Sequence of DPV Chino del tomate virus
Chino del tomate virus-[IC] component A AV1 protein, AC3 protein, AC2 protein, AC1 protein, and AC4 protein genes, complete cds.
ACC No: AF101476
Dated: 2005-04-15 | Length: 2634 | CRC: -1155427304
!!NA_SEQUENCE 1.0
ID AF101476 standard; circular genomic DNA; VRL; 2634 BP.
XX
AC AF101476;
XX
SV AF101476.1
XX
DT 12-MAR-1999 (Rel. 59, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Chino del tomate virus-[IC] component A AV1 protein, AC3 protein, AC2
DE protein, AC1 protein, and AC4 protein genes, complete cds.
XX
KW .
XX
OS Chino del tomate virus-[IC]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2634
RA Jiang H., Hou Y.-M., Guzman P., Gilbertson R.L.;
RT "Complete nucleotide sequence of the infectious clone of tomato leaf
RT crumple geminivirus";
RL (in) Unknown A. (eds.);
RL ANNUAL MEETING OF THE AMERICAN PHYTOPATHOLOGICAL SOCIETY, PHYTOPATHOLOGY,
RL VOL 88 (SUPPL):44-0;
RL Unknown publisher (1998)
XX
RN [2]
RP 1-2634
RA Jiang H., Hou Y.-M., Guzman P., Gilbertson R.L.;
RT ;
RL Submitted (26-OCT-1998) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of California, Davis, One Shields Ave., Davis,
RL CA 95616, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .2634
FT /chromosome="component A"
FT /db_xref="taxon:222455"
FT /mol_type="genomic DNA"
FT /organism="Chino del tomate virus-[IC]"
FT CDS 218. .973
FT /codon_start=1
FT /db_xref="GOA:Q77SN5"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q77SN5"
FT /product="AV1 protein"
FT /protein_id="AAD17902.1"
FT /translation="MPKRDLPWRSIAGTSKVSRNANYSPRGGSGPRINKAAEWVNRPMY
FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHTGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSIMN"
FT CDS complement(970. .1368)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q9YL76"
FT /product="AC3 protein"
FT /protein_id="AAD17900.1"
FT /translation="MDSRTGEFITVPQAENGVYIWEIENPLYFKMYKVEDLPYTRTRVY
FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMIASGSTYLARFRHLVNMYLDQLGVISINN
FT VIRAVRFATDRSYVSYVLENHSIKFKLY"
FT CDS complement(1115. .1504)
FT /codon_start=1
FT /db_xref="GOA:Q9YL75"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q9YL75"
FT /product="AC2 protein"
FT /protein_id="AAD17899.1"
FT /translation="MRSSSPSHPPSIKTAHRQAKKRAIRRRRIDLRCGCSIYFHIGCTG
FT HGFTHRGIHHCTSGGEWRVYLGDRKSPLFQDVQSGGSTVYENQGLPRSDTVQPQPEESV
FT ASPQSLPELPSLDDIDDSFWVDLFS"
FT CDS complement(1416. .2501)
FT /codon_start=1
FT /db_xref="GOA:Q9YL74"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9YL74"
FT /product="AC1 protein"
FT /protein_id="AAD17898.1"
FT /translation="MPSVKRFKVSAKNYFLTYPQCSLSKEEALSQLQTLKTPVNKKYIK
FT ICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTVEWGEFQIDGRSARGGQQSANDSYAKALNAGSVQSAMAVLKEEQPKDFVLHNH
FT NIRSNLERIFAKAPERWVPPFQLSSFTNVPDEMQEWADDYFGRGSAARPERPISIIVEG
FT DSRTGKTMWARALGPHNYLSGHLDFNPKVYSNEVEYNVIDDVAPHYLKLKHWKELLGAQ
FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLNKEENASLRNWTIKNAIFITLT
FT SALYQDSAQASQEKGHQEEAD"
FT CDS complement(2087. .2350)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q9YL73"
FT /product="AC4 protein"
FT /protein_id="AAD17901.1"
FT /translation="MRMGSLISTFSSNSKGSTSARITDSSIWSPQPGQHISIRTYRELN
FT PAPTSSPTSTRTEIQLSGENSRSTADQLEEVSNLLTTHMPRR"
XX
SQ Sequence 2634 BP; 647 A; 608 C; 626 G; 753 T; 0 other;
AF101476 Length: 2634 April 19, 2005 08:55 Type: N Check: 3709 ..
