Sequence of DPV Potato virus X
Potato virus X strain Taiwan, complete genome.
ACC No: AF272736
Dated: 2005-08-26 | Length: 6451 | CRC: 1899526547
!!NA_SEQUENCE 1.0 ID AF272736 standard; genomic RNA; VRL; 6451 BP. XX AC AF272736; XX SV AF272736.2 XX DT 13-SEP-2000 (Rel. 65, Created) DT 26-AUG-2005 (Rel. 85, Last updated, Version 2) XX DE Potato virus X strain Taiwan, complete genome. XX KW . XX OS Potato virus X OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT "Potato virus X Taiwan strain sequence"; RL Unpublished. XX RN [2] RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT ; RL Submitted (26-MAY-2000) to the EMBL/GenBank/DDBJ databases. RL Graduate Institute of Agricultural Biotechnology, 250, Kuo-Kuang Road,, RL Taichung 40227, Taiwan XX RN [3] RC Sequence update by submitter RP 1-6451 RA Liao J.-T., Hsu Y.-H.; RT ; RL Submitted (22-AUG-2005) to the EMBL/GenBank/DDBJ databases. RL Graduate Institute of Agricultural Biotechnology, 250, Kuo-Kuang Road,, RL Taichung 40227, Taiwan XX CC On Aug 24, 2005 this sequence version replaced gi:10048274. XX FH Key Location/Qualifiers FH FT source 1. .6451 FT /db_xref="taxon:12183" FT /mol_type="genomic RNA" FT /virion FT /organism="Potato virus X" FT /strain="Taiwan" FT CDS 85. .4455 FT /codon_start=1 FT /note="RdRp" FT /product="RNA-dependent RNA polymerase" FT /protein_id="AAZ82034.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDGLLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPSYAVNAEEDLAAIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAVKKAKRLAEIQGSMRAEGEAESNEMSGGMGAIPSNAELPSTSDARQELTLPIT FT KPVPARWEDASSTDSSVEEEQVKLPGKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQATSWGEYLTGKIESLNERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSTNVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALKEYEPAEAEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT CDS 4486. .5166 FT /codon_start=1 FT /db_xref="GOA:Q9E2G9" FT /db_xref="InterPro:IPR000606" FT /db_xref="InterPro:IPR005829" FT /db_xref="UniProtKB/TrEMBL:Q9E2G9" FT /note="TGBp1" FT /product="triple-gene-block protein 1" FT /protein_id="AAG12333.2" FT /translation="MDILIISLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIASCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEEAETTLSRHGVEFVKPCQVTGLEFKVVTIVSASPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5147. .5494 FT /codon_start=1 FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77RX1" FT /note="TGBp2" FT /product="triple-gene-block protein 2" FT /protein_id="AAG12334.2" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TYACGNNHSSH" FT CDS 5427. .5639 FT /codon_start=1 FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q85247" FT /note="TGBp3" FT /product="triple-gene-block protein 3" FT /protein_id="AAG12335.2" FT /translation="MEVNTYLNAIILMLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT RKLDAETIRAIADLKPLSVERLSFH" FT CDS 5650. .6363 FT /codon_start=1 FT /db_xref="GOA:Q77LU0" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q77LU0" FT /note="CP" FT /product="coat protein" FT /protein_id="AAG12336.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 6451 BP; 1994 A; 1519 C; 1472 G; 1466 T; 0 other; AF272736 Length: 6451 August 30, 2005 08:46 Type: N Check: 4202 .. 