Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus-Mild[Spain7297], complete genome.
ACC No: AF071228
Dated: 2004-04-06 | Length: 2791 | CRC: -1696514368
!!NA_SEQUENCE 1.0 ID AF071228 standard; circular genomic DNA; VRL; 2791 BP. XX AC AF071228; XX SV AF071228.1 XX DT 04-JAN-1999 (Rel. 58, Created) DT 06-APR-2004 (Rel. 79, Last updated, Version 5) XX DE Tomato yellow leaf curl virus-Mild[Spain7297], complete genome. XX KW . XX OS Tomato yellow leaf curl virus - Mild[Spain7297] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC Tomato yellow leaf curl virus. XX RN [1] RP 1-2791 RX MEDLINE; 20495162. RX PUBMED; 11038394. RA Navas-Castillo J., Sanchez-Campos S., Noris E., Louro D., Accotto G.P., RA Moriones E.; RT "Natural recombination between Tomato yellow leaf curl virus-is and Tomato RT leaf curl virus"; RL J. Gen. Virol. 81(Pt 11):2797-2801(2000). XX RN [2] RP 1-2791 RA Sanchez-Campos S., Navas-Castillo J., Moriones E.; RT ; RL Submitted (10-JUN-1998) to the EMBL/GenBank/DDBJ databases. RL Estacion Experimental 'La Mayora', CSIC, Algarrobo-Costa, Malaga 29750, RL Spain XX DR GOA; Q9WLG6. DR GOA; Q9YUX7. DR GOA; Q9YUX8. DR GOA; Q9YUY0. DR TrEMBL; Q9WLG6; Q9WLG6. DR TrEMBL; Q9YIX2; Q9YIX2. DR TrEMBL; Q9YUX7; Q9YUX7. DR TrEMBL; Q9YUX8; Q9YUX8. DR TrEMBL; Q9YUX9; Q9YUX9. DR TrEMBL; Q9YUY0; Q9YUY0. XX FH Key Location/Qualifiers FH FT source 1. .2791 FT /country="Spain" FT /db_xref="taxon:270155" FT /mol_type="genomic DNA" FT /note="whitefly transmitted; infectious clone" FT /organism="Tomato yellow leaf curl virus - Mild[Spain7297]" FT /isolate="Spain Sp7297" FT gene 155. .505 FT /gene="V1" FT CDS 155. .505 FT /codon_start=1 FT /db_xref="GOA:Q9WLG6" FT /db_xref="TrEMBL:Q9WLG6" FT /gene="V1" FT /product="pre-coat protein" FT /protein_id="AAC99357.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKH" FT gene 315. .1091 FT /gene="V2" FT CDS 315. .1091 FT /codon_start=1 FT /db_xref="GOA:Q9YUY0" FT /db_xref="TrEMBL:Q9YUY0" FT /gene="V2" FT /product="coat protein" FT /protein_id="AAC99358.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSTDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1088. .1492) FT /gene="C3" FT CDS complement(1088. .1492) FT /codon_start=1 FT /db_xref="TrEMBL:Q9YUX9" FT /gene="C3" FT /product="C3 protein" FT /protein_id="AAC99361.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLKVFRHQVLKYLDSIGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1233. .1640) FT /gene="C2" FT CDS complement(1233. .1640) FT /codon_start=1 FT /db_xref="GOA:Q9YUX8" FT /db_xref="TrEMBL:Q9YUX8" FT /gene="C2" FT /product="C2 protein" FT /protein_id="AAC99360.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYQHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1549. .2628) FT /gene="C1" FT CDS complement(1549. .2628) FT /codon_start=1 FT /db_xref="GOA:Q9YUX7" FT /db_xref="TrEMBL:Q9YUX7" FT /gene="C1" FT /product="replication associated protein" FT /protein_id="AAC99359.1" FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT gene complement(2169. .2471) FT /gene="C4" FT CDS complement(2169. .2471) FT /codon_start=1 FT /db_xref="TrEMBL:Q9YIX2" FT /gene="C4" FT /product="C4 protein" FT /protein_id="AAC99362.1" FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV FT QTSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2791 BP; 762 A; 537 C; 615 G; 877 T; 0 other; AF071228 Length: 2791 April 20, 2004 09:35 Type: N Check: 7134 .. 