Sequence of DPV Beet virus Q
Beet virus Q genomic RNA 1
ACC No: AJ223596
Dated: 2006-11-30 | Length: 6003 | CRC: 269700416
ID AJ223596; SV 1; linear; mRNA; STD; VRL; 6003 BP.
XX
AC AJ223596;
XX
DT 04-SEP-1998 (Rel. 56, Created)
DT 30-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE Beet virus Q genomic RNA 1
XX
KW .
XX
OS Beet virus Q
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN [1]
RP 1-6003
RA Koenig R., Pleij C., Beier C., Commandeur U.;
RT "Genome properties of beet virus Q, a new furo-like virus from sugarbeet,
RT determined from unpurified virus";
RL J. Gen. Virol. 79:2027-2036(1998).
XX
RN [2]
RP 1-6003
RA Koenig R.;
RT ;
RL Submitted (21-JAN-1998) to the EMBL/GenBank/DDBJ databases.
RL Koenig R., Biologische Bundesanstalt fuer Land- und Forstwirtschaft,
RL Messeweg 11, Braunschweig, Germany.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6003
FT /organism="Beet virus Q"
FT /specific_host="Beta vulgaris"
FT /mol_type="mRNA"
FT /db_xref="taxon:71972"
FT 5'UTR 1. .120
FT CDS 121. .4053
FT /product="unknown"
FT /db_xref="GOA:Q9WKC2"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR002588"
FT /db_xref="InterPro:IPR013664"
FT /db_xref="UniProtKB/TrEMBL:Q9WKC2"
FT /protein_id="CAA11456.1"
FT /translation="MDSILGKLQSQELVDAVLHTSATRTQSELHQTMCNHYGNQIKDAT
FT EKLKNKKKIDVKRNLTEDQLQLLCDLFPERRIVSSSVHRGTHSMAAAMRKIETDLVLSS
FT FPSEVIYDVGGNWATHAMRSDKRFVHCCCPILDFRDAQRKMTRMINYTKFIESSKELDP
FT ATAERAERIRDDTKRIKDQVDAGLLSHHDLNGKWYCQNRFEDCVFEPFSDDTLKKDALV
FT CGMAIHSIYDIHLVDLVAAMQRKGIRVLTGTFLFAVDMLLGKKEGELPTVNGFYRVNGN
FT KVKYGFYDDPNCGYEHDLDSLLLYITKTFVKSPDGAVYYLELNDLRGDVMFFTLTEATE
FT ARAMGVRNDSSFKCLPVVGRGKVVFPIFDLDSKSGELVFKEEILPRDYVSRSLEYVGRM
FT KENQLNVETIFGYLASTNNAVIIGGSARKTVEKVDPRLLPMIATTLLVYTEVQRQRQKL
FT VLHKLRMRVSEELQFMEIVRCVLHGVFGKKSVYQKGLQVFAKWLNFANGGKILNILDVP
FT AFVEVNDRIKLWAEHVKSNGLIFTFSDIEEKARLYEECERDQLISQKLVVDKHGLFCDS
FT DEAGKNRYAGEPGCIEKQTGKSTFEDWMAGTGHFSSEQKEIYRGTTNGDVKDKVPQWSM
FT KYVESWLECEDHFHSSSCEVKDAFVIPLVKELFNMIRSELLLEHIHFIDDRRDTSEGAQ
FT GAESLKKDSITEAAQGCSDIENDDDQETGDHMSDEADEVSNEGIPRNSSEELMDQGYEC
FT DNEATPAVIDVVPIIVATSRELKGKGLLECEDIDYESDTVMETGECSRPLEYITDDSDD
FT SDNGGGVCEIIPGRWAEMADDSDVAVTMKEASPPVDPMIVCYSRLPTRPDETESDDFRT
FT LAKKEFLWYLRCKMIADKSTMLDAIRDFLYGKFHDGKCKTPKDACFLDYSENHCGEWLF
FT NKSPKRLGHAYAVKLVDRTWKKCKLVPLCWEKDENGNFVTNKPKFSHDERGLYMMCELT
FT FLMNEMVILEKLEKVFLKRKQKRVPRVTLIDGVPGCGKSTHIVKEANLVDHYVLTMGKE
