Sequence of DPV Gremmeniella mitovirus S1
Gremmeniella abietina mitochondrial RNA virus S1 putative RNA-dependent RNA polymerase gene, complete cds.
ACC No: AF534641
Dated: 2008-12-16 | Length: 2572 | CRC: -248159392
ID AF534641; SV 1; linear; genomic RNA; STD; VRL; 2572 BP.
XX
AC AF534641;
XX
DT 10-SEP-2002 (Rel. 73, Created)
DT 16-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE Gremmeniella abietina mitochondrial RNA virus S1 putative RNA-dependent RNA
DE polymerase gene, complete cds.
XX
KW .
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OS Gremmeniella mitovirus S1
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae;
OC Mitovirus; unclassified Mitovirus.
XX
RN [1]
RP 1-2572
RX DOI; 10.1007/s00705-003-0195-5.
RX PUBMED; 14648296.
RA Tuomivirta T.T., Hantula J.;
RT "Gremmeniella abietina mitochondrial RNA virus S1 is phylogenetically
RT related to the members of the genus Mitovirus";
RL Arch. Virol. 148(12):2429-2436(2003).
XX
RN [2]
RP 1-2572
RA Tuomivirta T.T., Hantula J.;
RT ;
RL Submitted (05-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL Vantaa Research Centre, Finnish Forest Research Institute, Jokiniemenkuja 1
RL P.O. Box 18, Vantaa 01301, Finland
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CC Name: Gremmeniella abietina mitochondrial RNA virus S1 putative
CC replicase gene, complete cds.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2572
FT /organism="Gremmeniella mitovirus S1"
FT /host="Gremmeniella abietina type A"
FT /isolate="Luu7"
FT /serotype="type A, LTT"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:204819"
FT CDS 254. .2479
FT /codon_start=1
FT /transl_table=4
FT /product="putative RNA-dependent RNA polymerase"
FT /protein_id="AAN05635.1"
FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFKCLTKHLKHHGIVST
FT VKIFKQIRLHVTRYLCGSPLRINSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL
FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH
FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKK
FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN
FT PLNDWEDNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG
FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCNINKFKDYIILGDDIVIHNDNIA
FT KKYIEIMGKLGVGLSNSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM
FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL
FT NNTFGYSTYDHKRSFLISKDYSKDLPGPKIMQDLISYVISTGLSNLTVESVNKSLKFVD
FT TIIDNKNLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI
FT LPIMKGSNRKILELQTIGKIYQNGIQEINNSEFEIFGSSQMIHPNESLGIQEGSSLNSF
FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN"
XX
SQ Sequence 2572 BP; 940 A; 393 C; 395 G; 844 T; 0 other;
af534641 Length: 2572 16-DEC-2008 Type: N Check: 7617 ..
1 ggtgtttaca ccttaaataa gtgtaaacag ggctaatcac ccggccaagt
51 attattttct tggtcccagt tagcaatact atgagagtat tctagatttc
101 ttcgagtgtc ccttttggtt aatttctgaa ggctggaaac tccaaccgtt
151 ggaaataccc tgcaaaagag ctaggttata gcatcgtaga taactataat
201 tgctcttggg ccgcaagtcg gctatgcggt acaaccgtta agacttaatt
251 attatgaaca aaaatttatt tcaaatagta attaaactat tcgtaatgat
301 atttttgaac actgatgtta agctcttcgt atctctttat tttaaatgtt
351 taacaaaaca tttaaaacac cacggaatag tgagtactgt aaaaatattt
401 aaacaaataa gattacatgt gactcgctat ctttgtggat caccattgag
451 aataaactca atgatgatag ggatagataa agatggttga ccaaaaatga
501 tcaatttcct aaaacctctt gccaatggta cgagatctga taaacaatta
551 cttttatcaa tcttgttcat tacgagaagt tttgtggaaa aagacaagag
601 taaactagtt cctgattgaa gtacaataac acaaccccga acaactcaaa
651 aggaatatat tatcccttct ggatttatta aggattgagt attgaacaat
701 catttaggta cttataaaag tgaatttgat gattctaatc attttgtttc
751 agtgaagagt agtcctactg gaccatcaac actgacagca ttatgaggac
801 tatgaaatca tagttacgaa tcatttaatt gactttttaa gattactagt
851 ttatctggtg ttgattatct tacaaaaatc atgaattgga cttgattaaa
901 agacctagga aataaaaaga ataataaatg atccaaacaa tttttaggat
951 ctttatcatt aatttatgac ccagaatgta aagttaggat agtagctatg
1001 ttagattata caacacagct atttctccga cctatacata atgacttgtt
1051 taaacttctt aagaagttac cacaagatag gacttttact caaaatcctt
1101 taaatgattg agaagataat gaacactcat tttgatcaat cgaccttacg
1151 gctgcaactg atagatttcc aataagttta cagcgtcggt tattactata
1201 tatctatagt gatcccgaaa ttgcaaattc ttgacaaaat ctattagtac
1251 atagagaata tgctcgtaat gggctgaatc caataaaata ttctgttgga
1301 cagcccatgg gagcatattc atcctgacct gctttcacat tatctcatca
1351 tcttgtagtt cattgatgtg cacatttgtg taacattaat aaatttaaag
1401 attatataat tcttggtgat gatatcgtta tacataatga taacattgca
1451 aagaagtata ttgagataat gggaaagtta ggagtgggtc tatctaatag
1501 taaaactcat gtatctaaag atacttatga atttgctaaa agatgaatcc
1551 ataaaggaca agaaatatcg ccattaccta ttacaggaat tgttaataat
1601 ataacaaatc cctatatagt gttaatgaat ttatacgatt tctttaaaat
1651 caaaagaaac cagtataact tctcaggtga tatactaact atgttattaa
1701 aattatacca aggtttaaaa atttacaaag gagataaaag taaaaaacat
1751 tattacttat ctcttaatag atttaaaaat cttgatatat ttttatttgc
1801 gctgaataat accttcggat actcaacata tgatcataaa agatcatttt
1851 tgatttccaa agattacagt aaggatttac caggaccaaa aataatgcaa
1901 gatttaatat cttacgtaat tagtactggt ttatctaatc ttactgtgga
1951 aagtgtaaat aaatcactta agttcgttga tactataata gataataaaa
2001 atctattaaa tatcgaagat cctaatgatt tatctaacct tccattattc
2051 aaaggttttc aagcttatat ctctaatctt cgaaaaactg tcgaggggtg
2101 aaataataaa tcaatttcac ttatcgaagc ttctagagga ttagtccaga
2151 tggatatact tccaattatg aaaggttcta ataggaaaat tttagaactt
2201 caaacaattg gaaaaatata ccaaaatgga atacaagaaa taaataatag
2251 tgaatttgaa atttttggtt cctcccaaat gatacaccca aacgaaagtt
2301 taggtattca agaaggaagt tccttaaatt cattttcatc attatcatct
2351 agtatagata ctaacttggt ttttatccag aatgagttaa atgttatagc
2401 taagaagaac tgaatgcctc ctgcaactga agattcagtt gcggattcat
2451 atgcagcctt cgcagctatg ttcaattaat atcattaccg aatacagttg
2501 caaatctaga tactcaaaaa ctatattgag tctagactcc aactggggtt
2551 ttacacatat gtgtaaaaca cc