1 taatattacc ggatggccgc gccttttcct tttatgtggt ccccatgagg 51 gttcaacaga cgtcactgtc aaccaatcaa attgcatcct caaacgttag 101 ataagtgttc atttgtcttt atatacttgg tccccaagta gtttgtcttg 151 caatatgtgg gatccacttc taaatgaatt tcctgaatct gttcacggat 201 ttcgttgtat gttagctatt aaatatttgc agtccgttga ggaaacttac 251 gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt 301 aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg 351 cccgcctcga aggttcgccg aaggctgaac ttcgacagcc catacagcag 401 ccgtgctgct gtccccattg tccaaggcac aaacaagcga cgatcatgga 451 cgtacaggcc catgtaccgg aagcccagaa tatacagaat gtatcgaagc 501 actgatgttc cccgtggatg tgaaggccca tgtaaagtac agtcttatga 551 gcaacgggat gatattaagc atactggtat tgttcgttgt gttagtgatg 601 ttactcgtgg atctggaatt actcacagag tgggtaagag gttctgtgtt 651 aaatcgatat attttttagg taaagtctgg atggatgaaa atatcaagaa 701 gcagaaccac actaatcagg tcatgttctt cttggtccgt gatagaaggc 751 cctatggaaa cagcccaatg gattttggac aggtttttaa tatgttcgat 801 aatgagccca gtaccgcaac agtgaagaat gatttgcggg ataggtttca 851 agtgatgagg aaatttcatg ctacagttat tggtgggccc tctggaatga 901 aggaacaggc attagttaag aggtttttta gaattaacag tcatgtaact 951 tataatcatc aggaggcagc caagtacgag aaccatactg aaaacgcctt 1001 gttattgtat atggcatgta cgcatgcctc taatccagtg tatgctacta 1051 tgaaaatacg catctatttc tatgattcaa tatcaaatta ataaaattta 1101 tattttatat catgagtttc tgttacattt attgtgtttt caagtacatc 1151 atacaataca tgatcaactg ctctgattac attgttaatt gaaattacac 1201 caatactatc taaatactta agaacttgat gtctaaatac ttttaagaaa 1251 cgaccagtct gaggctgtaa tgtcgtccaa attcggaagt tgagaaaaca 1301 tttgtgaatc cccaatacct tcctgatgtt gtggttgaat cttatctgaa 1351 tggaaatgat gtcgtggttc attagaaatg gcctctggct gtgttctgtt 1401 atcttgaaat agaggggatt gtttatctcc cagataaaaa cgccattctc 1451 tgcctgagga gcagtgatga gttcccctgt gcgtgaatcc atgattgttg 1501 cagttgaggt gttggtagta tgagcagcca cagtctaggt ctatacgctt 1551 acgccttatt ggtttcttct tggctatctt gtgttggacc ttgattgata 1601 cttgcgaaca gtggctcgta gagggtgacg aaggttgcat tcttgagagc 1651 ccaatttttc aaggatatgt ttttttcttc gtctagatat tccctatatg 1701 aggaggtagg tcctggattg cagaggaaga tagtgggaat tcccccttta 1751 atttgaatgg gcttcccgta ctttgtgttg ctttgccagt ccctctgggc 1801 ccccatgaat tctttgaagt gctttaaata atgcgggtct acgtcatcaa 1851 tgacgttgta ccatgcatca ttactgtaca cctttgggct taggtctaga 1901 tgtccacata aataattatg tgggcctaga gacctggccc acattgtttt 1951 gcctgttctg ctatcaccct caatgacaat actattaggt ctccatggcc 2001 gcgcagcgga agacacgacg ttctcggaca cccatacttc aagttcatct 2051 ggaacttgat taaaagatga agataaaaag ggagaaatat aaggagccgg 2101 aggctcctga aaaattctat ctaaattact atttaaatta tgaaattgta 2151 aaatataatc tttcggtatt aattctttaa tgattctaag agcctctgac 2201 ttactgcctg agttaagagc tgcggcgtaa gcgtcattgg ctgactgctg 2251 acccccacgt gcagatcgtc cgtcgatctg aaactcaccc cagtcgacgg 2301 tgtctccgtc cttatcgaca taagacttga cgtctgaact ggatttagct 2351 ccctgaatgt ttggatggaa atgtgctgcc ctgcttgggg ataccaggtc 2401 gaagaatcgc tgattttggc acttgaattt cccttcaaat tggataagca 2451 catggagatg tggttcccca ttctcgtgga gttctctgca aactttgatg 2501 tattttttat ttgttggggt ttctaggttt tttaattggg aaagtgcttc 2551 ttctttcgtt aaggagcact taggatatgt gaggaaataa tttttgcaat 2601 ttatttggaa gcgcttaggg ggagccatat ggtcaatgag taccgattga 2651 ccaagatttt tacacttatc cctggtgtat cggtactcaa tatataggga 2701 gtaccaaatg gcatattggt aattttgtaa aagtacaatg caattcaaaa 2751 ttcaaaattc aaaaatcaaa tcattaaagc ggccatccgt a