Sequence of DPV Wheat streak mosaic virus
Wheat streak mosaic virus isolate CO87 polyprotein gene, partial cds.
ACC No: AF511602
Dated: 2003-06-20 | Length: 1267 | CRC: -1132521780
!!NA_SEQUENCE 1.0 ID AF511602 standard; RNA; VRL; 1267 BP. XX AC AF511602; XX SV AF511602.1 XX DT 06-JUN-2002 (Rel. 72, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 2) XX DE Wheat streak mosaic virus isolate CO87 polyprotein gene, partial cds. XX KW . XX OS Wheat streak mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Tritimovirus. XX RN [1] RP 1-1267 RX MEDLINE; 22317629. RX PUBMED; 12429516. RA Stenger D.C., Seifers D.L., French R.; RT "Patterns of polymorphism in wheat streak mosaic virus: sequence space RT explored by a clade of closely related viral genotypes rivals that between RT the most divergent strains"; RL Virology 302(1):58-70(2002). XX RN [2] RP 1-1267 RA Stenger D.C., Seifers D.L., French R.; RT ; RL Submitted (14-MAY-2002) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA XX DR GOA; Q8JR09. DR SPTREMBL; Q8JR09; Q8JR09. XX FH Key Location/Qualifiers FH FT source 1. .1267 FT /db_xref="taxon:31741" FT /mol_type="genomic RNA" FT /organism="Wheat streak mosaic virus" FT /isolate="CO87" FT CDS <1. .1134 FT /codon_start=1 FT /db_xref="GOA:Q8JR09" FT /db_xref="SPTREMBL:Q8JR09" FT /note="coat protein cistron of polyprotein" FT /product="polyprotein" FT /protein_id="AAM48196.1" FT /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGT FT GSEPSSGSTQSSLSASIASGSGSSPSGSGSGAVGESGSGSAQTQSNNVSAMAGLDMGGT FT KTGQGSGSKGTSGSFVSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIK FT PEMINNMIKYQPRAELIDNRYATTEQLNTWIEEASEGLDVTEEVFINTLLPGWVYHCII FT NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE FT SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK FT LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA" XX SQ Sequence 1267 BP; 385 A; 267 C; 348 G; 267 T; 0 other; AF511602 Length: 1267 July 1, 2003 08:55 Type: N Check: 779 .. 1 gttgaggatt tgtacttgac tgggactcga acggatttag gagaggagat 51 taaggaatgt ggagagcaat actgcgtgta cgaatcgagt gaggccgcaa 101 ccgacgctgt cttggcggca gcaaatgcag gaactggtag tgaaccgagc 151 agtggaagta ctcaatcaag tctgagcgca agtattgcta gcggatcagg 201 gagctcacca tcaggatcag gttctggagc agtgggtgaa tcaggttctg 251 gatcagcaca aacacaatct aataacgtat ctgccatggc tggcctcgac 301 atgggaggaa ctaagacagg tcaaggatca ggatcaaaag ggacgagtgg 351 ttcattcgta tcgaatcccg tgcgaactgg aggccgagca acggatgtgc 401 aagatcagac accagggtta gtgtttccag caccaaagat cacaacaaag 451 gccatataca tgccaaaaac tgtacgcgac aagataaagc ctgaaatgat 501 aaataacatg atcaaatacc aaccgcgtgc ggaacttatc gacaacagat 551 atgcaacaac tgaacagctc aacacctgga tagaagaggc atctgaaggg 601 cttgacgtga cagaggaagt tttcataaac accttacttc caggatgggt 651 ctaccactgc ataatcaaca caacgagccc agagaacaga gcactaggaa 701 cttggcgtgt tgtgaataat gcaggcaagg acaatgagca gcaactcgag 751 tttaaaattg aaccgatgta caaagccgcg aagccatcac ttcgagccat 801 tatgcgtcac tttggcgagg gagctcgagt gatgatcgag gagagtgttc 851 ggattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta 901 agcatcaaca atattgtggc agcgtgtgat ttcattatgc gcggtgcaga 951 tgacacacca aattttgtgc aagtgcagaa cagcgttgca gtgaacaggc 1001 tacgcggaat acagaacaag ctgtttgcac aggcacgact gagtgcgggt 1051 actaatgagg acaactcacg tcatgatgca gatgatgtga gggagaacac 1101 gcacagtttc aatggtgtaa acgctcttgc gtgagcacag tagaaaccac 1151 aaatccacga gtaccaggat ttgagcggaa taacgctgcg tttcgttaac 1201 ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tgcattcttg 1251 gtagctatgt gtgggtt