Sequence of DPV Melon chlorotic leaf curl virus
Melon chlorotic leaf curl virus-[Guatemala] component A, complete sequence.
ACC No: AF325497
Dated: 2005-04-15 | Length: 2662 | CRC: -357819651
!!NA_SEQUENCE 1.0
ID AF325497 standard; genomic DNA; VRL; 2662 BP.
XX
AC AF325497;
XX
SV AF325497.1
XX
DT 02-AUG-2001 (Rel. 68, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 5)
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DE Melon chlorotic leaf curl virus-[Guatemala] component A, complete sequence.
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KW .
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OS Melon chlorotic leaf curl virus-[Guatemala]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2662
RA Brown J.K., Idris A.M., Rogan D., Hussein M.H., Palmieri M.;
RT "Melon chlorotic leaf curl virus, a new Begomovirus associated with Bemisia
RT tabaci infestations in Guatemala";
RL Plant Dis. 85:1027-1027(2001).
XX
RN [2]
RP 1-2662
RA Brown J.K., Idris A.M., Rogan D., Hussein M.H., Palmieri M.;
RT ;
RL Submitted (01-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2662
FT /country="Guatemala"
FT /db_xref="taxon:223286"
FT /mol_type="genomic DNA"
FT /organism="Melon chlorotic leaf curl virus-[Guatemala]"
FT /segment="A"
FT CDS 206. .961
FT /codon_start=1
FT /db_xref="GOA:Q91N04"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q91N04"
FT /note="capsid protein"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AAK83146.1"
FT /translation="MVKRDAPWRLMAGTSKVSRSANYSPRGGMGPKFNKAAAWVNRPMY
FT RKPRIYRTLRGPDIPKGCEGPCKVQSFEQRHDISHIGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRYQVLHRFYAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAAKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(958. .1362)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q91N03"
FT /note="viral replication enhancer"
FT /gene="AC3"
FT /product="replicase-associated protein"
FT /protein_id="AAK83149.1"
FT /translation="MVMDLRTWEDITVYQAENSVFIWEVPNPLYFKIYKVEDPLYTHTR
FT IYHIQIRFNHNLRRALNLHKAYLNFQVWTESIRASGTTYLNRFKHLVMLYLDRLGVIGL
FT NNVIRAVSWATDRSYVNYVIENHIIKFNVY"
FT CDS complement(1103. .1498)
FT /codon_start=1
FT /db_xref="GOA:Q91N02"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q91N02"
FT /note="AV1 and BV1 transactivator"
FT /gene="AC2"
FT /product="transactivation protein"
FT /protein_id="AAK83148.1"
FT /translation="MPNSSSSTAPSIKAQHKIAKTRAIRRRRIDLNCGCSIFLHLSCQK
FT NGNGFTHLGRHHCVSGGEFRFYLGSSKSPLFQDIQSGGSTVYAHKNIPHTNPIQPQPAE
FT SAKSSQSIPELPSLDGIDSSFWDDLFK"
FT CDS complement(1440. .2519)
FT /codon_start=1
FT /db_xref="GOA:Q91N01"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q91N01"
FT /note="contains nicking and ligase activity"
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="AAK83147.1"
FT /translation="MPQNPKSFRLSARNIFLTYPKCDVPKDEVLEILQGLSWSVVKPTY
FT IRVAREEHADGFPHLHCLVQLSGKSNIKDAGFFDITHPRRSARFHPNIQAAKDTNAVKN
FT YITKEGDYCEFGQYKVSGGSKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNI
FT TANVDRLFHKPPMPWVPPYELSSFTNVPEELKDWADHYFNECSAARPFLIKESNNVCNR
FT PISVIIEGDSRTGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKH
FT WKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKEFLDKAENAALREWTLK
FT NAQFIFLDCPLYQSTTQDR"
XX
SQ Sequence 2662 BP; 718 A; 557 C; 589 G; 798 T; 0 other;
AF325497 Length: 2662 April 19, 2005 08:55 Type: N Check: 1158 ..
