Sequence of DPV Wheat streak mosaic virus
Wheat streak mosaic virus isolate CO85 polyprotein gene, partial cds.
ACC No: AF511601
Dated: 2003-06-20 | Length: 1267 | CRC: -1791462208
!!NA_SEQUENCE 1.0 ID AF511601 standard; RNA; VRL; 1267 BP. XX AC AF511601; XX SV AF511601.1 XX DT 06-JUN-2002 (Rel. 72, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 2) XX DE Wheat streak mosaic virus isolate CO85 polyprotein gene, partial cds. XX KW . XX OS Wheat streak mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Tritimovirus. XX RN [1] RP 1-1267 RX MEDLINE; 22317629. RX PUBMED; 12429516. RA Stenger D.C., Seifers D.L., French R.; RT "Patterns of polymorphism in wheat streak mosaic virus: sequence space RT explored by a clade of closely related viral genotypes rivals that between RT the most divergent strains"; RL Virology 302(1):58-70(2002). XX RN [2] RP 1-1267 RA Stenger D.C., Seifers D.L., French R.; RT ; RL Submitted (14-MAY-2002) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA XX DR GOA; Q8JR10. DR SPTREMBL; Q8JR10; Q8JR10. XX FH Key Location/Qualifiers FH FT source 1. .1267 FT /db_xref="taxon:31741" FT /mol_type="genomic RNA" FT /organism="Wheat streak mosaic virus" FT /isolate="CO85" FT CDS <1. .1134 FT /codon_start=1 FT /db_xref="GOA:Q8JR10" FT /db_xref="SPTREMBL:Q8JR10" FT /note="coat protein cistron of polyprotein" FT /product="polyprotein" FT /protein_id="AAM48195.1" FT /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGT FT GSASSSGSAQSSQSASTASGSGSSSSGSGSGAAGGSGSGSAQTQSNNVSVMAGLDTGGA FT KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLVFPTPKITTKAIYMPKTVRDKIK FT PEMINNMIRYQPRAELIDNRYATTEQLNTWIKEASEGLDVTEDVFINTLLPGWVYHCII FT NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE FT SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK FT LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA" XX SQ Sequence 1267 BP; 386 A; 269 C; 346 G; 266 T; 0 other; AF511601 Length: 1267 July 1, 2003 08:55 Type: N Check: 1398 .. 1 gttgaggatt tgtacttgac tgggactcga acggatttag gagaggagat 51 taaagaatgt ggagagcaat actgcgtgta cgaatcgagt gaggccgcaa 101 ccgacgcagt cttggcggca gcaaatgcag gaactggtag tgcatcgagt 151 agtggaagtg ctcaatcaag tcagagcgca agtactgcta gcggatcagg 201 gagctcatca tcaggatcag gttctggagc agcgggtgga tcaggttctg 251 gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctcgac 301 acgggaggag ctaagacagg tcaaggatca ggatcaaaag ggacgggtgg 351 ttcattcaca tcgaatcccg tgcgaactgg aggccgagca acggatgtgc 401 aagatcagac accaggttta gtgtttccaa caccaaagat cacaacaaag 451 gccatataca tgccaaaaac tgtacgcgac aagataaaac ctgaaatgat 501 aaataacatg atcagatacc aaccgcgtgc ggaacttatc gacaacagat 551 atgcaacaac tgaacaactc aacacctgga taaaagaggc atctgaaggg 601 cttgacgtga cagaggatgt tttcataaac accttgcttc caggatgggt 651 ctaccactgc ataatcaaca caacgagccc agagaacaga gcactaggaa 701 cttggcgtgt tgtgaacaat gcaggcaagg acaatgagca gcaactcgag 751 tttaaaattg agccgatgta caaagctgcg aagccatcac ttcgagccat 801 tatgcgccac tttggtgagg gagcccgagt gatgatcgag gagagtgttc 851 ggattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta 901 agcatcaaca atattgtggc agcgtgtgat ttcatcatgc gcggtgcaga 951 tgacacacca aattttgtgc aagtgcagaa cagcgttgca gtaaacaggc 1001 tacgcggaat acagaacaag ctgtttgcac aggcacgact gagtgcgggt 1051 actaatgagg acaactcacg tcatgatgca gatgatgtga gggagaacac 1101 gcacagtttc aatggtgtaa acgctcttgc gtgagcacag tagaaactac 1151 aaatccacga gtaccaggat ttgagcgaaa taacgctgcg tttcgttaac 1201 ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tgcattcttg 1251 gtagctatgt gtgggtt