Sequence of DPV Ophiostoma mitovirus 5

Ophiostoma novo-ulmi mitovirus 5-Ld mRNA for putative RNA-dependent RNA polymerase

ACC No: AJ132755

Dated: 2003-01-08 | Length: 2474 | CRC: 1892766319

                !!NA_SEQUENCE 1.0
ID   ONO132755  standard; RNA; VRL; 2474 BP.
XX
AC   AJ132755;
XX
SV   AJ132755.1
XX
DT   10-MAY-1999 (Rel. 59, Created)
DT   08-JAN-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Ophiostoma novo-ulmi mitovirus 5-Ld mRNA for putative RNA-dependent RNA
DE   polymerase
XX
KW   pol5 gene; RNA-dependent RNA polymerase.
XX
OS   Ophiostoma novo-ulmi mitovirus 5-Ld
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae;
OC   Mitovirus.
XX
RN   [1]
RP   1-2474
RA   Buck K.W.;
RT   ;
RL   Submitted (08-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Buck K.W., Biology, Imperial College of Science, Technology and Medicine,
RL   Imperial College Road, London, SW7 2AZ, UNITED KINGDOM.
XX
RN   [3]
RA   Hong Y., Dover S.L., Cole T.E., Brasier C.M., Buck K.W.;
RT   "Multiple mitochondrial viruses in an isolate of the Dutch elm disease
RT   fungus Ophiostoma novo-ulmi";
RL   Virology 258:118-127(1999).
XX
DR   GOA; Q9WJ23; Q9WJ23.
DR   SPTREMBL; Q9WJ23; Q9WJ23.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2474
FT                   /db_xref="taxon:88388"
FT                   /virion
FT                   /organism="Ophiostoma novo-ulmi mitovirus 5-Ld"
FT   CDS             228. .2417
FT                   /db_xref="GOA:Q9WJ23"
FT                   /db_xref="SPTREMBL:Q9WJ23"
FT                   /transl_table=4
FT                   /gene="pol5"
FT                   /product="RNA-dependent RNA polymerase, putative"
FT                   /protein_id="CAB42653.1"
FT                   /translation="MKKINKTIKILLSIYFNRKYSSYGIRWIVTVERMRKINGLKFTIK
FT                   YMKAVKLHITKYIANERLLSISGSRVSVDKDGFPTKFNYIKHIIDSGDIDGIRFVMTLL
FT                   TYTRAINPTKKEYLKIFPDYSTITNEFTGSNKIAIPNKIIKEFVDYYKLANPNNNNNPE
FT                   LQWSRDDHYLSFKSSPNGQSTLHSSYGLFSMIFVGHTILENILKIVGEKQYHEIIGNHI
FT                   KKLYHDHRLFIPGKIDYLFGKISIVKDPELKMRVIAMVDYHSQFVLKKIHNSLFNKLKL
FT                   IKSDRTFTQDPIFTTPTMGHRFWSMDLSAATDRFPIDLQERLLSYLYGSEISSAWKQLL
FT                   IDRTYKTPEGDELHYKVGQPMGAYSSWAAFTLTHHLVVFYSARMAGIKDFTNYILLGDD
FT                   IVINNDKVAKYYIRTMKRLGVELSMNKTHVSKNTYEFAKRWFKNKKEITGLPLRGILNN
FT                   LNNYGIVFQELFKFHYKYPHLTNVKLTDIMFIIFKGLKIKGRIITNSQLRFNLMKINFL
FT                   LRYINKLVNFDETRLFYTKFIKSEDISMVNEHNFLDFTRGMLKLGLTQKIENSVKELKT
FT                   FYDDVLKNSFISNIENKNDLQYEPLINGLYNKMLIMRNSIDRIVRNKDFDIIDAMNDMR
FT                   LDNPEAYLEKIKNSNKPLSNLNDMFNTAKKRIKEINEYNSEYFQDIYDFDNFSNFRPYE
FT                   SYYRAELSTQIDNLDMIRGAYWRDPQKETEMLQYW"
XX
SQ   Sequence 2474 BP; 976 A; 312 C; 352 G; 834 T; 0 other;

AJ132755  Length: 2474  January 14, 2003 16:47  Type: N  Check: 1493  ..

