Sequence of DPV Sweet potato leaf curl Georgia virus
Sweet potato leaf curl Georgia virus-[16] DNA A, complete sequence.
ACC No: AF326775
Dated: 2008-02-23 | Length: 2773 | CRC: 1754106827
ID AF326775; SV 1; circular; genomic DNA; STD; VRL; 2773 BP. XX AC AF326775; XX DT 04-FEB-2002 (Rel. 70, Created) DT 23-FEB-2008 (Rel. 94, Last updated, Version 6) XX DE Sweet potato leaf curl Georgia virus-[16] DNA A, complete sequence. XX KW . XX OS Sweet potato leaf curl Georgia virus-[16] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2773 RA Lotrakul P., Valverde R.A., Clark C.A., Fauquet C.M.; RT "Properties of a Begomovirus isolated from sweet potato [Ipomoea batatas RT (L.)Lam] infected with Sweet potato leaf curl virus"; RL Rev. Mex. Fitopatol. 21:128-136(2003). XX RN [2] RP 1-2773 RA Lotrakul P., Valverde R.A.; RT ; RL Submitted (06-DEC-2000) to the EMBL/GenBank/DDBJ databases. RL Plant Pathology and Crop Physiology, Louisiana State University, 302 Life RL Sciences Bldg., Baton Rouge, LA 70803, USA XX FH Key Location/Qualifiers FH FT source 1. .2773 FT /organism="Sweet potato leaf curl Georgia virus-[16]" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /db_xref="taxon:223330" FT gene 92. .436 FT /gene="AV2" FT CDS 92. .436 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q8V5Z8" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z8" FT /protein_id="AAL69639.1" FT /translation="MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELC FT SELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGF FT KRRPDEEKEG" FT gene 261. .1025 FT /gene="AV1" FT CDS 261. .1025 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q8V5Z7" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z7" FT /protein_id="AAL69640.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNMDPLTFAQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1022. .1459) FT /gene="AC3" FT CDS complement(1022. .1459) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z6" FT /protein_id="AAL69641.1" FT /translation="MDSRTGESLSHAQTTRAAEFFNNPMSVGQTAPFHLRLLYVHTNNI FT NTKKVIKLQLQVNHRNRREIGFLKIFLQFRIVTTQLTGVIPSWTGILQRLKWHICNSLA FT SLGFFSLINLVYVIRHLPESVRWIEEIDVIDCKDDIKILLY" FT gene complement(1173. .1622) FT /gene="AC2" FT CDS complement(1173. .1622) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q8V5Z5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z5" FT /protein_id="AAL69642.1" FT /translation="MSTAPSGYKRKCPIQEPLHTAAKKAKRKAPEPRTRIVWKGCGCSA FT FITNDCKYQHGFTHRGITKSCTDYESSRILQQPHVCGSDCSIPSTVVVCPYQQHKHKEG FT HQVAASSQPQEQEGNWIPEDIPPIPNSDNPADWCYSQLDWYFATP" FT gene complement(1531. .2625) FT /gene="AC1" FT CDS complement(1531. .2625) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /note="replication association protein" FT /db_xref="GOA:Q8V5Z4" FT /db_xref="HSSP:P27260" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z4" FT /protein_id="AAL69643.1" FT /translation="MPRQPGFRVSAKNVFLTYPKCSLSKETALELLKAINCPSDKLFIR FT VSQEEHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSNQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQYH FT NLRSNLDRIFSPPPSVYSSPFLSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKNWAVKNAIFCDVDSPF FT WIQEEVSHSGTSAHSGEESQEEGS" FT gene complement(2211. .2468) FT /gene="AC4" FT CDS complement(2211. .2468) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V5Z3" FT /protein_id="AAL69644.1" FT /translation="MGLCTSMLSSSSRVKPNLKTPDISTCNTPTAPTNSIQISRELNHH FT QMSSPTSRKTVITSTGVLFKSTEDLLEEVSRQLMMQQQRP" XX SQ Sequence 2773 BP; 731 A; 573 C; 649 G; 820 T; 0 other; af326775 Length: 2773 23-FEB-2008 Type: N Check: 8441 .. 