Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus-Mild[Spain7297], complete genome.
ACC No: AF071228
Dated: 2004-04-06 | Length: 2791 | CRC: -1696514368
!!NA_SEQUENCE 1.0
ID AF071228 standard; circular genomic DNA; VRL; 2791 BP.
XX
AC AF071228;
XX
SV AF071228.1
XX
DT 04-JAN-1999 (Rel. 58, Created)
DT 06-APR-2004 (Rel. 79, Last updated, Version 5)
XX
DE Tomato yellow leaf curl virus-Mild[Spain7297], complete genome.
XX
KW .
XX
OS Tomato yellow leaf curl virus - Mild[Spain7297]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC Tomato yellow leaf curl virus.
XX
RN [1]
RP 1-2791
RX MEDLINE; 20495162.
RX PUBMED; 11038394.
RA Navas-Castillo J., Sanchez-Campos S., Noris E., Louro D., Accotto G.P.,
RA Moriones E.;
RT "Natural recombination between Tomato yellow leaf curl virus-is and Tomato
RT leaf curl virus";
RL J. Gen. Virol. 81(Pt 11):2797-2801(2000).
XX
RN [2]
RP 1-2791
RA Sanchez-Campos S., Navas-Castillo J., Moriones E.;
RT ;
RL Submitted (10-JUN-1998) to the EMBL/GenBank/DDBJ databases.
RL Estacion Experimental 'La Mayora', CSIC, Algarrobo-Costa, Malaga 29750,
RL Spain
XX
DR GOA; Q9WLG6.
DR GOA; Q9YUX7.
DR GOA; Q9YUX8.
DR GOA; Q9YUY0.
DR TrEMBL; Q9WLG6; Q9WLG6.
DR TrEMBL; Q9YIX2; Q9YIX2.
DR TrEMBL; Q9YUX7; Q9YUX7.
DR TrEMBL; Q9YUX8; Q9YUX8.
DR TrEMBL; Q9YUX9; Q9YUX9.
DR TrEMBL; Q9YUY0; Q9YUY0.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2791
FT /country="Spain"
FT /db_xref="taxon:270155"
FT /mol_type="genomic DNA"
FT /note="whitefly transmitted; infectious clone"
FT /organism="Tomato yellow leaf curl virus - Mild[Spain7297]"
FT /isolate="Spain Sp7297"
FT gene 155. .505
FT /gene="V1"
FT CDS 155. .505
FT /codon_start=1
FT /db_xref="GOA:Q9WLG6"
FT /db_xref="TrEMBL:Q9WLG6"
FT /gene="V1"
FT /product="pre-coat protein"
FT /protein_id="AAC99357.1"
FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT PEAQNIQNVSKH"
FT gene 315. .1091
FT /gene="V2"
FT CDS 315. .1091
FT /codon_start=1
FT /db_xref="GOA:Q9YUY0"
FT /db_xref="TrEMBL:Q9YUY0"
FT /gene="V2"
FT /product="coat protein"
FT /protein_id="AAC99358.1"
FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT TYRPMYRKPRIYRMYRSTDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH
FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN"
FT gene complement(1088. .1492)
FT /gene="C3"
FT CDS complement(1088. .1492)
FT /codon_start=1
FT /db_xref="TrEMBL:Q9YUX9"
FT /gene="C3"
FT /product="C3 protein"
FT /protein_id="AAC99361.1"
FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLKVFRHQVLKYLDSIGVISINN
FT VIRAVDHVLYDVLENTINVTETHDIKYKFY"
FT gene complement(1233. .1640)
FT /gene="C2"
FT CDS complement(1233. .1640)
FT /codon_start=1
FT /db_xref="GOA:Q9YUX8"
FT /db_xref="TrEMBL:Q9YUX8"
FT /gene="C2"
FT /product="C2 protein"
FT /protein_id="AAC99360.1"
FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYQHL
FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI"
FT gene complement(1549. .2628)
FT /gene="C1"
FT CDS complement(1549. .2628)
FT /codon_start=1
FT /db_xref="GOA:Q9YUX7"
FT /db_xref="TrEMBL:Q9YUX7"
FT /gene="C1"
FT /product="replication associated protein"
FT /protein_id="AAC99359.1"
FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK
FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV
FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH
FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL
FT FASINQGPTQDSQEETNKA"
FT gene complement(2169. .2471)
FT /gene="C4"
FT CDS complement(2169. .2471)
FT /codon_start=1
FT /db_xref="TrEMBL:Q9YIX2"
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="AAC99362.1"
FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV
FT QTSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN"
XX
SQ Sequence 2791 BP; 762 A; 537 C; 615 G; 877 T; 0 other;
AF071228 Length: 2791 April 20, 2004 09:35 Type: N Check: 7134 ..