       1  aattgaagtt cttcaaaaga agaactttaa ttgtactaag taccaaccat
      51  tcacatggtt gccaaacata ttaccagatt aatttattaa tttaaattaa
     101  acgttctgga atatagtccg atccttttta tccgctactc cttttcagaa
     151  gtaacccatt tgttacctat gactaggcac taaggctcat cagttcggat
     201  caaataataa atataaacta taaacatatg aaaaaaataa acaaaacaat
     251  aaaaatctta ttgtctatct atttcaatcg taagtacagt tcatatggaa
     301  ttagatgaat tgtaacagta gaacgtatga gaaagataaa tggtcttaaa
     351  ttcacaatta agtatatgaa agctgttaag cttcatatta ctaaatatat
     401  tgcaaatgaa agattattat cgatttcagg ttctcgtgtt agtgttgata
     451  aagatggttt cccaacaaag tttaattata ttaaacatat aattgactct
     501  ggtgatatag atggtattag atttgtaatg acattattaa cttatactag
     551  ggctataaac ccaactaaaa aggaatattt aaaaatattt cctgattata
     601  gtacaattac taatgaattc acaggttcta ataaaatcgc gattcctaat
     651  aaaattatta aagaatttgt tgattattat aaattagcaa atcctaataa
     701  taataataat ccagaattac aatgaagtag agatgatcat tatttgagtt
     751  ttaaaagctc gcctaatggt caatctacat tacatagtag ctatggatta
     801  ttttcaatga tatttgttgg tcacacaatt ttagaaaaca ttctaaaaat
     851  tgttggtgaa aaacaatatc atgaaattat tggaaatcat attaaaaagt
     901  tatatcatga tcacaggtta tttatacctg gaaaaattga ttatcttttt
     951  ggaaaaatat ctatagttaa agaccctgaa ttaaaaatga gagtaattgc
    1001  aatggttgat taccattcgc aatttgttct caagaaaatt cataattcac
    1051  tatttaataa gttaaaactc attaaaagtg ataggacttt tactcaagat
    1101  ccaatcttta ctacaccaac aatgggtcat agattttgat ctatggacct
    1151  atctgctgca actgatcgtt tccccattga cctacaagag agattacttt
    1201  catatctata tggaagtgag atctcaagtg catgaaaaca gttattaatc
    1251  gatagaacat ataaaactcc ggaaggtgac gaacttcatt ataaagttgg
    1301  ccaacctatg ggagcatata gttcttgagc tgcttttacc ttaactcatc
    1351  atcttgtagt attttattca gctagaatgg ctggaataaa agacttcact
    1401  aattatatac tattaggtga cgatattgtt atcaataacg ataaagttgc
    1451  taagtattat attagaacga tgaagagact gggggttgaa ttatcaatga
    1501  acaaaactca tgtatcaaaa aatacatatg agtttgctaa aagatgattc
    1551  aaaaataaaa aagaaataac tggtcttccg ttaagaggta ttttaaataa
    1601  tctaaataac tatggaattg tattccaaga attatttaaa tttcattata
    1651  aatacccaca tttaacaaat gtaaaattaa ctgatattat gtttattatc
    1701  tttaaaggat taaagattaa aggtagaatt attactaatt ctcaattaag
    1751  atttaatcta atgaagataa attttttact aagatatatt aacaaattag
    1801  taaattttga tgaaactaga ttgttttata caaaatttat aaaatctgaa
    1851  gatatatcaa tggtaaatga gcataatttc cttgatttta ctcgagggat
    1901  gctaaaatta gggttaacac aaaagattga aaattctgtt aaagaactta
    1951  aaacttttta tgatgacgta ttaaaaaaca gttttatttc taatatagaa
    2001  aataaaaatg atttacaata cgaaccctta atcaatggtc tttataacaa
    2051  aatgcttata atgaggaatt ctattgatag aattgttcga aataaggatt
    2101  ttgatataat tgatgcaatg aatgatatga gattagataa cccagaggct
    2151  tatttagaaa aaattaaaaa ttctaataaa cctttaagta atcttaatga
    2201  catgttcaac actgcaaaga aacgtattaa ggaaatcaat gagtataatt
    2251  ctgaatattt tcaggatata tacgattttg ataactttag taatttcaga
    2301  ccgtatgaat cttattatag agctgaatta tcaacacaaa ttgataattt
    2351  agatatgata agaggtgctt attgacgtga tcctcagaaa gaaacagaaa
    2401  tgcttcaata ctgatagata gcaataaccc aattaattgg gcattttagt
    2451  ttactgaaaa gtaaaccaaa atgg