FT ASLDLKERFMRERGATESDVKRVRTVDSFIMNDRFSRANVLHFDEALMAHAGTVYFCAD
FT MLSARTVICQGDSQQIPFVPRVEGITLKYAKLKIDNVVEKRLTYRSPLDVAAFLTRKGY
FT YGNSVIMSANETLRSMKTIGPRTGMTSIYSIPKVANCQYLTFTQAEKEEMEKYLGKGKW
FT GVNTVHECQGKTYENVVLVRLKSTANEIYPGGENSKPYVVVGTTRHRRSVIYYTMAEDS
FT LFHDISLMMSVQEGKLMKHLFSESVQ"
FT CDS 121. .5577
FT /transl_except=(pos:4051. .4053,aa:OTHER)
FT /product="unknown"
FT /note="readthrough protein, translation of uaa not given"
FT /db_xref="GOA:O90699"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR001788"
FT /db_xref="InterPro:IPR002588"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR013664"
FT /db_xref="UniProtKB/TrEMBL:O90699"
FT /protein_id="CAA11457.1"
FT /translation="MDSILGKLQSQELVDAVLHTSATRTQSELHQTMCNHYGNQIKDAT
FT EKLKNKKKIDVKRNLTEDQLQLLCDLFPERRIVSSSVHRGTHSMAAAMRKIETDLVLSS
FT FPSEVIYDVGGNWATHAMRSDKRFVHCCCPILDFRDAQRKMTRMINYTKFIESSKELDP
FT ATAERAERIRDDTKRIKDQVDAGLLSHHDLNGKWYCQNRFEDCVFEPFSDDTLKKDALV
FT CGMAIHSIYDIHLVDLVAAMQRKGIRVLTGTFLFAVDMLLGKKEGELPTVNGFYRVNGN
FT KVKYGFYDDPNCGYEHDLDSLLLYITKTFVKSPDGAVYYLELNDLRGDVMFFTLTEATE
FT ARAMGVRNDSSFKCLPVVGRGKVVFPIFDLDSKSGELVFKEEILPRDYVSRSLEYVGRM
FT KENQLNVETIFGYLASTNNAVIIGGSARKTVEKVDPRLLPMIATTLLVYTEVQRQRQKL
FT VLHKLRMRVSEELQFMEIVRCVLHGVFGKKSVYQKGLQVFAKWLNFANGGKILNILDVP
FT AFVEVNDRIKLWAEHVKSNGLIFTFSDIEEKARLYEECERDQLISQKLVVDKHGLFCDS
FT DEAGKNRYAGEPGCIEKQTGKSTFEDWMAGTGHFSSEQKEIYRGTTNGDVKDKVPQWSM
FT KYVESWLECEDHFHSSSCEVKDAFVIPLVKELFNMIRSELLLEHIHFIDDRRDTSEGAQ
FT GAESLKKDSITEAAQGCSDIENDDDQETGDHMSDEADEVSNEGIPRNSSEELMDQGYEC
FT DNEATPAVIDVVPIIVATSRELKGKGLLECEDIDYESDTVMETGECSRPLEYITDDSDD
FT SDNGGGVCEIIPGRWAEMADDSDVAVTMKEASPPVDPMIVCYSRLPTRPDETESDDFRT
FT LAKKEFLWYLRCKMIADKSTMLDAIRDFLYGKFHDGKCKTPKDACFLDYSENHCGEWLF
FT NKSPKRLGHAYAVKLVDRTWKKCKLVPLCWEKDENGNFVTNKPKFSHDERGLYMMCELT
FT FLMNEMVILEKLEKVFLKRKQKRVPRVTLIDGVPGCGKSTHIVKEANLVDHYVLTMGKE
FT ASLDLKERFMRERGATESDVKRVRTVDSFIMNDRFSRANVLHFDEALMAHAGTVYFCAD
FT MLSARTVICQGDSQQIPFVPRVEGITLKYAKLKIDNVVEKRLTYRSPLDVAAFLTRKGY
FT YGNSVIMSANETLRSMKTIGPRTGMTSIYSIPKVANCQYLTFTQAEKEEMEKYLGKGKW
FT GVNTVHECQGKTYENVVLVRLKSTANEIYPGGENSKPYVVVGTTRHRRSVIYYTMAEDS
FT LFHDISLMMSVQEGKLMKHLFSESVQXRFGSKYEEFVFSDIATKVPDVGEAQALQEMYD
FT IAFPGNSTIDTCFDGYEVATGGIHVEIDDLTYYPNKQTKVWSEVKGLTPVLRTAMPEKR
FT QGGLVESPLALNKRNMAAPQLQESVNEFEIIEKTVTRARDIFFDVDRIDASVMNTVENA
FT ARWWGKQSFTAQKQMIADTRVVHEIDVCTYNFMIKNDVKPKLDLSPQSEYAALQTVVLP
FT DKIVNALFGPIMKKINERIRFALKPHVIYNTRMTASELDAAVEFLDVREEFESVEIDFS
FT KFDKSKTSLHIRAVLELYRMFGLDDLCAYLWEKSQCQTIVKDRVNGLVAHLLYQQKSGN
FT CDTYGSNTWSAALSLIESLPLEKARFMIFGGDDSLIFFPKRMAIPDPCRRLAAVWNFDC
FT KMFNFENNAFCGKFLIKVGERYRFAPDPYKLLTKLGRKDIKDGKLLSEIFTSVCDNYRY
FT YSDYRVLEALNVAIIERYRLSCDVMFGLCALKKHIGSFSLFSSLFNYNGKYQKCYVDRN
FT FDW"
FT 3'UTR 5575. .6003
XX
SQ Sequence 6003 BP; 1796 A; 934 C; 1453 G; 1820 T; 0 other;
aj223596 Length: 6003 30-NOV-2006 Type: N Check: 4320 ..
1 ataattttta ttctaacagg ttttatccta gcagaataat ttttgtcggc
51 aattggagga gcccgttttt gaaacgataa atcttctcta tatttccggc
101 gttttcttca cttttgaagc atggattcta ttttaggaaa attgcagtca
151 caagagttgg tagatgccgt tttacatact agtgctacga gaacacagtc
201 tgaattgcac cagactatgt gtaatcatta tggtaatcag atcaaagatg
251 ctacagaaaa gttaaaaaac aaaaaaaaaa tagatgtaaa aaggaacttg
301 accgaggatc agttgcaatt actttgcgac ttatttccag agagacgtat
351 agtttcttct tctgttcacc gagggactca cagtatggca gcggccatga
401 ggaagattga aacagactta gtgttatctt cttttcctag cgaagttatt
451 tatgacgttg gaggtaattg ggcaacacac gctatgagaa gtgataagcg
501 tttcgtacat tgctgttgtc cgattttaga cttccgtgat gcgcaacgta
551 agatgacacg tatgataaat tacactaagt ttattgaaag ttccaaggag
601 ttggaccctg ctacggctga gcgagcggaa cgtattcgag acgatacgaa
651 aagaattaaa gatcaagtgg acgctggttt attgagtcac cacgacttga
701 acggcaaatg gtattgtcaa aacagatttg aagactgtgt tttcgaaccg
751 ttttctgacg atacgttaaa gaaagatgcg cttgtttgcg gcatggctat
801 tcatagtatc tatgatatcc acttagtgga tttggtagct gcgatgcaaa
851 ggaagggtat tagagtctta actggaacgt ttttatttgc agtggatatg
901 ttgcttggaa aaaaagaagg cgagttacct accgtcaatg gtttttacag
951 ggttaatggt aataaggtaa aatatggttt ttacgatgat cctaattgtg
1001 gttatgaaca tgatttggat tctttgttat tgtatattac gaagaccttc
1051 gtaaaatccc ctgacggagc tgtatattac ctcgaattga atgatttaag
1101 gggtgatgtg atgtttttta cgctgactga agcaacggaa gccagggcta
1151 tgggcgttag aaacgactct tctttcaaat gtctgccagt ggtgggaaga
1201 ggtaaagttg tgtttcctat ttttgatttg gattctaagt cgggtgagtt
1251 ggtgttcaaa gaggagattc ttccacgtga ttatgtgagc agatcattgg
1301 aatatgttgg taggatgaaa gagaatcaat taaatgtgga aacgattttt
1351 ggttatcttg catccactaa taatgcggtg attattgggg gttctgcgcg
1401 aaaaacggtt gaaaaggttg atcctagact tttgccaatg atagctacaa
1451 cattgttagt atatactgag gtacagagac aaaggcaaaa gttagtgttg
1501 cacaagttgc ggatgagagt cagtgaggaa ctacaattta tggagattgt
1551 gcgctgtgtg cttcatggcg tatttggcaa gaaaagtgtg taccagaaag
1601 ggttgcaagt ttttgccaag tggttgaatt tcgcgaatgg gggaaaaata
