Sequence of DPV Rice black streaked dwarf virus
Rice black streaked dwarf virus segment 9, complete sequence.
ACC No: AF540976
Dated: 2003-05-29 | Length: 1900 | CRC: 2020322381
!!NA_SEQUENCE 1.0 ID AF540976 standard; genomic RNA; VRL; 1900 BP. XX AC AF540976; XX SV AF540976.1 XX DT 29-SEP-2002 (Rel. 73, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Rice black streaked dwarf virus segment 9, complete sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; dsRNA viruses; Reoviridae; Fijivirus; Fijivirus group 2. XX RN [1] RP 1-1900 RA Li C., Zhong Y.; RT "Cloning and Expression of s9-1 gene of Rice Black-Streaked Dwarf Virus in RT Escherichia coli"; RL Unpublished. XX RN [2] RP 1-1900 RA Li C., Zhong Y.; RT ; RL Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL College of Life Science, Peking University, 5# Road Yuanmingyuan, Beijing RL 100871, P. R. China XX DR SPTREMBL; Q8BC68; Q8BC68. DR SPTREMBL; Q8BC69; Q8BC69. XX FH Key Location/Qualifiers FH FT source 1. .1900 FT /country="China:Zhengzhou" FT /db_xref="taxon:10990" FT /mol_type="genomic RNA" FT /organism="Rice black streaked dwarf virus" FT /isolate="Henan Zhengzhou" FT /specific_host="maize and rice" FT /segment="9" FT CDS 52. .1095 FT /codon_start=1 FT /db_xref="SPTREMBL:Q8BC69" FT /note="RBSDV S9-1; ORF1" FT /product="unknown" FT /protein_id="AAN28667.1" FT /translation="MADQERRTFGSYKIEELTIKNDQPNRNTNSSTSQSTENRLSTKKI FT PLLDDGIFELLNYLIDGTNFDKTCYCGFNYSHLPNLERDFNVASIYVRENFELCTENLD FT LKDYGRQANISVKSPDFTLLLEYTLKPSSEADPTIPENEKEENTKPVTPKVVSPKEEKK FT TVEMSLLPILNRESEESLSSEILEGEAAVVNVFKMYIKGFLMYLGENPNSYDRQLNIEK FT YRPLLISIIGYEHLIGTRVPNKEVNHIFYQLATFDNYPFDLLRFQLSSLISTPALIREK FT IAKEGLFKIITSNTLRGASRQTVLFRGINGSESFLNIKRYRKFRTRIVGNVDCVIKSDF FT SSLKLDV" FT CDS 1160. .1789 FT /codon_start=1 FT /db_xref="SPTREMBL:Q8BC68" FT /note="ORF2" FT /product="unknown" FT /protein_id="AAN28668.1" FT /translation="MNPQSSVNVDTYTFNCPFELAKIQIESMKPIMQDFSNFDDIFNRT FT LSDSEIDDRVEQLEVDVESKVDPIVRRRYGKIGHIIIMIISFVFFGIFKLTLKMFYHLF FT RCVCCNPLIRGILSIIFTILFYFLLCLCIYFVYYFFGDQISSAYNTLNQIDSSNFINST FT QVEEKVKNIIHDGSLFFGTRDQATGQINEIETQVVNGGTVNYTLFN" XX SQ Sequence 1900 BP; 607 A; 325 C; 313 G; 655 T; 0 other; AF540976 Length: 1900 September 11, 2003 13:47 Type: N Check: 9142 .. 1 aagtttttta gcctggaact gacacattcc tacaggaacg agcgtaagag 51 aatggcagac caagagcgga gaacgtttgg atcatataaa atagaagaat 101 tgacaattaa aaacgaccaa ccaaatagaa acacaaattc atcaacttct 151 cagtctactg aaaatcgtct ttcaaccaag aaaatccccc tactcgatga 201 cggcatcttc gaacttctga actaccttat tgatggaacc aacttcgaca 251 aaacttgcta ttgtggtttt aattattctc atctccctaa ccttgaacgt 301 gactttaacg ttgcatctat ttatgtccgc gagaattttg agttatgcac 351 tgaaaactta gatttgaaag attatggtag acaggcaaat ataagcgtga 401 aatctcctga ttttactttg cttctagaat atactcttaa accatcatca 451 gaagccgatc ctactattcc agagaatgag aaagaagaga atactaaacc 501 agttactcct aaagttgtct ctccaaaaga agagaagaaa acagttgaaa 551 tgtcgttgtt gccaattctg aaccgtgaat ctgaagaatc tttaagctct 601 gaaattcttg aaggtgaagc tgctgttgtt aatgtattca aaatgtatat 651 aaaaggcttt ttaatgtatt tgggtgaaaa tccaaactct tatgaccgtc 701 aattaaacat agaaaagtat cgtcctttgc taatttcaat catcggatat 751 gaacatctca tcggaacaag agttccaaat aaagaagtta atcacatttt 801 ttaccagttg gcgacttttg ataactaccc ttttgaccta ctgagattcc 851 agctttcttc actcatctct acacccgctt taatccgaga aaaaattgct 901 aaagaaggat tgttcaagat tattacgtca aacaccctgc gtggtgcttc 951 ccgtcaaact gtcttattta gaggaattaa tggaagtgaa tcgtttttga 1001 acatcaagag atatcgtaaa ttcaggacac gaattgttgg caatgttgat 1051 tgcgttatta aatctgattt ttcttccttg aaattggacg tttgatcttt 1101 tactttttat gttctgaaaa ttgaatatca ctggttaatg aatcatttcc 1151 tttaatttta tgaatcccca atcttcagta aatgttgata cttatacttt 1201 taactgtccc tttgaactag caaaaattca aattgaatcg atgaaaccta 1251 ttatgcaaga ttttagcaat tttgatgata tctttaatcg tacattatct 1301 gattctgaaa ttgatgatcg tgtagaacag cttgaagttg acgtcgaatc 1351 aaaagtcgat ccaattgtga gaagaagata tggtaaaatt ggacatatca 1401 tcattatgat tatcagtttt gtattttttg gtatttttaa gcttactctt 1451 aagatgtttt atcatttgtt tcgttgtgtg tgttgtaatc ctttgattag 1501 aggcatactt agtatcattt ttaccatatt attttacttt ctactgtgtt 1551 tgtgcattta ttttgtttat tacttttttg gagatcaaat ttcgtcagcg 1601 tacaatactt tgaatcaaat tgatagttct aattttataa attctactca 1651 agttgaagaa aaagttaaaa atataattca cgacggttca ctctttttcg 1701 gtactcgtga tcaagcaaca ggtcaaatta acgaaattga aactcaagtt 1751 gtaaatggtg gtactgtaaa ctatacgctt tttaattaac gtctatttta 1801 tatgactctg aaaatattca cgctcgcaag tcgattttct tacagttatg 1851 tcttttgagg tatgacaaac tcgttctcaa gccggctaac agctgatgtc