Sequence of DPV Eimeria brunetti RNA virus 1
Eimeria brunetti RNA virus 1, complete genome.
ACC No: AF356189
Dated: 2001-03-29 | Length: 5358 | CRC: 747289175
!!NA_SEQUENCE 1.0
ID AF356189 standard; RNA; VRL; 5358 BP.
XX
AC AF356189;
XX
SV AF356189.1
XX
DT 29-MAR-2001 (Rel. 67, Created)
DT 29-MAR-2001 (Rel. 67, Last updated, Version 1)
XX
DE Eimeria brunetti RNA virus 1, complete genome.
XX
KW .
XX
OS Eimeria brunetti RNA virus 1
OC Viruses; dsRNA viruses; Totiviridae.
XX
RN [1]
RP 1-5358
RA Fraga J.S., Katsuyama A.M., Fernandez S., Madeira A.M.B.N., Briones M.R.S.,
RA Gruber A.;
RT "The genome of the Eimeria brunetti RNA virus 1 is more closely related to
RT fungal than to protozoan viruses";
RL Unpublished.
XX
RN [2]
RP 1-5358
RA Gruber A., Fraga J.S., Katsuyama A.M., Fernandez S., Madeira A.M.B.N.;
RT ;
RL Submitted (05-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL Pathology, Faculty of Veterinary Medicine and Zootechny - University of Sao
RL Paulo, Av. Prof. Orlando Marques de Paiva 87, Sao Paulo, SP 05508-000,
RL Brazil
XX
DR SPTREMBL; Q98XW8; Q98XW8.
DR SPTREMBL; Q98XW9; Q98XW9.
XX
FH Key Location/Qualifiers
FH
FT source 1. .5358
FT /db_xref="taxon:155414"
FT /note="Eb-RV1"
FT /virion
FT /organism="Eimeria brunetti RNA virus 1"
FT 5'UTR 1. .357
FT CDS 358. .2670
FT /codon_start=1
FT /db_xref="SPTREMBL:Q98XW9"
FT /evidence=NOT_EXPERIMENTAL
FT /note="capsid protein; ORF1"
FT /product="coat protein"
FT /protein_id="AAK26437.1"
FT /translation="MSIGTSNALRTRTNCGRKMDSGYKISCLLGEVVPGGARVEVPTFG
FT NYRKYMSRLEMRACTRGLPQSTYCPIQFEVGAAFNLGTCAKNFKRETWLQHVMREGPML
FT GCSYATPVEVRKVLKEERFRQVGQAEWLTFNFDAIVCVLGAVAATLTLVPDLSTADWRN
FT TSPSVRGLVSVEDLHAANSGGVVYYDPCALGIHAECAKWLMIYAANVCGATVVVPHLTL
FT DVNNRPICKDYDGAELRRGLSVLLNILGTYYSMANAGDMYALALMTGVHRVLTVVGHSD
FT EGGWLRDVLRQGWWQQPHGGVPRSLPFSSGISVDDGRTLGTFVALVDSIALGTAAAVAH
FT CDPLVPVGDNVFPTVFTVDLPEDGELANGVMQRLMARTIADGCAKFSELYATALAKLFR
FT LHVNVTELHAAGVLQQMASYFAESGSRHTDMAVCHPFFWIEPTTVLPAGEFGFPAEIYG
FT YASLCHATQRRTMPFFEAIEEEGLSDTVVSHWRVRIRSPRTCGYVLYTTNHPKNGLANL
FT LLRGFNSSALVLGTKSPEEIRCKKAAKGFVTFADLMWKRGQAKLPHPAEVLNVDGTFTV
FT SILHAAITTRHYQKPIEHIPPPEDLSRMYLTLHATRLAYYKAGPANVEPGGVRRLRNMG
FT VDAINDMNGVVQNTMLRMSSFPPPSETAPVLNKPGRAFGGAAAAVSERCVEPVRGDAAE
FT ESPPRVAQGQAVEATMVHASAPAPQPHRGPGPSDGGGGLGGHRDLVAGVGDATAVAAGA
FT VTVPESGSRQTASATQQ"
FT CDS 2667. .5321
FT /codon_start=1
FT /db_xref="SPTREMBL:Q98XW8"
FT /evidence=NOT_EXPERIMENTAL
FT /note="ORF2"
FT /function="involved in dsRNA replication"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="AAK26438.1"
FT /translation="MMTELLPRLTPVVAADEMGELYLRTTFPRPPLAGTFNDTGLFPVM
FT YAETASLQHAVRRILRHGPLSLTQSECLARSTFTAVGDEAVLCRRAEEAFWDLLLASEW
FT PMHVAPVPWLLKHVVTLIARGLKQSLLEHRIPGGWIKHIRNGRSPSKEWLLGYWPRKSH
FT PLAGKKANLFLDCVIADFLQNYKCLGPVLEGWMKRTHLLGIYEDQACNIIVYAQAVMLE
FT FGFEESLYLATWAVLRAKQAKALSDVLKAMGQNMCAVGRHLCELAVLQGRGVNRLDLLE
FT DAERRVSATFNCPIVHVPADALRQCVRDVLRRELRTRVVLPPSDDFFRRRYAWCVGGAH
FT NLNGNDHWLPRSLLPQFPAALLWNRRAALNCVERNPLKRWSGHVRVSVAEKVEQGKGRA
FT IYSCDTLSYTAFSWLLEAVEKEWASRSVILNPGKGGTLGMMNRIRGAATGGRRQCYLML
FT DYSDFNSQHSNEAMRIVIEETLACCDHNEPELAAKLLKSIDDMHIYLRGVHIGRVAGSL
FT MSGHRATTYWNSVLNAAYVRYAIGRVAYDTYKPFHVGDDVLILLDSPADAWNVVKKLEH
FT IGCTLQRSKQSVGIGGYEFLRVAGSPFTGVGGYVARSVAGLVSGSWVSSVKMAPREALQ
FT SLIQQARSIMNRSGNPAAYKLLISSARRTIGIDQQYLEEFLSGNVALAPGPCYRSDRRY
FT VARHVEWESSADDPYGGGRLLIGGIEIEKLPNHAARDYVNWAASEVERVGLAMVGRVPW
FT RAMALTAYAAMEPSLYGNPSGGVRAAYISPRTVRLIDHYIDAADITTTDSQHGILAQYP
FT LLSLLRNYFSMEDLTYLLNFVGRDAGIDARVTAWGGTNEGICVCGLLPYADAAGAASRV
FT LGNAIHVSVPVAV"
FT misc_feature 2667. .2670
FT /note="overlap between ORF1 and ORF2"
FT 3'UTR 5322. .5358
XX
SQ Sequence 5358 BP; 1132 A; 1316 C; 1690 G; 1220 T; 0 other;
AF356189 Length: 5358 December 21, 2001 15:32 Type: N Check: 8028 ..
1 tgaatgaaaa gcgcgagcgc ggcgtcgtgt cgaccgcttt tctgatcctg
51 ctggttgctg gaccaatacc catcagtagc aggcaggggg agtgcctcga
101 gtcacagtta acgtcggctg tgtcacgacg gtcagctcct agtaaattgc
151 ataggagttc accctgtgta ttcgccctgc ggggtggtac actggaacca
201 cggtccctta gcccagggat agcgccgtgg ggggatcgca tgagggcgta
251 gttagggttc tgctattcag acgtacgcac attaagtgta gtaggccgtc
301 atgtggtggt aagcctaccg ctggtaccgg ggtacagcgc ctacgaccta
351 caagctcatg tcgataggaa cttccaatgc cttgcgcacg agaacgaatt
401 gcggacggaa gatggattcg ggttataaga tctcgtgttt attgggagag
451 gtcgttcccg gtggcgcccg ggtggaggtt ccgacttttg gcaattatcg
501 taaatacatg tcgcgtcttg agatgcgagc ctgcacgcgt ggtctacctc
551 aatcgacgta ctgtcctata cagtttgagg ttggagcagc gtttaatctc
601 ggcacatgtg ccaagaactt taagcgagag acttggcttc agcatgtcat
651 gcgtgagggg cctatgttgg gctgctcgta tgctacaccg gttgaggtca
701 ggaaggtact caaggaggag aggttcaggc aggttggcca ggcagaatgg
751 ctgactttta acttcgacgc cattgtgtgt gtgctgggcg cagtggctgc
801 tacgttgacg ttggtgcctg acctctcaac tgcggattgg cgaaatacga
851 gcccttcagt acggggtctt gtgtcggtgg aagacctcca tgctgccaat
901 tcggggggcg ttgtgtatta tgatccgtgc gctttgggca tccacgcgga
951 gtgcgcaaaa tggctaatga tctacgcggc caacgtgtgc ggagcgaccg
1001 ttgtggtgcc gcacttgaca ctggacgtaa acaatcgccc gatatgcaaa
1051 gattatgatg gagcggaact gcgtcggggg ctttcggtcc tgctcaacat
1101 attgggcacg tactactcta tggcaaatgc gggtgatatg tatgcgttgg
1151 ccctgatgac aggggtgcac agagttctga ccgtcgtcgg gcacagtgac
1201 gagggaggtt ggctgcgcga tgtgctgcgt cagggttggt ggcagcaacc
1251 acatgggggc gtgccacgat ctttgccttt cagttcgggc atatctgtgg
1301 atgatggccg cactttggga acattcgttg ctttggtgga cagtatcgct
1351 ttaggtacgg cggctgcagt cgcccattgc gacccgctcg tacctgtggg
1401 agacaacgtt tttcctactg tgtttactgt cgacttgcct gaagacggtg
1451 agctggctaa cggtgtcatg cagagattga tggcccgcac gattgctgat
1501 gggtgtgcca agttcagcga actatacgct actgcgctag ctaagctttt
1551 tcggctacac gtcaatgtga ctgagttgca cgctgctggc gtattacagc
1601 agatggcaag ttactttgcg gaaagtggct ccagacacac ggacatggca
1651 gtgtgtcacc ccttcttttg gatagagccc acgacggtgt tgcctgctgg
1701 tgagttcggt ttccccgcgg agatctacgg gtatgcaagc ttgtgtcacg
1751 ccacccagcg gcgaaccatg ccgtttttcg aggcgataga agaggagggc
1801 ctcagtgata cagtggtgag tcactggcgc gtacggatac gcagtccgcg
1851 cacctgtggg tacgtacttt acaccacaaa ccatccgaag aacggactgg
1901 ccaacttgct gctccgaggt ttcaacagca gtgcgttggt gctgggtact
1951 aaatctcctg aagagatcag atgtaagaag gcggcaaaag gctttgttac
2001 ctttgctgac ttgatgtgga agcgcggaca ggccaaacta ccgcatccag
2051 cagaagttct taatgttgat ggaacgttta ctgtgagtat cttacatgct
2101 gcaataacta cacgccacta ccagaaaccg attgaacaca tacccccacc
2151 agaagattta agtaggatgt atctaacatt acacgctacc agactggctt
2201 actataaggc tgggcctgcg aacgtagagc ccgggggtgt gcgtcggttg
2251 cgtaacatgg gtgttgacgc gatcaacgat atgaacggtg tggtgcagaa
2301 cacgatgctg cggatgtcga gttttccccc gccgagtgag acggcgcccg
2351 tgctgaacaa gccaggccgg gcctttggcg gggctgctgc ggccgttagt
2401 gagcggtgtg ttgagccagt gcgcggcgac gcagctgagg agtcgccacc
2451 gcgtgtggcg caaggccaag ccgtagaggc caccatggtt cacgcgagcg
2501 caccggcacc gcagccacac cggggaccgg gtcccagtga cggtggcgga
2551 ggtctcgggg gacaccggga cctagtcgcg ggagtgggtg atgctacagc
2601 cgttgcggcg ggggcggtaa cggtacctga gagcggtagc cggcaaactg
2651 cctccgccac acagcaatga tgactgagct gctgccacga ctgacccccg
2701 tcgtggcggc tgacgagatg ggggaactct atttaaggac aacctttccg
2751 cggcctccat tggctgggac ctttaacgac acagggttat tcccagtcat
2801 gtacgcggag acagcgagtc tgcaacacgc ggtccgtcgc atcttacgac
2851 acgggccgct gtctttgact cagagcgaat gcctcgcccg ctcaacattc
2901 accgcagtcg gggatgaggc cgtgttgtgt aggcgcgcgg aggaggcgtt
2951 ttgggactta ctgttagcca gcgagtggcc aatgcatgtg gcaccggtgc
3001 catggctgct gaagcatgtt gtgactttga ttgctagggg cctaaaacag
3051 tccttgttgg aacatagaat tccaggcggc tggattaagc atatcagaaa
3101 tggacggtct ccaagcaagg agtggctgct gggctactgg ccacgcaagt
3151 cacaccccct ggccggcaag aaagcgaact tatttttgga ctgtgtgatc
3201 gctgacttcc tacagaacta caagtgcctg ggccctgttt tggagggttg
