Sequence of DPV Ophiostoma mitovirus 4

Ophiostoma novo-ulmi mitovirus 4-Ld mRNA for putative RNA-dependent RNA polymerase

ACC No: AJ132754

Dated: 2003-01-08 | Length: 2599 | CRC: 292333836

                !!NA_SEQUENCE 1.0
ID   ONO132754  standard; RNA; VRL; 2599 BP.
XX
AC   AJ132754;
XX
SV   AJ132754.1
XX
DT   10-MAY-1999 (Rel. 59, Created)
DT   08-JAN-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Ophiostoma novo-ulmi mitovirus 4-Ld mRNA for putative RNA-dependent RNA
DE   polymerase
XX
KW   pol4 gene; RNA-dependent RNA polymerase.
XX
OS   Ophiostoma novo-ulmi mitovirus 4-Ld
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae;
OC   Mitovirus.
XX
RN   [1]
RP   1-2599
RA   Buck K.W.;
RT   ;
RL   Submitted (08-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Buck K.W., Biology, Imperial College of Science, Technology and Medicine,
RL   Imperial College Road, London, SW7 2AZ, UNITED KINGDOM.
XX
RN   [2]
RA   Hong Y., Dover S.L., Cole T.E., Brasier C.M., Buck K.W.;
RT   "Multiple mitochondrial viruses in an isolate of the Dutch elm disease
RT   fungus Ophiostoma novo-ulmi";
RL   Virology 258:118-127(1999).
XX
DR   GOA; Q9WJ22; Q9WJ22.
DR   SPTREMBL; Q9WJ22; Q9WJ22.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2599
FT                   /db_xref="taxon:88387"
FT                   /virion
FT                   /organism="Ophiostoma novo-ulmi mitovirus 4-Ld"
FT   CDS             205. .2556
FT                   /db_xref="GOA:Q9WJ22"
FT                   /db_xref="SPTREMBL:Q9WJ22"
FT                   /transl_table=4
FT                   /gene="pol4"
FT                   /product="RNA-dependent RNA polymerase, putative"
FT                   /protein_id="CAB42652.1"
FT                   /translation="MKRNNLQIIIIKRLILHIFKINLSVEIDKFLGFINHLRKSNGLLY
FT                   TIKYMKAAKLHITRYMCGKPLYSNNENVALDKTGFPLRFWYLKRLVNDNPRALLTLLTY
FT                   TRRIVPNKSESKARIVKLSTITDPYKGKVYTIPKWFILDFISKYNLSSTKPIYTDNDHY
FT                   LSIKGSPNGKASMSSLYSIISFNSSNIRYLFNIVGDYQLVLNKFYQDLSQFYTKYINRD
FT                   KLGLGKLSIVHDPELKERVIAMVDYTTQFALRPIHNILLNNLSKLPCDRTFTQDPFHKW
FT                   NDDHKERYHSLDLSAATDRFPIFLQQKLISLIFNDYEFGKNWRNLLVDRNYDYQGISYR
FT                   YSVGQPMGAYTSWAAFTLTHHLVVHWAAELAGLKNFKDYIILGDDIVIKNNKVAQIYIN
FT                   LMTKWGVDISLSKTHVSYDTYEFAKRWIKNGKEISGISLKGILTNIRHIHVVYMNIFTY
FT                   LQRIPSLNVDILTCVGKLYGYLLIRNRIKSPNTIKRSLYDFHHSIRYSFGLLNYEEIRN
FT                   YLHNKFPFDNYYAWPERLVHSKLNEIFKLEMVESAKSFSKDFMNQSTMLINTVTDNEIM
FT                   VQWPLYKGFMNHIEKLKDYIKSKQNQHDIDLLDLMQNLRFQNLDSIVKKLRNSYTNLIM
FT                   LDKFWKSAFNREYRDLERESILTIEKQESNMMSRIWDMALSYRTSPMSYSTLTFETDSE
FT                   FYMMPSIWDMASSSTTGPKPFTTATFKTDFVGLSTFDDKLLKDLENLKIDITLRTGKYT
FT                   NKTQPLESKIHQHPIECIEDNKVPNFNNIK"
XX
SQ   Sequence 2599 BP; 1015 A; 333 C; 362 G; 889 T; 0 other;

AJ132754  Length: 2599  January 14, 2003 16:47  Type: N  Check: 2587  ..

