Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate NL8 coat protein gene, complete cds.
ACC No: AF342891
Dated: 2009-09-05 | Length: 672 | CRC: -1828353054
ID AF342891; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC AF342891; XX DT 30-MAR-2001 (Rel. 67, Created) DT 05-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Citrus tristeza virus isolate NL8 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RC Publication Status: Online-Only RP 1-672 RX PUBMED; 19642988. RA Herrera-Isidron L., Ochoa-Sanchez J.C., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT "Sequence diversity on four ORFs of citrus tristeza virus correlates with RT pathogenicity"; RL Virol. J. 6:116-116(2009). XX RN [2] RA Herrera-Isidron L., Villarreal-Garcia L.A., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT "Molecular Analysis of Citrus tristeza virus from Mexico"; RL Unpublished. XX RN [3] RP 1-672 RA Herrera-Isidron L., Villarreal-Garcia L.A., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT ; RL Submitted (26-JAN-2001) to the EMBL/GenBank/DDBJ databases. RL Departamento de Biotecnologia y Bioquimica, CINVESTAV Irapuato, km 9.6 lib. RL norte Carr. Irapuato-Leon, Irapuato, Guanajuato 36500, Mexico XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="NL8" FT /mol_type="genomic RNA" FT /country="Mexico:State of Nuevo Leon" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q9IFW4" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q9IFW4" FT /protein_id="AAK27477.1" FT /translation="MDDETKKLKNKNKETKEGDEVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 122 C; 170 G; 181 T; 0 other; af342891 Length: 672 05-SEP-2009 Type: N Check: 2796 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgaa gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgatt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg acgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga