Sequence of DPV Eimeria brunetti RNA virus 1
Eimeria brunetti RNA virus 1, complete genome.
ACC No: AF356189
Dated: 2001-03-29 | Length: 5358 | CRC: 747289175
!!NA_SEQUENCE 1.0 ID AF356189 standard; RNA; VRL; 5358 BP. XX AC AF356189; XX SV AF356189.1 XX DT 29-MAR-2001 (Rel. 67, Created) DT 29-MAR-2001 (Rel. 67, Last updated, Version 1) XX DE Eimeria brunetti RNA virus 1, complete genome. XX KW . XX OS Eimeria brunetti RNA virus 1 OC Viruses; dsRNA viruses; Totiviridae. XX RN [1] RP 1-5358 RA Fraga J.S., Katsuyama A.M., Fernandez S., Madeira A.M.B.N., Briones M.R.S., RA Gruber A.; RT "The genome of the Eimeria brunetti RNA virus 1 is more closely related to RT fungal than to protozoan viruses"; RL Unpublished. XX RN [2] RP 1-5358 RA Gruber A., Fraga J.S., Katsuyama A.M., Fernandez S., Madeira A.M.B.N.; RT ; RL Submitted (05-MAR-2001) to the EMBL/GenBank/DDBJ databases. RL Pathology, Faculty of Veterinary Medicine and Zootechny - University of Sao RL Paulo, Av. Prof. Orlando Marques de Paiva 87, Sao Paulo, SP 05508-000, RL Brazil XX DR SPTREMBL; Q98XW8; Q98XW8. DR SPTREMBL; Q98XW9; Q98XW9. XX FH Key Location/Qualifiers FH FT source 1. .5358 FT /db_xref="taxon:155414" FT /note="Eb-RV1" FT /virion FT /organism="Eimeria brunetti RNA virus 1" FT 5'UTR 1. .357 FT CDS 358. .2670 FT /codon_start=1 FT /db_xref="SPTREMBL:Q98XW9" FT /evidence=NOT_EXPERIMENTAL FT /note="capsid protein; ORF1" FT /product="coat protein" FT /protein_id="AAK26437.1" FT /translation="MSIGTSNALRTRTNCGRKMDSGYKISCLLGEVVPGGARVEVPTFG FT NYRKYMSRLEMRACTRGLPQSTYCPIQFEVGAAFNLGTCAKNFKRETWLQHVMREGPML FT GCSYATPVEVRKVLKEERFRQVGQAEWLTFNFDAIVCVLGAVAATLTLVPDLSTADWRN FT TSPSVRGLVSVEDLHAANSGGVVYYDPCALGIHAECAKWLMIYAANVCGATVVVPHLTL FT DVNNRPICKDYDGAELRRGLSVLLNILGTYYSMANAGDMYALALMTGVHRVLTVVGHSD FT EGGWLRDVLRQGWWQQPHGGVPRSLPFSSGISVDDGRTLGTFVALVDSIALGTAAAVAH FT CDPLVPVGDNVFPTVFTVDLPEDGELANGVMQRLMARTIADGCAKFSELYATALAKLFR FT LHVNVTELHAAGVLQQMASYFAESGSRHTDMAVCHPFFWIEPTTVLPAGEFGFPAEIYG FT YASLCHATQRRTMPFFEAIEEEGLSDTVVSHWRVRIRSPRTCGYVLYTTNHPKNGLANL FT LLRGFNSSALVLGTKSPEEIRCKKAAKGFVTFADLMWKRGQAKLPHPAEVLNVDGTFTV FT SILHAAITTRHYQKPIEHIPPPEDLSRMYLTLHATRLAYYKAGPANVEPGGVRRLRNMG FT VDAINDMNGVVQNTMLRMSSFPPPSETAPVLNKPGRAFGGAAAAVSERCVEPVRGDAAE FT ESPPRVAQGQAVEATMVHASAPAPQPHRGPGPSDGGGGLGGHRDLVAGVGDATAVAAGA FT VTVPESGSRQTASATQQ" FT CDS 2667. .5321 FT /codon_start=1 FT /db_xref="SPTREMBL:Q98XW8" FT /evidence=NOT_EXPERIMENTAL FT /note="ORF2" FT /function="involved in dsRNA replication" FT /product="RNA-dependent RNA polymerase" FT /protein_id="AAK26438.1" FT /translation="MMTELLPRLTPVVAADEMGELYLRTTFPRPPLAGTFNDTGLFPVM FT YAETASLQHAVRRILRHGPLSLTQSECLARSTFTAVGDEAVLCRRAEEAFWDLLLASEW FT PMHVAPVPWLLKHVVTLIARGLKQSLLEHRIPGGWIKHIRNGRSPSKEWLLGYWPRKSH FT PLAGKKANLFLDCVIADFLQNYKCLGPVLEGWMKRTHLLGIYEDQACNIIVYAQAVMLE FT FGFEESLYLATWAVLRAKQAKALSDVLKAMGQNMCAVGRHLCELAVLQGRGVNRLDLLE FT DAERRVSATFNCPIVHVPADALRQCVRDVLRRELRTRVVLPPSDDFFRRRYAWCVGGAH FT NLNGNDHWLPRSLLPQFPAALLWNRRAALNCVERNPLKRWSGHVRVSVAEKVEQGKGRA FT IYSCDTLSYTAFSWLLEAVEKEWASRSVILNPGKGGTLGMMNRIRGAATGGRRQCYLML FT DYSDFNSQHSNEAMRIVIEETLACCDHNEPELAAKLLKSIDDMHIYLRGVHIGRVAGSL FT MSGHRATTYWNSVLNAAYVRYAIGRVAYDTYKPFHVGDDVLILLDSPADAWNVVKKLEH FT IGCTLQRSKQSVGIGGYEFLRVAGSPFTGVGGYVARSVAGLVSGSWVSSVKMAPREALQ FT SLIQQARSIMNRSGNPAAYKLLISSARRTIGIDQQYLEEFLSGNVALAPGPCYRSDRRY FT VARHVEWESSADDPYGGGRLLIGGIEIEKLPNHAARDYVNWAASEVERVGLAMVGRVPW FT RAMALTAYAAMEPSLYGNPSGGVRAAYISPRTVRLIDHYIDAADITTTDSQHGILAQYP FT LLSLLRNYFSMEDLTYLLNFVGRDAGIDARVTAWGGTNEGICVCGLLPYADAAGAASRV FT LGNAIHVSVPVAV" FT misc_feature 2667. .2670 FT /note="overlap between ORF1 and ORF2" FT 3'UTR 5322. .5358 XX SQ Sequence 5358 BP; 1132 A; 1316 C; 1690 G; 1220 T; 0 other; AF356189 Length: 5358 December 21, 2001 15:32 Type: N Check: 8028 .. 1 tgaatgaaaa gcgcgagcgc ggcgtcgtgt cgaccgcttt tctgatcctg 51 ctggttgctg gaccaatacc catcagtagc aggcaggggg agtgcctcga 101 gtcacagtta acgtcggctg tgtcacgacg gtcagctcct agtaaattgc 151 ataggagttc accctgtgta ttcgccctgc ggggtggtac actggaacca 201 cggtccctta gcccagggat agcgccgtgg ggggatcgca tgagggcgta 251 gttagggttc tgctattcag acgtacgcac attaagtgta gtaggccgtc 301 atgtggtggt aagcctaccg ctggtaccgg ggtacagcgc ctacgaccta 351 caagctcatg tcgataggaa cttccaatgc cttgcgcacg agaacgaatt 401 gcggacggaa gatggattcg ggttataaga tctcgtgttt attgggagag 451 gtcgttcccg gtggcgcccg ggtggaggtt ccgacttttg gcaattatcg 501 taaatacatg tcgcgtcttg agatgcgagc ctgcacgcgt ggtctacctc 551 aatcgacgta ctgtcctata cagtttgagg ttggagcagc gtttaatctc 601 ggcacatgtg ccaagaactt taagcgagag acttggcttc agcatgtcat 651 gcgtgagggg cctatgttgg gctgctcgta tgctacaccg gttgaggtca 701 ggaaggtact caaggaggag aggttcaggc aggttggcca ggcagaatgg 751 ctgactttta acttcgacgc cattgtgtgt gtgctgggcg cagtggctgc 801 tacgttgacg ttggtgcctg acctctcaac tgcggattgg cgaaatacga 851 gcccttcagt acggggtctt gtgtcggtgg aagacctcca tgctgccaat 901 tcggggggcg ttgtgtatta tgatccgtgc gctttgggca tccacgcgga 951 gtgcgcaaaa tggctaatga tctacgcggc caacgtgtgc ggagcgaccg 1001 ttgtggtgcc gcacttgaca ctggacgtaa acaatcgccc gatatgcaaa 1051 gattatgatg gagcggaact gcgtcggggg ctttcggtcc tgctcaacat 1101 attgggcacg tactactcta tggcaaatgc gggtgatatg tatgcgttgg 1151 ccctgatgac aggggtgcac agagttctga ccgtcgtcgg gcacagtgac 1201 gagggaggtt ggctgcgcga tgtgctgcgt cagggttggt ggcagcaacc 1251 acatgggggc gtgccacgat ctttgccttt cagttcgggc atatctgtgg 1301 atgatggccg cactttggga acattcgttg ctttggtgga cagtatcgct 1351 ttaggtacgg cggctgcagt cgcccattgc gacccgctcg tacctgtggg 1401 agacaacgtt tttcctactg tgtttactgt cgacttgcct gaagacggtg 1451 agctggctaa cggtgtcatg cagagattga tggcccgcac gattgctgat 1501 gggtgtgcca agttcagcga actatacgct actgcgctag ctaagctttt 1551 tcggctacac gtcaatgtga ctgagttgca cgctgctggc gtattacagc 1601 agatggcaag ttactttgcg gaaagtggct ccagacacac ggacatggca 1651 gtgtgtcacc ccttcttttg gatagagccc acgacggtgt tgcctgctgg 1701 tgagttcggt ttccccgcgg agatctacgg gtatgcaagc ttgtgtcacg 1751 ccacccagcg gcgaaccatg ccgtttttcg aggcgataga agaggagggc 1801 ctcagtgata cagtggtgag tcactggcgc gtacggatac gcagtccgcg 1851 cacctgtggg tacgtacttt acaccacaaa ccatccgaag aacggactgg 1901 ccaacttgct gctccgaggt ttcaacagca gtgcgttggt gctgggtact 1951 aaatctcctg aagagatcag atgtaagaag gcggcaaaag gctttgttac 2001 ctttgctgac ttgatgtgga agcgcggaca ggccaaacta ccgcatccag 2051 cagaagttct taatgttgat ggaacgttta ctgtgagtat cttacatgct 2101 gcaataacta cacgccacta ccagaaaccg attgaacaca tacccccacc 2151 agaagattta agtaggatgt atctaacatt acacgctacc agactggctt 2201 actataaggc tgggcctgcg aacgtagagc ccgggggtgt gcgtcggttg 2251 cgtaacatgg gtgttgacgc gatcaacgat atgaacggtg tggtgcagaa 2301 cacgatgctg cggatgtcga gttttccccc gccgagtgag acggcgcccg 2351 tgctgaacaa gccaggccgg gcctttggcg gggctgctgc ggccgttagt 2401 gagcggtgtg ttgagccagt gcgcggcgac gcagctgagg agtcgccacc 2451 gcgtgtggcg caaggccaag ccgtagaggc caccatggtt cacgcgagcg 2501 caccggcacc gcagccacac cggggaccgg gtcccagtga cggtggcgga 2551 ggtctcgggg gacaccggga cctagtcgcg ggagtgggtg atgctacagc 2601 cgttgcggcg ggggcggtaa cggtacctga gagcggtagc cggcaaactg 2651 cctccgccac acagcaatga tgactgagct gctgccacga ctgacccccg 2701 tcgtggcggc tgacgagatg ggggaactct atttaaggac aacctttccg 2751 cggcctccat tggctgggac ctttaacgac acagggttat tcccagtcat 2801 gtacgcggag acagcgagtc tgcaacacgc ggtccgtcgc atcttacgac 2851 acgggccgct gtctttgact cagagcgaat gcctcgcccg ctcaacattc 2901 accgcagtcg gggatgaggc cgtgttgtgt aggcgcgcgg aggaggcgtt 2951 ttgggactta ctgttagcca gcgagtggcc aatgcatgtg gcaccggtgc 3001 catggctgct gaagcatgtt gtgactttga ttgctagggg cctaaaacag 3051 tccttgttgg aacatagaat tccaggcggc tggattaagc atatcagaaa 3101 tggacggtct ccaagcaagg agtggctgct gggctactgg ccacgcaagt 3151 cacaccccct ggccggcaag aaagcgaact tatttttgga ctgtgtgatc 3201 gctgacttcc tacagaacta caagtgcctg ggccctgttt tggagggttg 3251 gatgaaacgc actcacttgt tgggtatata tgaagatcag gcgtgcaaca 3301 tcattgttta tgcgcaggcc gttatgctcg aatttggctt cgaggagagc 3351 ttgtatctag ccacatgggc agtattgagg gccaagcaag ctaaagcgtt 3401 gtctgatgtt ctgaaggcaa tgggccagaa catgtgtgcc gttgggcgcc 3451 acttatgcga actcgcggtg ttgcagggac gcggcgtcaa caggctggac 3501 ttgcttgagg acgctgagcg ccgggtcagt gcgacattca actgtcccat 3551 agtgcacgtc ccagcggacg cgttgagaca gtgcgttcgt gacgtcctca 3601 ggagagagct gagaacgcgt gtggtgctgc cgcccagcga cgatttcttc 3651 cgtcgtcgct acgcctggtg tgtgggtggc gcacacaatc ttaatggcaa 3701 cgatcactgg ttgccgcgct cgctgctgcc ccagttcccg gctgcgttgc 3751 tgtggaaccg cagagctgct ctcaactgcg tcgaacgtaa cccgctcaag 3801 aggtggtcgg ggcacgtgcg ggtgtcggtt gccgagaaag ttgaacaagg 3851 gaagggtcgt gccatttact cgtgtgacac gctaagctat acggcgttta 3901 gttggttgct agaggctgtg gaaaaagaat gggcatcacg ctctgtgata 3951 ctgaaccccg gcaagggtgg caccttaggg atgatgaaca ggatcagagg 4001 cgctgcgacc gggggcagac gtcaatgcta cttgatgctg gattactctg 4051 actttaactc ccaacactcg aatgaggcta tgcggattgt gatagaggag 4101 acgttggcct gctgcgacca caacgagcct gagcttgcgg ccaaattgtt 4151 gaagtcgatc gatgacatgc acatctactt gcgaggcgtc catattggca 4201 gagttgccgg ctcactaatg agtggacacc gtgccactac ctactggaat 4251 agcgtcctca atgctgcata cgtgcgttac gctatcggac gagtggcgta 4301 cgacacatac aaaccgttcc acgtaggtga cgacgtgcta attctgctgg 4351 atagccctgc agacgcgtgg aatgtagtga agaagctgga gcacattggc 4401 tgcactctac aacgctcgaa gcagtctgtg ggcataggtg gctacgagtt 4451 cctgcgtgtc gctggctcgc cattcactgg tgtgggcggt tacgtggcga 4501 ggtcggtggc aggcctggta agtggtagtt gggtgtcaag cgtcaagatg 4551 gcacctcgtg aagcactcca atcactgata caacaggcgc ggagcataat 4601 gaatcgcagt ggtaaccctg ccgcctacaa gctgctcatc agcagtgcca 4651 ggcgcacgat cgggattgac cagcaatatt tggaggaatt cttgtcgggt 4701 aacgtagcct tggcgcctgg accgtgttac cgcagtgatc ggcgatacgt 4751 ggcacgtcat gtcgaatggg agagttcggc tgatgacccg tacggtgggg 4801 ggagattgtt gatcggcggt attgaaattg agaagcttcc aaaccatgct 4851 gcgagagact acgtgaactg ggcggcgagc gaggtcgaac gtgtcgggct 4901 agccatggtc gggcgtgtgc cctggagagc gatggcgttg actgcttatg 4951 cggctatgga accgtcgctg tatgggaacc cgtctggcgg tgtgcgtgct 5001 gcgtacatat cacctcgtac cgtgcggtta atcgatcatt atattgacgc 5051 agcggatata acaacaacgg attcacaaca cggtatacta gcacagtacc 5101 ccctgctatc tttattgcga aactatttca gcatggagga cctgacctac 5151 ctgcttaatt tcgtcggaag agatgccggg atagatgcgc gagtgacggc 5201 gtggggaggt actaacgagg gtatttgtgt ctgtggtcta ctaccttatg 5251 cagatgctgc aggtgcggcg tcacgtgtac tgggcaacgc gatacacgtg 5301 tctgtgccgg tagcggtgtg aaacgaccgt gaggtcgggg accttcacac 5351 cgataggc