       1  cttattatcc ctttaaaggg ataataggga ggaatatcct catacactaa
      51  gttaaggtgt atctagacat agagaaaact atgttgaagt attaagttca
     101  cataggtgaa ttgcttaata taaatatgaa tagctcggag ttctgtttaa
     151  ggataaacac ttaaataagt ttgactttaa caaataaatt aaaattaaaa
     201  tcatatgaaa agaaacaatc ttcaaataat aattattaaa agacttatct
     251  tacatatttt taaaattaac ttaagtgttg aaattgataa atttcttggt
     301  ttcataaatc atttaagaaa aagtaatggt ttattataca ctatcaagta
     351  tatgaaagct gcaaagcttc atataacaag atatatgtgt ggtaaaccat
     401  tatattctaa taatgaaaat gttgcacttg ataaaactgg ttttccttta
     451  agattttgat atcttaaaag attagttaat gataatccta gagcattgtt
     501  aacattgtta acgtatactc gtcgtatagt tcctaataaa tcagaatcta
     551  aagctaggat agttaagtta agtactatta ctgatcctta caaaggaaaa
     601  gtatatacta tacctaaatg atttatatta gattttatat ctaaatataa
     651  tctatcatca acaaaaccca tttatactga taatgatcat tatctaagca
     701  taaaaggttc tccaaatgga aaagcttcaa tgtctagtct atattcaatt
     751  atcagtttta attcatctaa tattagatat ttattcaata ttgttggtga
     801  ttaccaactt gtattaaata aattctacca agatttatca caattttata
     851  cgaaatatat aaatagagat aaacttgggt taggtaaatt atcaattgtg
     901  catgatcctg aattaaaaga aagagtaatt gctatggttg attataccac
     951  acaatttgcc cttcgtccta tacataatat tttacttaat aatttaagca
    1001  aactaccatg tgatagaact tttacccagg atccatttca taaatgaaat
    1051  gatgatcaca aagaaagata ccactcactt gacttatcag ctgcaacaga
    1101  tagatttcca atattcttac aacaaaaact tatatcatta atatttaatg
    1151  attatgagtt tggtaaaaat tggagaaatc tattagtaga tcgtaactat
    1201  gattaccaag gaatatcata tagatattca gttggacaac caatgggagc
    1251  gtatactagt tgagctgcct ttaccttgac acatcatctt gtagttcatt
    1301  gagctgctga attagcaggc ttaaagaatt ttaaggatta tataatatta
    1351  ggtgatgata ttgtaattaa aaacaataaa gttgctcaaa tatatataaa
    1401  tcttatgaca aaatgaggtg ttgatatatc tttatcaaaa acacatgtat
    1451  cttatgatac ttatgaattt gctaaaagat gaatcaaaaa tggtaaagag
    1501  ataagtggaa tatctttaaa aggaatctta actaatatta gacatattca
    1551  tgttgtatat atgaatatat ttacatattt acaaagaatt ccttctctaa
    1601  atgtagatat tttaacttgt gtaggtaaat tatatggtta tcttttaata
    1651  agaaatcgga ttaaatctcc gaatactatt aaaagatcac tatatgattt
    1701  ccaccactca ataagatatt catttggatt attaaattat gaagaaataa
    1751  gaaattatct tcataacaaa tttccatttg ataattatta tgcctgacct
    1801  gaaagattag ttcattcaaa attgaatgag atcttcaagt tagaaatggt
    1851  ggaaagtgca aaatcttttt ctaaagattt catgaatcaa agtacaatgt
    1901  taataaacac tgtaactgat aatgaaatta tggttcaatg acctttatat
    1951  aaaggtttta tgaatcatat agaaaaactg aaggattaca taaaatctaa
    2001  acaaaatcaa catgatattg atttattaga tttaatgcaa aatcttagat
    2051  tccaaaattt agattccata gttaagaagt taagaaattc ttatacaaac
    2101  ttaattatgt tagataaatt ttggaaatca gctttcaata gagagtatag
    2151  agaccttgaa agggaatcca tacttactat tgaaaagcaa gagtctaata
    2201  tgatgtctag aatttgagat atggccttgt cttataggac gagtccaatg
    2251  tcatattcta cactaacatt cgagactgat tcagagtttt atatgatgcc
    2301  tagtatttga gatatggcct cgtcttcaac aacgggacca aagccattta
    2351  ctactgcaac attcaaaact gattttgtag gtttgagtac tttcgatgat
    2401  aaactattaa aagatttaga aaatcttaaa atagatatca ctttaagaac
    2451  tgggaaatat accaataaga cacaaccttt agaatcaaag atacatcaac
    2501  atccaattga atgtattgaa gataataaag tacctaattt taacaatatt
    2551  aagtaagtct gggtatgtta ccccttatta tcctgtaaag gataataag