Sequence of DPV Gremmeniella mitovirus S1
Gremmeniella abietina mitochondrial RNA virus S1 putative RNA-dependent RNA polymerase gene, complete cds.
ACC No: AF534641
Dated: 2008-12-16 | Length: 2572 | CRC: -248159392
ID AF534641; SV 1; linear; genomic RNA; STD; VRL; 2572 BP. XX AC AF534641; XX DT 10-SEP-2002 (Rel. 73, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Gremmeniella abietina mitochondrial RNA virus S1 putative RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Gremmeniella mitovirus S1 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae; OC Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2572 RX DOI; 10.1007/s00705-003-0195-5. RX PUBMED; 14648296. RA Tuomivirta T.T., Hantula J.; RT "Gremmeniella abietina mitochondrial RNA virus S1 is phylogenetically RT related to the members of the genus Mitovirus"; RL Arch. Virol. 148(12):2429-2436(2003). XX RN [2] RP 1-2572 RA Tuomivirta T.T., Hantula J.; RT ; RL Submitted (05-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Vantaa Research Centre, Finnish Forest Research Institute, Jokiniemenkuja 1 RL P.O. Box 18, Vantaa 01301, Finland XX CC Name: Gremmeniella abietina mitochondrial RNA virus S1 putative CC replicase gene, complete cds. XX FH Key Location/Qualifiers FH FT source 1. .2572 FT /organism="Gremmeniella mitovirus S1" FT /host="Gremmeniella abietina type A" FT /isolate="Luu7" FT /serotype="type A, LTT" FT /mol_type="genomic RNA" FT /db_xref="taxon:204819" FT CDS 254. .2479 FT /codon_start=1 FT /transl_table=4 FT /product="putative RNA-dependent RNA polymerase" FT /protein_id="AAN05635.1" FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFKCLTKHLKHHGIVST FT VKIFKQIRLHVTRYLCGSPLRINSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKK FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN FT PLNDWEDNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCNINKFKDYIILGDDIVIHNDNIA FT KKYIEIMGKLGVGLSNSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL FT NNTFGYSTYDHKRSFLISKDYSKDLPGPKIMQDLISYVISTGLSNLTVESVNKSLKFVD FT TIIDNKNLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI FT LPIMKGSNRKILELQTIGKIYQNGIQEINNSEFEIFGSSQMIHPNESLGIQEGSSLNSF FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN" XX SQ Sequence 2572 BP; 940 A; 393 C; 395 G; 844 T; 0 other; af534641 Length: 2572 16-DEC-2008 Type: N Check: 7617 .. 1 ggtgtttaca ccttaaataa gtgtaaacag ggctaatcac ccggccaagt 51 attattttct tggtcccagt tagcaatact atgagagtat tctagatttc 101 ttcgagtgtc ccttttggtt aatttctgaa ggctggaaac tccaaccgtt 151 ggaaataccc tgcaaaagag ctaggttata gcatcgtaga taactataat 201 tgctcttggg ccgcaagtcg gctatgcggt acaaccgtta agacttaatt 251 attatgaaca aaaatttatt tcaaatagta attaaactat tcgtaatgat 301 atttttgaac actgatgtta agctcttcgt atctctttat tttaaatgtt 351 taacaaaaca tttaaaacac cacggaatag tgagtactgt aaaaatattt 401 aaacaaataa gattacatgt gactcgctat ctttgtggat caccattgag 451 aataaactca atgatgatag ggatagataa agatggttga ccaaaaatga 501 tcaatttcct aaaacctctt gccaatggta cgagatctga taaacaatta 551 cttttatcaa tcttgttcat tacgagaagt tttgtggaaa aagacaagag 601 taaactagtt cctgattgaa gtacaataac acaaccccga acaactcaaa 651 aggaatatat tatcccttct ggatttatta aggattgagt attgaacaat 701 catttaggta cttataaaag tgaatttgat gattctaatc attttgtttc 751 agtgaagagt agtcctactg gaccatcaac actgacagca ttatgaggac 801 tatgaaatca tagttacgaa tcatttaatt gactttttaa gattactagt 851 ttatctggtg ttgattatct tacaaaaatc atgaattgga cttgattaaa 901 agacctagga aataaaaaga ataataaatg atccaaacaa tttttaggat 951 ctttatcatt aatttatgac ccagaatgta aagttaggat agtagctatg 1001 ttagattata caacacagct atttctccga cctatacata atgacttgtt 1051 taaacttctt aagaagttac cacaagatag gacttttact caaaatcctt 1101 taaatgattg agaagataat gaacactcat tttgatcaat cgaccttacg 1151 gctgcaactg atagatttcc aataagttta cagcgtcggt tattactata 1201 tatctatagt gatcccgaaa ttgcaaattc ttgacaaaat ctattagtac 1251 atagagaata tgctcgtaat gggctgaatc caataaaata ttctgttgga 1301 cagcccatgg gagcatattc atcctgacct gctttcacat tatctcatca 1351 tcttgtagtt cattgatgtg cacatttgtg taacattaat aaatttaaag 1401 attatataat tcttggtgat gatatcgtta tacataatga taacattgca 1451 aagaagtata ttgagataat gggaaagtta ggagtgggtc tatctaatag 1501 taaaactcat gtatctaaag atacttatga atttgctaaa agatgaatcc 1551 ataaaggaca agaaatatcg ccattaccta ttacaggaat tgttaataat 1601 ataacaaatc cctatatagt gttaatgaat ttatacgatt tctttaaaat 1651 caaaagaaac cagtataact tctcaggtga tatactaact atgttattaa 1701 aattatacca aggtttaaaa atttacaaag gagataaaag taaaaaacat 1751 tattacttat ctcttaatag atttaaaaat cttgatatat ttttatttgc 1801 gctgaataat accttcggat actcaacata tgatcataaa agatcatttt 1851 tgatttccaa agattacagt aaggatttac caggaccaaa aataatgcaa 1901 gatttaatat cttacgtaat tagtactggt ttatctaatc ttactgtgga 1951 aagtgtaaat aaatcactta agttcgttga tactataata gataataaaa 2001 atctattaaa tatcgaagat cctaatgatt tatctaacct tccattattc 2051 aaaggttttc aagcttatat ctctaatctt cgaaaaactg tcgaggggtg 2101 aaataataaa tcaatttcac ttatcgaagc ttctagagga ttagtccaga 2151 tggatatact tccaattatg aaaggttcta ataggaaaat tttagaactt 2201 caaacaattg gaaaaatata ccaaaatgga atacaagaaa taaataatag 2251 tgaatttgaa atttttggtt cctcccaaat gatacaccca aacgaaagtt 2301 taggtattca agaaggaagt tccttaaatt cattttcatc attatcatct 2351 agtatagata ctaacttggt ttttatccag aatgagttaa atgttatagc 2401 taagaagaac tgaatgcctc ctgcaactga agattcagtt gcggattcat 2451 atgcagcctt cgcagctatg ttcaattaat atcattaccg aatacagttg 2501 caaatctaga tactcaaaaa ctatattgag tctagactcc aactggggtt 2551 ttacacatat gtgtaaaaca cc