Sequence of DPV Wheat streak mosaic virus
Wheat streak mosaic virus isolate LG92 polyprotein gene, partial cds.
ACC No: AF511626
Dated: 2009-02-19 | Length: 1267 | CRC: 28251526
ID AF511626; SV 1; linear; genomic RNA; STD; VRL; 1267 BP. XX AC AF511626; XX DT 06-JUN-2002 (Rel. 72, Created) DT 19-FEB-2009 (Rel. 99, Last updated, Version 5) XX DE Wheat streak mosaic virus isolate LG92 polyprotein gene, partial cds. XX KW . XX OS Wheat streak mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Tritimovirus. XX RN [1] RP 1-1267 RX DOI; 10.1006/viro.2001.1569. RX PUBMED; 12429516. RA Stenger D.C., Seifers D.L., French R.; RT "Patterns of polymorphism in wheat streak mosaic virus: sequence space RT explored by a clade of closely related viral genotypes rivals that between RT the most divergent strains"; RL Virology 302(1):58-70(2002). XX RN [2] RP 1-1267 RA Stenger D.C., Seifers D.L., French R.; RT ; RL Submitted (14-MAY-2002) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA XX FH Key Location/Qualifiers FH FT source 1. .1267 FT /organism="Wheat streak mosaic virus" FT /isolate="LG92" FT /mol_type="genomic RNA" FT /db_xref="taxon:31741" FT CDS <1. .1134 FT /codon_start=1 FT /product="polyprotein" FT /note="coat protein cistron of polyprotein" FT /db_xref="GOA:Q8JQY5" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:Q8JQY5" FT /protein_id="AAM48220.1" FT /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGT FT GSASSSGSTQSSQSASTASGSGSSPSGSGSGAAGGSGSGSAQTQSNNVSVMAGLDTGGA FT KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIK FT PEMINNMIKYQPRAELIDNRYATTEQLNTWIKEASEGLDVTEDVFINTLLPGWVYHCII FT NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE FT SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK FT LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA" XX SQ Sequence 1267 BP; 387 A; 270 C; 342 G; 268 T; 0 other; af511626 Length: 1267 19-FEB-2009 Type: N Check: 2155 .. 1 gttgaggatt tgtacttgac tgggacccga acggatttag gagaagagat 51 taaggaatgt ggagagcaat actgcgtgta cgaatcgagt gaggccgcaa 101 ccgacgctgt cttggcggca gcaaatgcag gaactggtag tgcatcgagt 151 agtggaagta ctcaatcaag tcagagcgca agtactgcta gcggatcagg 201 gagttcacca tcaggatcag gttctggagc agcgggtgga tcaggttctg 251 gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctcgac 301 acgggaggag ctaagacagg tcaaggatca ggatcaaaag ggacgggtgg 351 ttcattcaca tcgaatcccg tgcgaactgg aggccgagca acggatgtgc 401 aagatcagac accaggttta gtgtttccag caccaaagat cacaacaaag 451 gccatataca tgccaaaaac tgtacgcgac aagataaaac ctgaaatgat 501 aaataacatg atcaaatacc aaccgcgtgc tgaacttatc gacaacagat 551 atgccacaac tgaacaactc aacacctgga taaaagaggc atctgaaggg 601 cttgacgtga cagaggatgt tttcataaac accttacttc caggatgggt 651 ctaccactgc ataatcaaca caacgagccc agagaacaga gcactaggaa 701 cttggcgtgt tgtgaacaat gcaggcaagg acaatgagca gcaactcgag 751 tttaagattg aaccgatgta caaagctgcg aagccatcac ttcgagccat 801 tatgcgccac tttggtgagg gagctcgagt gatgatcgag gagagtgttc 851 gaattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta 901 agcatcaaca atattgtggc agcgtgtgat ttcatcatgc gcggtgcaga 951 tgacacacca aattttgtgc aagtgcagaa cagcgttgca gtaaacaggc 1001 tacgcggaat acagaacaag ctgtttgcac aggcacgact gagtgcgggt 1051 actaatgagg acaactcacg tcatgatgca gatgatgtga gggagaacac 1101 gcacagtttc aatggtgtaa acgctcttgc gtgagcacag tagaaactac 1151 aaatccacga gtaccaggat ttgagcgaaa taacgctgcg tttcgttaac 1201 ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tgcattcttg 1251 gtagctatgt gtgggtt