc ctactccggc gtcgtcgtct 251 ccagaggtac acgctctcta ccgccatcgc tccggttatt ccgggcgatg 301 acgcgtaagt ggctttcagt gaccgcccgc gggaacgggg tcgagttcgc 351 catcgcttct gcgaaggagt tctcagccgc gtgccgcgcg ggttggattt 401 cggggaccgt tccggaccac ttctttatga agtggcttcc ggaacccgtt 451 cgccgtaaat ccgggttgtg ggcccagctt tcattcattg gacgttcgct 501 ccccgagggg ggcgaccgcc atgaaatcga ggcgttggcc aaccacaagg 551 ctgcgttgtc cagttccttt gaggttcctg cggacgtact tacgtctcta 601 aggaattact cagaggactg ggcccgccgc cacctcgctg cggatcctga 651 tccttcgctg ctctgtgagc cctgtacggg taacagcgca acgttcgaac 701 ggactcgccg cgagggtggt tttgcacaat cgatcactga cttggtttcg 751 tcctcaccca ctgacaacct ccctcccctt gagtcgatgc ccttcgggcc 801 gacccaaggc caggcgttgc cagtgcacgt gctcgaggtc tctctctctc 851 gataccacaa tggctcagac cctaagggta gagtctctgt ggtgagggag 901 agaggccaca aggtccgtgt ggtctctgca atggagactc acgaacttgt 951 actcggtcac gcggctaggc gcagactctt taagggactg cgtcgtgagc 1001 gtcgtctcag ggacaccctc aagggtgact tcgaggcgac aaccaaggcc 1051 tttgtgggtt gtgctggtac cgttatctca tcagatatga aatctgcctc 1101 ggacctcatc cctctatcgg tcgcttctgc gatcgtagat ggtctggagg 1151 cctctggtag actcctacct gtcgagatag ctggtcttcg ggcctgtact 1201 ggccctcagc acttagtcta ccctgacggt tctgaaatca ccacacggcg 1251 agggatcctt atgggactcc ccaccacgtg ggcgattctg aatctcatgc 1301 acctatggtg ctgggattct gcggatcgtc agtatagatt agagggacat 1351 cccttccgcg ccacggttag atcggattgt cgcgtttgcg gcgacgatct 1401 aatcggcgtg ggtccggact ccttactacg gtcttatgac cgcaatttgg 1451 gtctggttgg gatgatcctc tcccctggca agcacttccg cagtaacagg 1501 aggggggtct tcctcgagcg tttactcgag ttccagaccc gtaaaaccgt 1551 gtacgaacac gctgtgattt accgtaaggt aggtcaccgt cgcgtgcccg 1601 tggatcggtc tcacattccc gtcgtcaccc gagtgaccgt cctgaatacc 1651 atcccactta aagggttggt tcgggcttcg gttctcggtc gtgacgatcc 1701 tcccgtttgg tgggctgcgg ccgtggcgga gtcttcactg ctcagtgact 1751 atcctcgtaa gaagatattc gctgcagcac ggactctccg ccctggcctc 1801 tcccgccaat tcagaaggtt gggaatccca ccattcctcc cccgtgaact 1851 cgggggcgca ggcttggtcg gaccttccga tcgtgtcgac gcccctgcgt 1901 tccacaggaa agccatttct tccctggtgt ggggctctga tgccactgct 1951 gcatacagtt ttatccgtat gtggcagggg ttcgagggcc acccttggaa 2001 gacggcggcc tcacaggaga cggacacttg gttcgccgac tataaggtca 2051 cccggccggg taagatgtac ccagaccgtt acggctttct tgatggagag 2101 tctcttcgga ccaagtcaac tatgttgaac tcggccgtct atgagacttt 2151 tctcggacct gaccctgacg ccacccatta cccttccttg cgaatcgtcg 2201 ccagtagact ggcgaaggtc cggaaggatt tggtaaatcg gtggccatcg 2251 gtcaagcccg tggggaagga tcttggtacc atcttagaag ctttcgaaga 2301 gtcaaagttg tgcacccttt gggtgacacc ttacgacgct tcgggctact 2351 ttgatgattc cttgttactg atggatgaga gcgtgtacca acgtagattc 2401 cggcaactgg tcattgccgg cttgatgcgt gagggccgga tgggcgactt 2451 attgtttccc aactggcttc caccatccac cgtggtctcg ggtttcccct 2501 gaggccacgg cccc