Sequence of DPV Sweet potato leaf curl Georgia virus

Sweet potato leaf curl Georgia virus-[16] DNA A, complete sequence.

ACC No: AF326775

Dated: 2008-02-23 | Length: 2773 | CRC: 1754106827

                
ID   AF326775; SV 1; circular; genomic DNA; STD; VRL; 2773 BP.
XX
AC   AF326775;
XX
DT   04-FEB-2002 (Rel. 70, Created)
DT   23-FEB-2008 (Rel. 94, Last updated, Version 6)
XX
DE   Sweet potato leaf curl Georgia virus-[16] DNA A, complete sequence.
XX
KW   .
XX
OS   Sweet potato leaf curl Georgia virus-[16]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2773
RA   Lotrakul P., Valverde R.A., Clark C.A., Fauquet C.M.;
RT   "Properties of a Begomovirus isolated from sweet potato [Ipomoea batatas
RT   (L.)Lam] infected with Sweet potato leaf curl virus";
RL   Rev. Mex. Fitopatol. 21:128-136(2003).
XX
RN   [2]
RP   1-2773
RA   Lotrakul P., Valverde R.A.;
RT   ;
RL   Submitted (06-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology and Crop Physiology, Louisiana State University, 302 Life
RL   Sciences Bldg., Baton Rouge, LA 70803, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2773
FT                   /organism="Sweet potato leaf curl Georgia virus-[16]"
FT                   /segment="DNA A"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:223330"
FT   gene            92. .436
FT                   /gene="AV2"
FT   CDS             92. .436
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:Q8V5Z8"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z8"
FT                   /protein_id="AAL69639.1"
FT                   /translation="MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELC
FT                   SELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGF
FT                   KRRPDEEKEG"
FT   gene            261. .1025
FT                   /gene="AV1"
FT   CDS             261. .1025
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8V5Z7"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z7"
FT                   /protein_id="AAL69640.1"
FT                   /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT                   PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK
FT                   RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNMDPLTFAQAFTMYDNEPTTA
FT                   KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE
FT                   NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT   gene            complement(1022. .1459)
FT                   /gene="AC3"
FT   CDS             complement(1022. .1459)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="AC3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z6"
FT                   /protein_id="AAL69641.1"
FT                   /translation="MDSRTGESLSHAQTTRAAEFFNNPMSVGQTAPFHLRLLYVHTNNI
FT                   NTKKVIKLQLQVNHRNRREIGFLKIFLQFRIVTTQLTGVIPSWTGILQRLKWHICNSLA
FT                   SLGFFSLINLVYVIRHLPESVRWIEEIDVIDCKDDIKILLY"
FT   gene            complement(1173. .1622)
FT                   /gene="AC2"
FT   CDS             complement(1173. .1622)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="AC2"
FT                   /db_xref="GOA:Q8V5Z5"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z5"
FT                   /protein_id="AAL69642.1"
FT                   /translation="MSTAPSGYKRKCPIQEPLHTAAKKAKRKAPEPRTRIVWKGCGCSA
FT                   FITNDCKYQHGFTHRGITKSCTDYESSRILQQPHVCGSDCSIPSTVVVCPYQQHKHKEG
FT                   HQVAASSQPQEQEGNWIPEDIPPIPNSDNPADWCYSQLDWYFATP"
FT   gene            complement(1531. .2625)
FT                   /gene="AC1"
FT   CDS             complement(1531. .2625)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="rep protein"
FT                   /note="replication association protein"
FT                   /db_xref="GOA:Q8V5Z4"
FT                   /db_xref="HSSP:P27260"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z4"
FT                   /protein_id="AAL69643.1"
FT                   /translation="MPRQPGFRVSAKNVFLTYPKCSLSKETALELLKAINCPSDKLFIR
FT                   VSQEEHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSNQFHPNFQGAKSSSDVKSYI
FT                   EKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQYH
FT                   NLRSNLDRIFSPPPSVYSSPFLSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGP
FT                   SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW
FT                   QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKNWAVKNAIFCDVDSPF
FT                   WIQEEVSHSGTSAHSGEESQEEGS"
FT   gene            complement(2211. .2468)
FT                   /gene="AC4"
FT   CDS             complement(2211. .2468)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V5Z3"
FT                   /protein_id="AAL69644.1"
FT                   /translation="MGLCTSMLSSSSRVKPNLKTPDISTCNTPTAPTNSIQISRELNHH
FT                   QMSSPTSRKTVITSTGVLFKSTEDLLEEVSRQLMMQQQRP"
XX
SQ   Sequence 2773 BP; 731 A; 573 C; 649 G; 820 T; 0 other;

af326775 Length: 2773  23-FEB-2008  Type: N  Check: 8441  ..