1 accggatggc cgcgcgattt ttcccccctt gtacgtggac ggtcacgatt
51 gtctctttcc gcccgcacgc tcctctttaa tttgaattaa agctctccgc
101 tttcgtctcg tccaatcatg taacgcctga cgagcttaga tatttttaac
151 tacttgggct cgaagtagtt atcgttataa attaaagagg cttttggccc
201 actgaattca attcaaaatg cctaagcgcg atctaccctg gcgctcgatc
251 gcgggaactt cgaaggtgag ccgcaatgcc aattattccc ctcgtggagg
301 aagtgggcct cgaattaaca aggccgctga atgggttaac aggcccatgt
351 acaggaagcc caggatctac cggacgctga gaacgcctga cgttccaaga
401 ggatgtgaag gcccatgtaa ggtccagtcc tatgaacagc gccacgatat
451 ttcacataca ggtaaggtta tgtgcatatc cgacgtgaca cgtggtaatg
501 gtatcactca ccgtgtgggt aagcgtttct gtgttaagtc tgtgtacatt
551 ctcggtaaga tctggatgga tgagaacatc aagctgaaga accacacgaa
601 tagtgttatg ttctggttgg tcagggatcg tagaccgtat ggcactccca
651 tggatttcgg tcaagtgttc aacatgtttg acaacgagcc cagcactgct
701 acggtgaaga acgatctacg cgatcgattc caggtcatgc acaaattcta
751 tgggaaggtg acaggtggac agtatgccag caacgagcag gcgatagtca
801 agcgcttctg gaaggtcaac aatcatgtgg tctacaatca tcaagaggct
851 ggcaagtacg agaatcatac ggagaacgct ttgttattgt acatggcatg
901 tacgcatgcc tctaaccctg tatatgcaac gcttaagatc cggatctact
951 tctatgattc gatcatgaat taataaagtt tgaattttat tgaatgattt
1001 tccagtacat aactaacata cgacctgtct gttgcgaaac gaacagctct
1051 gattacattg ttaatggaaa taacgcctaa ctgatctaaa tacatattaa
1101 ctaaatgtct aaacctagct aaataggtcg acccagaagc tatcatcgat
1151 gtcgtccaga cttggaagtt caggtaggct ttgtggagat gcaacgctct
1201 cctcaggttg tggttgaacc gtatctgaac gtggtaaacc ctggttctcg
1251 tatacggtag atcctccact ttgtacatct tgaaatagag gggattttct
1301 atctcccaga tatacacgcc attctccgcc tgaggtacag tgatgaattc
1351 ccctgtgcgt gaatccatgc cccgtgcagc ctatgtggaa gtatatggag
1401 cacccgcacc gtaaatcaat ccgcctcctc ctgatggccc ttttcttggc
1451 ttgcctgtgc gctgtcttga tagagggcgg atgtgagggt gatgaagatc
1501 gcattcttta tggtccaatt tctcagtgat gcgttttcct ctttgttgag
1551 gaaatcttta tagctggcac cctcaccagg attgcaaagc acgattgctg
1601 ggatccctcc tttaatttga actggcttac cgtacttgca attggattgc
1651 cagtccttct gggcccccag aagttccttc cagtgcttta actttagata
1701 gtgcggtgcg acgtcatcaa tgacgttata ctccacttcg ttcgagtaga
1751 cctttgggtt gaagtccaga tgaccactta ggtaattatg tgggcctaat
1801 gccctagccc acatcgtctt ccctgtcctc gaatcacctt ccacgatgat
1851 actaataggt ctttccggcc gcgcagcgga acctcttcca aaataatcat
1901 ccgcccactc ttgcatctcg tctggaacgt tagtgaacga agagagttga
1951 aacggaggaa cccaccgttc cggagccttt gcgaatattc tctctaggtt
2001 ggagcggatg ttatgattat gcaggacaaa atcttttggc tgctcttcct
2051 ttaaaaccgc catggcagat tgaacagatc ctgcattcaa cgccttggca
2101 tatgagtcgt tagcagattg ctgacctcct ctagctgatc tgccgtcgat
2151 ctggaattct ccccactcaa ctgtatctcc gtccttgtcg atgtaggact
2201 tgacgtcgga gctggattta gctccctgta tgttcggatg gaaatgtgct
2251 gaccgggttg gggagaccag atcgaagaat ctgttattcg tgcactggta
2301 cttcccttcg aattggatga gaacgtggag atgaggctcc ccattctcat
2351 gtaactctct gcaaatcttg atgtatttct tgttaactgg cgtttttagg
2401 gtttgtaatt gggaaagtgc ttcttctttg ctaagagagc actggggata
2451 tgtgaggaaa tagtttttgg ctgagacttt gaaacgttta accgatggca
2501 tttttgtaat aagatgggtg tactccgatt gagctctcaa acttctgtgc
2551 tatgttttgg ggtaaagggg acaatatata ctagaactct tagtagcact
2601 ttagcgacac gtggcggcca tccgatataa tatt