3251 gatgaaacgc actcacttgt tgggtatata tgaagatcag gcgtgcaaca
3301 tcattgttta tgcgcaggcc gttatgctcg aatttggctt cgaggagagc
3351 ttgtatctag ccacatgggc agtattgagg gccaagcaag ctaaagcgtt
3401 gtctgatgtt ctgaaggcaa tgggccagaa catgtgtgcc gttgggcgcc
3451 acttatgcga actcgcggtg ttgcagggac gcggcgtcaa caggctggac
3501 ttgcttgagg acgctgagcg ccgggtcagt gcgacattca actgtcccat
3551 agtgcacgtc ccagcggacg cgttgagaca gtgcgttcgt gacgtcctca
3601 ggagagagct gagaacgcgt gtggtgctgc cgcccagcga cgatttcttc
3651 cgtcgtcgct acgcctggtg tgtgggtggc gcacacaatc ttaatggcaa
3701 cgatcactgg ttgccgcgct cgctgctgcc ccagttcccg gctgcgttgc
3751 tgtggaaccg cagagctgct ctcaactgcg tcgaacgtaa cccgctcaag
3801 aggtggtcgg ggcacgtgcg ggtgtcggtt gccgagaaag ttgaacaagg
3851 gaagggtcgt gccatttact cgtgtgacac gctaagctat acggcgttta
3901 gttggttgct agaggctgtg gaaaaagaat gggcatcacg ctctgtgata
3951 ctgaaccccg gcaagggtgg caccttaggg atgatgaaca ggatcagagg
4001 cgctgcgacc gggggcagac gtcaatgcta cttgatgctg gattactctg
4051 actttaactc ccaacactcg aatgaggcta tgcggattgt gatagaggag
4101 acgttggcct gctgcgacca caacgagcct gagcttgcgg ccaaattgtt
4151 gaagtcgatc gatgacatgc acatctactt gcgaggcgtc catattggca
4201 gagttgccgg ctcactaatg agtggacacc gtgccactac ctactggaat
4251 agcgtcctca atgctgcata cgtgcgttac gctatcggac gagtggcgta
4301 cgacacatac aaaccgttcc acgtaggtga cgacgtgcta attctgctgg
4351 atagccctgc agacgcgtgg aatgtagtga agaagctgga gcacattggc
4401 tgcactctac aacgctcgaa gcagtctgtg ggcataggtg gctacgagtt
4451 cctgcgtgtc gctggctcgc cattcactgg tgtgggcggt tacgtggcga
4501 ggtcggtggc aggcctggta agtggtagtt gggtgtcaag cgtcaagatg
4551 gcacctcgtg aagcactcca atcactgata caacaggcgc ggagcataat
4601 gaatcgcagt ggtaaccctg ccgcctacaa gctgctcatc agcagtgcca
4651 ggcgcacgat cgggattgac cagcaatatt tggaggaatt cttgtcgggt
4701 aacgtagcct tggcgcctgg accgtgttac cgcagtgatc ggcgatacgt
4751 ggcacgtcat gtcgaatggg agagttcggc tgatgacccg tacggtgggg
4801 ggagattgtt gatcggcggt attgaaattg agaagcttcc aaaccatgct
4851 gcgagagact acgtgaactg ggcggcgagc gaggtcgaac gtgtcgggct
4901 agccatggtc gggcgtgtgc cctggagagc gatggcgttg actgcttatg
4951 cggctatgga accgtcgctg tatgggaacc cgtctggcgg tgtgcgtgct
5001 gcgtacatat cacctcgtac cgtgcggtta atcgatcatt atattgacgc
5051 agcggatata acaacaacgg attcacaaca cggtatacta gcacagtacc
5101 ccctgctatc tttattgcga aactatttca gcatggagga cctgacctac
5151 ctgcttaatt tcgtcggaag agatgccggg atagatgcgc gagtgacggc
5201 gtggggaggt actaacgagg gtatttgtgt ctgtggtcta ctaccttatg
5251 cagatgctgc aggtgcggcg tcacgtgtac tgggcaacgc gatacacgtg
5301 tctgtgccgg tagcggtgtg aaacgaccgt gaggtcgggg accttcacac
5351 cgataggc