1 accggtgccc gccgcgccct tttaaagtgg gccccacacg ctttgcttta 51 attatttaaa ggcgtgcctg gtgtagactt ggtcgccaag tatggctgaa 101 ttgtgggacc ctctgcaaaa cccactacca gatactttat acggtttccg 151 ttgtatgctt tctgtaaaat acctgcaagg tattttgaag aaatacgagc 201 caggaaccct agggttcgag ctctgttcgg agttaatccg tatattcagg 251 gtcaggcagt atgacagggc gaattcccgt ttcgcggaga tttcatccct 301 atggggggag accggtaaga cggaggctga acttcgagac agctatcgtg 351 ccctacactg ggaatgctgt cccaattgct gcccgaagct atgtcccggt 401 ttcaagaggc gtccggatga agagaaagag gggtgaccgc atcccgaagg 451 gatgtgttgg tccctgtaag gtccaggact atgagttcaa gatggacgtt 501 ccccacacgg gaacgtttgt ctgtgtctcg gattttacaa gggggactgg 551 gcttacccat cgtttgggta agagggtgtg tattaagtcc atgggtattg 601 atggtaaggt ttggatggat gacaacgtcg ccaaaagaga ccataccaat 651 attattactt attggttggt ccgagatcgg aggcccaata tggatccatt 701 aacatttgca caggctttta ctatgtatga caatgagccc actactgcta 751 agatccgtat ggatctgaga gatagaatgc aggtcctgaa gaagttctct 801 gttactgtat ctggtggccc ttataaccac aaggaacagg ctttagttag 851 gaagtttttt aagggattgt ataatcatgt tacttataat cataaggagg 901 aggccaagta tgagaatcat ttagagaatg cgttaatgtt gtattctgct 951 agcagtcatg ctagcaatcc tgtgtatcag accctgcgtt gcagggctta 1001 tttttatgat tcgcacaaca attaataaag aagtattttt atatcatctt 1051 tacaatctat tacatcgatt tcttctatcc atctaactga ttcaggcaaa 1101 tgcctgatta cataaactaa attgataaga gaaaaaaaac ctaaactagc 1151 taagctatta catatatgcc atttaaggcg ttgcaaaata ccagtccaac 1201 tgggaataac accagtcagc tgggttgtca ctattcggaa ttggaggaat 1251 atcttcagga atccaatttc cctcctgttc ctgtggttga cttgaagctg 1301 caacttgatg accttctttg tgtttatgtt gttggtatgg acatacaaca 1351 accgtagatg gaatggagca gtctgaccca cagacatggg gttgttgaag 1401 aattctgctg ctctcgtagt ctgtgcatga cttagtgatt cccctgtgcg 1451 tgaatccatg ctgatattta cagtcgttgg tgatgaaggc tgagcaacca 1501 cagcccttcc acactatcct agtcctcggc tcaggagcct tcctcttggc 1551 tttcttcgcc gctgtgtgca gaggttcctg aatgggacac ttcctcttgt 1601 atccagaagg ggctgtcgac atcacagaat attgcgttct taacagccca 1651 gttcttaagc gcctcttgtt ctggcttgtc cagccagaat ttaaaagagg 1701 aaccctctcc tggattgcag aggaagatag tgggaattcc acctttaatt 1751 tgaactggct ttccgtattt acagttgctt tgccagtcct tctgggcccc 1801 catgaattcc ttaaagtgct ttaggtattg gggattgacg tcatcaatga 1851 cgttatacca agcactgttg ctgtacactt ttgggctcaa gtccaaatga 1901 ccacacagat aattatgtgg acctaaagac cgtgcccaaa ctgttttacc 1951 tatcctactt gggccttcta ttacaatact aatgggccta tctggccgcg 2001 cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcaggt 2051 acattattga aagaagaaga taaaaaagga gaagaatata cagaaggagg 2101 aggagaaaaa attctatcta aattactacg taaattatga tattgaaaaa 2151 taaaatctct agggagtttc tccctaatta tttgtaatgc tgcttcagca 2201 gagcctgcgt ttaaggcctc tgctgctgca tcattagctg tctgctgacc 2251 tcctctagca gatcttccgt cgacttgaaa agtaccccag tcgatgtaat 2301 caccgtcttt ctcgatgtag gacttgacat ctgatgatga tttagctccc 2351 tggaaatttg gatggaattg gttggagctg ttggggtgtt gcaggtcgaa 2401 atgtctgggg tttttaaatt gggctttacc cttgaactgg atgagagcat 2451 ggaggtgcaa agacccatct tggtgttctt cttgactaac tctgataaac 2501 aatttatcag atgggcagtt tattgccttt aatagttcaa gagctgtttc 2551 tttagagaga gaacatttgg gataagtaag aaagacattt ttggctgaga 2601 ctctaaaacc tggttgacga ggcatattgg tgtccctcta aactccacgg 2651 aattggtgtc tttggtgtcc catttatacc tgggacacca atggcatttt 2701 ggtaaaaaaa aacctttaat ttgaattctg aaatcctatt ggtcctccgt 2751 aaagcgggca ccgtattaat att