       1  accggtgccc gccgcgccct tttaaagtgg gccccacacg ctttgcttta
      51  attatttaaa ggcgtgcctg gtgtagactt ggtcgccaag tatggctgaa
     101  ttgtgggacc ctctgcaaaa cccactacca gatactttat acggtttccg
     151  ttgtatgctt tctgtaaaat acctgcaagg tattttgaag aaatacgagc
     201  caggaaccct agggttcgag ctctgttcgg agttaatccg tatattcagg
     251  gtcaggcagt atgacagggc gaattcccgt ttcgcggaga tttcatccct
     301  atggggggag accggtaaga cggaggctga acttcgagac agctatcgtg
     351  ccctacactg ggaatgctgt cccaattgct gcccgaagct atgtcccggt
     401  ttcaagaggc gtccggatga agagaaagag gggtgaccgc atcccgaagg
     451  gatgtgttgg tccctgtaag gtccaggact atgagttcaa gatggacgtt
     501  ccccacacgg gaacgtttgt ctgtgtctcg gattttacaa gggggactgg
     551  gcttacccat cgtttgggta agagggtgtg tattaagtcc atgggtattg
     601  atggtaaggt ttggatggat gacaacgtcg ccaaaagaga ccataccaat
     651  attattactt attggttggt ccgagatcgg aggcccaata tggatccatt
     701  aacatttgca caggctttta ctatgtatga caatgagccc actactgcta
     751  agatccgtat ggatctgaga gatagaatgc aggtcctgaa gaagttctct
     801  gttactgtat ctggtggccc ttataaccac aaggaacagg ctttagttag
     851  gaagtttttt aagggattgt ataatcatgt tacttataat cataaggagg
     901  aggccaagta tgagaatcat ttagagaatg cgttaatgtt gtattctgct
     951  agcagtcatg ctagcaatcc tgtgtatcag accctgcgtt gcagggctta
    1001  tttttatgat tcgcacaaca attaataaag aagtattttt atatcatctt
    1051  tacaatctat tacatcgatt tcttctatcc atctaactga ttcaggcaaa
    1101  tgcctgatta cataaactaa attgataaga gaaaaaaaac ctaaactagc
    1151  taagctatta catatatgcc atttaaggcg ttgcaaaata ccagtccaac
    1201  tgggaataac accagtcagc tgggttgtca ctattcggaa ttggaggaat
    1251  atcttcagga atccaatttc cctcctgttc ctgtggttga cttgaagctg
    1301  caacttgatg accttctttg tgtttatgtt gttggtatgg acatacaaca
    1351  accgtagatg gaatggagca gtctgaccca cagacatggg gttgttgaag
    1401  aattctgctg ctctcgtagt ctgtgcatga cttagtgatt cccctgtgcg
    1451  tgaatccatg ctgatattta cagtcgttgg tgatgaaggc tgagcaacca
    1501  cagcccttcc acactatcct agtcctcggc tcaggagcct tcctcttggc
    1551  tttcttcgcc gctgtgtgca gaggttcctg aatgggacac ttcctcttgt
    1601  atccagaagg ggctgtcgac atcacagaat attgcgttct taacagccca
    1651  gttcttaagc gcctcttgtt ctggcttgtc cagccagaat ttaaaagagg
    1701  aaccctctcc tggattgcag aggaagatag tgggaattcc acctttaatt
    1751  tgaactggct ttccgtattt acagttgctt tgccagtcct tctgggcccc
    1801  catgaattcc ttaaagtgct ttaggtattg gggattgacg tcatcaatga
    1851  cgttatacca agcactgttg ctgtacactt ttgggctcaa gtccaaatga
    1901  ccacacagat aattatgtgg acctaaagac cgtgcccaaa ctgttttacc
    1951  tatcctactt gggccttcta ttacaatact aatgggccta tctggccgcg
    2001  cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcaggt
    2051  acattattga aagaagaaga taaaaaagga gaagaatata cagaaggagg
    2101  aggagaaaaa attctatcta aattactacg taaattatga tattgaaaaa
    2151  taaaatctct agggagtttc tccctaatta tttgtaatgc tgcttcagca
    2201  gagcctgcgt ttaaggcctc tgctgctgca tcattagctg tctgctgacc
    2251  tcctctagca gatcttccgt cgacttgaaa agtaccccag tcgatgtaat
    2301  caccgtcttt ctcgatgtag gacttgacat ctgatgatga tttagctccc
    2351  tggaaatttg gatggaattg gttggagctg ttggggtgtt gcaggtcgaa
    2401  atgtctgggg tttttaaatt gggctttacc cttgaactgg atgagagcat
    2451  ggaggtgcaa agacccatct tggtgttctt cttgactaac tctgataaac
    2501  aatttatcag atgggcagtt tattgccttt aatagttcaa gagctgtttc
    2551  tttagagaga gaacatttgg gataagtaag aaagacattt ttggctgaga
    2601  ctctaaaacc tggttgacga ggcatattgg tgtccctcta aactccacgg
    2651  aattggtgtc tttggtgtcc catttatacc tgggacacca atggcatttt
    2701  ggtaaaaaaa aacctttaat ttgaattctg aaatcctatt ggtcctccgt
    2751  aaagcgggca ccgtattaat att