Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus from Aranda Noorah Alsagoff coat protein mRNA, complete cds.

ACC No: AF405722

Dated: 2005-04-15 | Length: 672 | CRC: 68743131

                !!NA_SEQUENCE 1.0
ID   AF405722   standard; mRNA; VRL; 672 BP.
XX
AC   AF405722;
XX
SV   AF405722.1
XX
DT   31-DEC-2004 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus from Aranda Noorah Alsagoff coat protein mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   "Variability in the coat protein gene of Cymbidium mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   ;
RL   Submitted (06-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, National University of Singapore, Block S2, 14 Science
RL   Drive 4 117543, Singapore
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /country="Singapore"
FT                   /db_xref="taxon:12178"
FT                   /mol_type="mRNA"
FT                   /organism="Cymbidium mosaic virus"
FT                   /specific_host="Aranda Noorah Alsagoff"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5K6C6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProt/TrEMBL:Q5K6C6"
FT                   /note="viral encapsulation and long distance movement"
FT                   /product="coat protein"
FT                   /protein_id="AAQ03199.1"
FT                   /translation="MGEPTPTPAATYSAADPTSSPKLADLTAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGVCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
XX
SQ   Sequence 672 BP; 136 A; 243 C; 153 G; 140 T; 0 other;

  AF405722  Length: 672  April 19, 2005 08:51  Type: N  Check: 151  ..

       1  atgggagagc ccactccaac tccagctgcc acctactccg ctgctgaccc
      51  cacttcatca cccaaactgg ccgacctcac cgccatcaag tactcaccgg
     101  tcacctcatc aatcgccaca cccgaagaga tcaaggccat aacccagctg
     151  tgggttaaca accttggcct ccccgccgac accgtaggta ccgcagccat
     201  tgatttggct cgtgcctacg ctgacgtcgg ggcttccaag tctgctaccc
     251  tgcttggtgt ctgtcccacg aagccagatg tccgccgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa tgtcaccccc cgccagtttt gcgcttatta
     351  cgcaaaagtg gtgtggaatc tgatgctagc caccaatgat ccgcccgcca
     401  attgggccaa ggctggtttc caggaggata cccggtttgc tgcctttgac
     451  ttcttcgatg ccgtcgactc caccgccgct ttggaacccg ctgaatggca
     501  acgtcgccct accgaccgtg agcgtgccgc ccactcaatc gggaagtacg
     551  gtgctcttgc ccgacagcgc atccagaacg gcaacctcat taccaacatt
     601  gccgaggtta ccaagggcca tcttggctcc actaacaccc tctatgctct
     651  gcctgcaccc cctactgaat aa