Sequence of DPV Sweet potato chlorotic stunt virus

Sweet potato chlorotic stunt virus, mRNA for coat protein, isolate S1EA-13b

ACC No: AJ010757

Dated: 2000-03-02 | Length: 1140 | CRC: 1555686045

                !!NA_SEQUENCE 1.0
ID   SPO010757  standard; RNA; VRL; 1140 BP.
XX
AC   AJ010757;
XX
SV   AJ010757.1
XX
DT   01-OCT-1998 (Rel. 57, Created)
DT   02-MAR-2000 (Rel. 62, Last updated, Version 2)
XX
DE   Sweet potato chlorotic stunt virus, mRNA for coat protein, isolate S1EA-13b
XX
KW   coat protein.
XX
OS   Sweet potato chlorotic stunt virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Crinivirus.
XX
RN   [1]
RP   1-1140
RA   Fenby N.S.;
RT   ;
RL   Submitted (28-AUG-1998) to the EMBL/GenBank/DDBJ databases.
RL   Fenby N.S., Department of Biology, Bristol University, Woodland Road,
RL   Bristol, BS8 1UG, U.K.
XX
RN   [2]
RA   Alicai T., Fenby N.S., Gibson R.W., Adipala E., Vetten J.H., Foster G.D.,
RA   Seal S.;
RT   "Occurence of two serotypes of sweet potato chlorotic stunt virus in East
RT   Africa and their associated differences in coat protein and HSP70 homologue
RT   gene sequences";
RL   Plant Pathol. 48:718-726(1999).
XX
DR   SPTREMBL; Q9YIY2; Q9YIY2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1140
FT                   /db_xref="taxon:81931"
FT                   /organism="Sweet potato chlorotic stunt virus"
FT                   /isolate="S1EA-13b"
FT   CDS             200. .973
FT                   /db_xref="SPTREMBL:Q9YIY2"
FT                   /product="coat protein"
FT                   /protein_id="CAA09348.1"
FT                   /translation="MDTEKVNDDKNFDSDSDVGFGDRNVNDNLRRRSDTIDNENVNNVG
FT                   RRDMELTSGILTSEQLALARLGKIQVYSNSPDIMSKSQEDEFKRHMESFVRQITGETTL
FT                   SSEIFASFYASLFQAWANQSTSEKNASNANLENVFMVDGKEYSWKTHSFINHMQSNMPD
FT                   VKNAARKWARAHANDYKVLVGMGIVKPDYHLQAKQGVLPEYWHLATDFMRGNDMATTAD
FT                   GLAATLMMKRNALCNKDNKNSIYNVTQLTGTGLHC"
XX
SQ   Sequence 1140 BP; 375 A; 190 C; 252 G; 323 T; 0 other;

AJ010757  Length: 1140  December 21, 2001 15:35  Type: N  Check: 9322  ..

       1  cgtctagatt gttagaaata aaaagaactg gagtcggtct cgtgaatttg
      51  ttgctaaatc tgattaatga gaattttatc tacttcgact caaataggtc
     101  taagtgtggg tttgaaaaag aggatcacgt tcttattttg caaataattc
     151  ctttattgcg tatttgaggt ttgttcttta tattatcata acttaacaga
     201  tggatactga aaaagtaaac gatgacaaga actttgactc tgactccgat
     251  gtaggtttcg gggacaggaa tgtgaacgat aatctacgaa gacgttccga
     301  tacgattgac aacgaaaacg tcaacaatgt gggaagaaga gacatggagt
     351  taaccagtgg tatattaaca tctgagcaac tggctcttgc gaggttggga
     401  aaaatacagg tttattctaa ctcaccagac attatgtcta agagtcaaga
     451  agatgaattc aagagacata tggagagttt tgtgaggcaa attacagggg
     501  aaactacatt atcttctgag atttttgcaa gtttctacgc atctctattc
     551  caagcttggg caaaccaaag tacttcggaa aagaacgcgt cgaatgcaaa
     601  tctcgagaat gtgttcatgg ttgatggtaa ggagtacagt tggaaaactc
     651  atagtttcat caatcacatg caatccaata tgcccgacgt gaagaatgct
     701  gctaggaaat gggccagggc tcacgcgaat gattataagg ttcttgttgg
     751  tatgggtata gtaaaacctg actatcattt gcaagctaaa caaggtgtat
     801  taccggagta ttggcatctt gcaaccgact tcatgagagg taatgacatg
     851  gcgacgactg cagatggatt agcagcaaca ctgatgatga aaaggaacgc
     901  tctttgtaac aaggacaaca agaattctat ttataacgta actcaattga
     951  ccggtactgg tcttcactgt tgagtatgga tatattagaa ctagaagtag
    1001  ataacattat atcgacaaat tatcccgatg atgaatccga aatagtgact
    1051  agagctgtgg gatgtaagtt caatcaagat tattctctac cttacaaaga
    1101  tagagaacaa gtcgacttct ctatacctta cacttccgcg