1 gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt 51 gttacacacc cgcttgaaaa agaaagtcta acaaatggcc aaagtgcgcg 101 aggtttacca atcctttaca gactccacca caaaaactct catccaagat 151 gaggcttata gaaatattcg tcccatcatg gaaaaacata aactagctaa 201 cccgtacgct caaacggttg aagcggctaa tgatctagag gggttcggca 251 tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag 301 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga 351 acctgttaca tttatgttcc ttaagcccag gaagctaaac tatatgagaa 401 gaaacccgcg gattaaggac attttccaca atgttgctat tgaaccaaga 451 gacgtagcaa ggtaccccaa ggaaacaata attgacaaac tcacagagat 501 cacaacggac acagcatata ttagtgacac tctgcacttc ctggatccaa 551 gctacatagt ggagacattc cagaactgcc caaaactgca aacattgtat 601 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca 651 cccaaacata tacagcctca aatacttcgg agatggtttc cagtatatac 701 caggcaacca tggtggtgga gcataccatc atgaatttgc tcatttacaa 751 tggctcaaag tgggaaagat caagtggagg gaccccaagg atggccttct 801 cggacatctc aattacacga ctgagcaggt tgagatgcac acagtgacag 851 tgcagttgca ggaatcgttc gcggcaaacc atttgtactg catcagaaga 901 ggggacttgc tcacaccgga ggtgcgcact ttcggccaac ctgacaggta 951 tgtgattcca ccacagatct ttctcccgaa agttcacaac tgcaagaagc 1001 cgattcttaa gaaaactatg atgcagctct tcttgtatgt taggacagtc 1051 aaggtcgcaa aaaattgtga catttttgcc aaagtcagac aattaattaa 1101 atcatctgac ttggacaaat attctgccgt ggaactggtt tacctagtaa 1151 gctatatgga gttcctggct gatttacaag ctaccacctg cttctcagac 1201 acactttctg gtggcttgct aacaaagacc cttgcaccgg taagagcttg 1251 gatacaagag aaaaagatgc agctgtttgg tcttgaggac tacgcgaagt 1301 tagtcaaagc agttgatttc cacccggtgg atttctcttt taaagtggaa 1351 acttgggact tcagattcca ccccttgcaa gcgtggaaag ccttccgacc 1401 aagggaagtg tcggatgtag aggaaatgga gagtttgttc tcagatgggg 1451 acctgcttga ttgcttcaca agaatgccat cttacgcagt aaacgcagag 1501 gaagatttag ctgcaatcag gaaaacgcct gagatggatg tcggccaaga 1551 agttaaagaa cctgcaggag acaggaatca atactcaaac cctgcagaaa 1601 ctttcctcaa caagctccac aggaaacaca gtagggaggt gaaacatcag 1651 gccgtaaaga aagctaaacg cctagctgaa atccaggggt ccatgagagc 1701 tgaaggtgag gccgagtcaa atgagatgag cggaggcatg ggggcaatac 1751 ctagcaacgc cgaacttcct agcacgagtg atgcccgaca agaactcaca 1801 ctcccaatca ccaaacctgt ccctgcaagg tgggaagatg cttcatccac 1851 agattctagt gtggaagagg agcaggtgaa actccctgga aaagaagccg 1901 ttgagacagc aacacaacaa gttatcgaag gactcccttg gaaacactgg 1951 attcctcaac taaatgctgt tgggtttaag gcactggaaa ttcagaggga 2001 tagaagtgga acaatgatca tgcccatcac agaaatggtc tccgggttgg 2051 agaaagagga cttcccggaa ggaactccaa aagagttggc acgagaattg 2101 ctcgccatga acagaagccc tgccaccatc cctttggacc tgcttagagc 2151 cagagactac ggcagtgatg tgaagaataa gagaattggt gccatcacaa 2201 agacacaagc aacaagctgg ggcgagtacc taacaggaaa gatagagagc 2251 ctgaatgaga ggaaagttgc gacttgtgtc attcatggag ctggaggctc 2301 tggaaaaagt catgccattc agaaggcatt gagagaaatt ggcaagggct 2351 cagacatcac tgtagtcctg ccgaccaatg aactgcgact agattggagt 2401 aagaaggtgc ccaacactga accgtacatg ttcaagacct atgaaaaggc 2451 gttaattggg ggaacaggca gcatagtcat ctttgacgat tactcaaaac 2501 ttcctcccgg ttacatagaa gccttaatct gtttttactc caagatcaag 2551 ctagtcattc taacaggaga tagcagacag agcgtctacc atgaaactgc 2601 agaggacgcc tctatcaggc atttgggacc agcgacagag tacttctcaa 2651 aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt 2701 gcgaacatgc tcggtgtcta cagtgagagg acgggagtta ccgaaatcag 2751 catgagcgcc gagttcttag aaggaatccc aactttggta ccctcggatg 2801 aaaagagaag gctgtacatg ggtaccggga ggaatgacac gttcacatac 2851 gctggatgcc aggggctaac taagccgaaa gtacaaatag tgctggacca 2901 caacacccaa gtgtgtagca cgaatgtgat gtacacggca ctttctagag 2951 ccaccgacag gattcacttc gtgaacacaa gtgcaaactc ttcggccttt 3001 tgggaaaagt tagacagcac cccttatctc aagactttcc tatcagtggt 3051 gagagaacaa gcactcaagg agtacgagcc ggcagaggca gagccaattc 3101 gagagcctga gccccagaca cacatgtgtg tcgaaaatga ggagtccgtg 3151 ctagaagagt acaaagagga actcttggaa aagtttgaca gagagatcca 3201 ctctgaatcc catggccatt caaactgtgt ccaaactgaa gacacaacca 3251 ttcagttgtt ctcgcatcaa caagcaaaag atgagaccct cctctgggcg 3301 accatagatg cgcggctcaa gaccagcaat caagaaacaa acttccgaga 3351 attcttgagc aagaaggaca ttggggacgt tctgtttttg aactaccaaa 3401 aagctatggg