1 taatattacc ggatggccgc gccttttcct tttatgtggt ccccatgagg
51 gttcaacaga cgtcactgtc aaccaatcaa attgcatcct caaacgttag
101 ataagtgttc atttgtcttt atatacttgg tccccaagta gtttgtcttg
151 caatatgtgg gatccacttc taaatgaatt tcctgaatct gttcacggat
201 ttcgttgtat gttagctatt aaatatttgc agtccgttga ggaaacttac
251 gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt
301 aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg
351 cccgcctcga aggttcgccg aaggctgaac ttcgacagcc catacagcag
401 ccgtgctgct gtccccattg tccaaggcac aaacaagcga cgatcatgga
451 cgtacaggcc catgtaccgg aagcccagaa tatacagaat gtatcgaagc
501 actgatgttc cccgtggatg tgaaggccca tgtaaagtac agtcttatga
551 gcaacgggat gatattaagc atactggtat tgttcgttgt gttagtgatg
601 ttactcgtgg atctggaatt actcacagag tgggtaagag gttctgtgtt
651 aaatcgatat attttttagg taaagtctgg atggatgaaa atatcaagaa
701 gcagaaccac actaatcagg tcatgttctt cttggtccgt gatagaaggc
751 cctatggaaa cagcccaatg gattttggac aggtttttaa tatgttcgat
801 aatgagccca gtaccgcaac agtgaagaat gatttgcggg ataggtttca
851 agtgatgagg aaatttcatg ctacagttat tggtgggccc tctggaatga
901 aggaacaggc attagttaag aggtttttta gaattaacag tcatgtaact
951 tataatcatc aggaggcagc caagtacgag aaccatactg aaaacgcctt
1001 gttattgtat atggcatgta cgcatgcctc taatccagtg tatgctacta
1051 tgaaaatacg catctatttc tatgattcaa tatcaaatta ataaaattta
1101 tattttatat catgagtttc tgttacattt attgtgtttt caagtacatc
1151 atacaataca tgatcaactg ctctgattac attgttaatt gaaattacac
1201 caatactatc taaatactta agaacttgat gtctaaatac ttttaagaaa
1251 cgaccagtct gaggctgtaa tgtcgtccaa attcggaagt tgagaaaaca
1301 tttgtgaatc cccaatacct tcctgatgtt gtggttgaat cttatctgaa
1351 tggaaatgat gtcgtggttc attagaaatg gcctctggct gtgttctgtt
1401 atcttgaaat agaggggatt gtttatctcc cagataaaaa cgccattctc
1451 tgcctgagga gcagtgatga gttcccctgt gcgtgaatcc atgattgttg
1501 cagttgaggt gttggtagta tgagcagcca cagtctaggt ctatacgctt
1551 acgccttatt ggtttcttct tggctatctt gtgttggacc ttgattgata
1601 cttgcgaaca gtggctcgta gagggtgacg aaggttgcat tcttgagagc
1651 ccaatttttc aaggatatgt ttttttcttc gtctagatat tccctatatg
1701 aggaggtagg tcctggattg cagaggaaga tagtgggaat tcccccttta
1751 atttgaatgg gcttcccgta ctttgtgttg ctttgccagt ccctctgggc
1801 ccccatgaat tctttgaagt gctttaaata atgcgggtct acgtcatcaa
1851 tgacgttgta ccatgcatca ttactgtaca cctttgggct taggtctaga
1901 tgtccacata aataattatg tgggcctaga gacctggccc acattgtttt
1951 gcctgttctg ctatcaccct caatgacaat actattaggt ctccatggcc
2001 gcgcagcgga agacacgacg ttctcggaca cccatacttc aagttcatct
2051 ggaacttgat taaaagatga agataaaaag ggagaaatat aaggagccgg
2101 aggctcctga aaaattctat ctaaattact atttaaatta tgaaattgta
2151 aaatataatc tttcggtatt aattctttaa tgattctaag agcctctgac
2201 ttactgcctg agttaagagc tgcggcgtaa gcgtcattgg ctgactgctg
2251 acccccacgt gcagatcgtc cgtcgatctg aaactcaccc cagtcgacgg
2301 tgtctccgtc cttatcgaca taagacttga cgtctgaact ggatttagct
2351 ccctgaatgt ttggatggaa atgtgctgcc ctgcttgggg ataccaggtc
2401 gaagaatcgc tgattttggc acttgaattt cccttcaaat tggataagca
2451 catggagatg tggttcccca ttctcgtgga gttctctgca aactttgatg
2501 tattttttat ttgttggggt ttctaggttt tttaattggg aaagtgcttc
2551 ttctttcgtt aaggagcact taggatatgt gaggaaataa tttttgcaat
2601 ttatttggaa gcgcttaggg ggagccatat ggtcaatgag taccgattga
2651 ccaagatttt tacacttatc cctggtgtat cggtactcaa tatataggga
2701 gtaccaaatg gcatattggt aattttgtaa aagtacaatg caattcaaaa
2751 ttcaaaattc aaaaatcaaa tcattaaagc ggccatccgt a