1 accggatggc cgcccttttt tggtgtccta cactttatcc caggcccaag
51 cccaaagcaa ccacaacctt tacttttcta tgggaccact ataattattc
101 caacctatca aatcgctcca gtacagtcta tataattatg ccttggtgag
151 tcagcgtggt ccctataaat gaaagcagtc taaacccata cctctttaat
201 tcgaaatggt taagagggat gccccatggc gtttaatggc ggggacctcc
251 aaggtttccc gctctgctaa ttattcgcct cgtggaggta tgggccctaa
301 attcaataag gccgctgcat gggttaatag gcccatgtac aggaagccca
351 gaatttatcg cacgttacga ggtcctgaca tccccaaagg atgtgaagga
401 ccatgcaagg ttcaatcatt tgagcagcgg catgatatct ctcatattgg
451 taaggttatg tgtatttctg acgtgacgcg tggcaatggt attactcacc
501 gcgtcggcaa gcgtttttgt gttaagtctg tatatatttt aggcaagata
551 tggatggacg aaaacatcaa gctgaagaat cacacaaaca gtgtgatgtt
601 ttggctagtt cgagatcgga gaccctatgg cactcctatg gatttcggcc
651 aagtattcaa catgtttgac aacgagccta gcactgcaac cgttaagaac
701 gatctacgag atcgttatca agttttgcac aggttttacg cgaaagtcac
751 tggtggtcag tatgctagca acgaacaagc cttggtgagg cgtttttgga
801 aggtcaacaa ttatgttgtc tacaatcacc aggaagcagc aaaatacgag
851 aatcatacgg agaacgcttt attattgtat atggcatgta ctcatgcatc
901 taaccctgtg tacgcgacat tgaaaattcg gatctatttt tatgattcga
951 taacaaatta ataaacgttg aattttatta tatgattctc gattacataa
1001 tttacatatg aacggtctgt cgcccatgat acagcacgta tgacgttatt
1051 gagaccgata acccctaatc tatctaaata caacataact aaatgtttaa
1101 atctatttaa ataagtcgtc ccagaagctc gaatcgattc cgtccagact
1151 tggaagttca ggtatgcttt gtgaagattt agcgctctcc gcaggttgtg
1201 gttgaatcgg atttgtatgt ggtatattct tgtgtgcgta tacagtggat
1251 cctccacttt gtatatcttg aaatagaggg gatttggaac ttcccagata
1301 aaaacggaat tctccgcctg atacacagtg atgtcttccc aagtgcgtaa
1351 atccattacc atttttttgg cagctaagat ggaggaatat ggaacagccg
1401 cagttcaggt cgatgcgtct acgacggata gctcttgttt tagcgatctt
1451 gtgttgtgct ttgatagagg gggcagtcga ggaagatgaa ttgggcattt
1501 tttagtgtcc actctcttag tgctgcattt tcagctttgt cgagaaactc
1551 tttatagctg gccccctctc cgggattgca aagcactatt gatgggattc
1601 cacctttaat ttgaaccggc tttccatatt tacagttgga ctgccagtcc
1651 ctttgggccc caatcaattc tttccagtgc tttagcttta aataatgcgg
1701 agcgacgtca tcaatgacgt tatacttgac gtcatttgag aaaaccctag
1751 aattgaaatc aaggtgtcca ctcaaatagt tatgtgggcc taaagaccga
1801 gcccacattg ttttgcccgt tcgagaatca ccctcaatta ttacactaat
1851 aggtctatta cacacgttat ttgattcttt tattaaaaat ggccgcgcag
1901 ctgaacattc attaaaataa tgatcagccc aatcttttaa ctcttctgga
1951 acatttgtaa acgaagaaag ttcatatggg ggaacccatg gcattggagg
2001 tttatgaaat aggcgatcga cgttagccgt tatgttatgg taactcacta
2051 taaacgtctt tggatcgcca gcttttataa tgtcgagagc ctctcccgca
2101 cttgctgcat tgacggcgtt gtgataaacg tcgtctttat tggactttga
2151 acccccagac accttatatt gcccgaattc acaataatca ccttctttgg
2201 tgatgtaatt cttgacggca ttggtgtctt tggcagcttg aatattaggg
2251 tgaaatcggg cagaccttct tgggtgagta atgtcgaaaa atccagcatc
2301 cttgatgttt gacttgcctg aaagttgaac gaggcagtgt aagtgcggga
2351 acccatctgc gtgttcctct cgtgcgacac ggatatatgt cggtttgacg
2401 actgaccagg atagaccttg cagtatttca agaacttcat ctttgggaac
2451 atcgcacttc ggatatgtta ggaaaatatt tctggcagat aagcggaacg
2501 atttagggtt ctgtggcata ttttgtaaat atgagccggg acaccaggag
2551 gagctctctc taaaacctat atttgtggtg tcctggtgtc ctatatatac
2601 tacaaggctt ctaggaggct tctaggacac caggggtaaa ttcggccatc
2651 cgcaataata tt