tttgcccaaa gaacgtattc ctttttcaca agaggtctgg 3451 gaagcttgtg cccatgaagt acaaagcaag tacctcagta agtcgaagtg 3501 caacttgatc aatgggactg tgagacagag cccagacttt gatgaaaaca 3551 aaattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaaacta 3601 ggtctaccca agattaagcc aggtcaaacc atagcagctt tttatcagca 3651 gactgtgatg ctttttggaa ctatggctag gtacatgcga tggttcagac 3701 aggctttcca gccaaaagaa gtcttcataa actgtgagac cacgccagaa 3751 gacatgtctg catgggcctt gaacaactgg aatttcagta gacctagctt 3801 ggctaatgat tacacagcct tcgaccagtc tcaggatgga gctatgttgc 3851 aatttgaggt gctcaaagct aagcaccact gcataccaga ggaaattatc 3901 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt 3951 gtcaattatg cgcctgactg gtgaaggtcc cacctttgat gcaaacactg 4001 agtgcaacat agcttacacc catacaaagt ttgacatccc ggccggaact 4051 gctcaagttt atgcaggaga cgactcagca ctggactgcg ttccagaagt 4101 gaagcatagt ttccacaggc ttgaagacaa attactcctc aagtcgaagc 4151 ccgtaatcac gcaacaaaag aaaggcagtt ggcctgagtt ttgtggttgg 4201 ctgattacac caaaaggggt aatgaaagac ccaattaagc tccatgttag 4251 cttaaaattg gccgaagcta agggtgaact caagaaatgt caagattcct 4301 atgaaattga tctgagttat gcctatgacc acaaggactc tctacatgac 4351 ctgttcgatg agaaacagtg tcaggcacat acactcactt gcaggacact 4401 aatcaagtca gggagaggca ctgtctcact tccccgcctc agaaactttc 4451 tttaaccgtt aagttacctt atagatttga ataagatgga tattctcatc 4501 attagtttga aaagtttagg ttattctagg acttctaaat ctttagactc 4551 aggacctttg gtagtacatg cagtagccgg agccggtaag tccacagccc 4601 taaggaagtt gatcctcaga cacccaacat tcaccgtgca tacactcggg 4651 gtccctgaca aggtgagtat cagaactaga ggcatacaga agccaggacc 4701 tattcctgag ggcaatttcg caatcctcga tgagtatact ttggacaaca 4751 ccacaaggaa ctcataccag gcactttttg ctgaccctta tcaggcacct 4801 gagtttagcc tagagcccca cttttacttg gaaacatcat ttcgagttcc 4851 gaggaaagtg gcagatttga tagcaagctg tggcttcgat ttcgagacca 4901 actcacagga ggaagggcac ttagagatca ctggtatatt caaagggccc 4951 ctacttggga aggtgatagc cattgacgag gaggctgaga caacgctgtc 5001 caggcatggt gttgagtttg ttaagccctg ccaagtgact ggacttgaat 5051 tcaaagtagt cactattgtg tctgcctcac caatagagga aattggccag 5101 tccacagctt tctacaacgc catcaccagg tcaaagggat tgacatatgt 5151 ccgcgcaggg acatagactg accgctccgg tcaattctga aaaagtgtac 5201 atagtattag gtctatcatt tgctttagtt tcaattacct ttctgctttc 5251 tagaaatagt ttaccccacg tcggtgacaa cattcacagc ttaccacacg 5301 gaggagctta cagagacggc accaaagcaa tcttgtacaa ctccccaaat 5351 ttagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc 5401 cgttttgcta ctgactttgc tgatctatgg aagtaaatac atatctcaac 5451 gcaatcatac ttatgcttgt ggtaacaatc atagcagtca ttagtacttc 5501 cttagtgagg actgaacctt gtgtcatcaa gattactgga gaatcaatca 5551 cagtgttggc ccgcaaatta gacgcagaaa ctatcagagc cattgccgat 5601 ctcaagccac tctccgttga acggttaagt ttccattgat actcgaaaga 5651 tgtcagcacc agctagcaca acacaggcca cagggtcaac tacttcaact 5701 accacgaaaa ctgcaggcgc aactcctgcc acagcttcag gactgtttac 5751 catcccggat ggggatttct ttagtacagc ccgtgccata gtagccagca 5801 atgccgttgc aacaaatgag gacctcagta agattgaggc tatttggaag 5851 gacatgaagg tgcctacaga cactatggca caggctgctt gggacttagt 5901 cagacactgt gctgatgtgg gctcatctgc tcaaacagaa atgatagata 5951 caggtcccta ttccaacggc atcagcagag ctagactggc agcagcgatc 6001 aaagaggttt gcacacttag gcaattttgc atgaagtatg ccccagtggt 6051 atggaactgg atgttgacta acaacagtcc acctgctaac tggcaagcac 6101 aaggtttcaa gcctgagcac aaattcgctg cattcgactt ctttaatgga 6151 gtcactaacc cagctgccat catgcccaaa gaggggctca tccggccacc 6201 gtctgaagct gaaatgaatg ctgcccaaac tgctgccttt gtgaagatta 6251 cgaaggccag ggcacaatcc aacgactttg ccagcttaga tgcagctgtc 6301 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct 6351 tccaccacca taactacgtc tacataaccg acgcctaccc cagtttcata 6401 gtattttctg gtttgattgt atgaataata taaataaaaa aaaaaaaaaa 6451 a