1651 ttgaatatat tagacgtccc tgcgttcgtt gaagtaaacg atcggattaa
1701 gttgtgggcg gagcacgtaa aaagtaatgg gcttatcttc actttctcag
1751 atattgagga gaaggctagg ttgtatgagg agtgtgagcg tgaccaatta
1801 atttctcaaa aattagtggt cgataaacac ggtttgtttt gtgatagtga
1851 cgaagccggt aagaacagat acgccggaga acctgggtgt attgagaaac
1901 agacgggaaa atcaactttt gaggattgga tggcaggaac gggtcatttc
1951 agtagtgagc aaaaggagat ttatcgtgga actactaatg gtgacgtaaa
2001 agacaaagtt cctcaatgga gtatgaagta cgtcgaaagt tggttggaat
2051 gtgaagatca ctttcattcc tcgtcttgtg aagtgaaaga tgcttttgtg
2101 atacctcttg tgaaagaatt atttaatatg ataaggagtg aattattgtt
2151 agagcacata cattttattg atgatcgcag agatacttct gagggtgcac
2201 aaggcgccga gagcttgaaa aaagactcta tcactgaggc cgcacagggt
2251 tgtagtgata ttgagaatga tgacgatcag gagactggtg atcatatgag
2301 tgatgaagct gatgaagtgt ctaacgaggg tatacctagg aattcctccg
2351 aggaattaat ggaccaaggt tacgagtgtg ataatgaggc taccccggct
2401 gtaattgacg ttgtaccaat tatagtggca acaagcagag agttgaaagg
2451 aaaaggactg ctagaatgtg aagatattga ctacgaaagc gacaccgtta
2501 tggaaacagg agagtgttcg cgaccgctgg agtatatcac cgatgactca
2551 gacgatagtg ataacggtgg tggagtatgt gaaataatac cgggaagatg
2601 ggcagagatg gccgatgatt ctgacgtcgc cgtgacgatg aaagaagcga
2651 gcccccccgt ggaccccatg atagtgtgtt attcaaggtt acctaccaga
2701 cctgatgaaa ctgaatctga cgattttagg acgcttgcta agaaagagtt
2751 cttgtggtat ttgcgatgca aaatgatagc agacaagtct acgatgttgg
2801 atgctatccg agattttcta tatggaaaat ttcatgatgg gaaatgtaaa
2851 accccaaagg atgcgtgttt tttagactat tctgagaatc actgcggtga
2901 gtggttattt aataaatcgc ctaagcgatt aggtcacgct tatgcagtta
2951 aacttgttga tcgtacttgg aagaagtgca agcttgtacc gttgtgctgg
3001 gaaaaggatg agaacggtaa ctttgttaca aataagccaa aattttcaca
3051 tgacgagaga gggctttaca tgatgtgtga gctgacgttt ttgatgaacg
3101 aaatggttat tctagagaag cttgagaaag tttttctgaa aagaaaacaa
3151 aaacgtgtac cgcgggtcac gctaattgat ggtgtgccag gttgtggtaa
3201 atccactcat atagttaagg aggctaatct tgttgatcat tatgtcttaa
3251 ctatggggaa agaagcctca ttggacctta aggaaagatt tatgcgcgag
3301 cgaggtgcga cagagagcga tgtgaaaagg gttagaacag tcgattcatt
3351 cattatgaat gatcgttttt ctagagcaaa cgtacttcat ttcgatgaag
3401 cgctaatggc tcatgcagga actgtttatt tttgcgctga tatgttgtcc
3451 gccaggactg ttatatgtca aggagattct caacagattc ctttcgttcc
3501 gcgagttgag ggaattactc taaaatatgc taaattgaaa atagataatg
3551 tcgtggaaaa gagattgact tataggtcac cattggatgt tgccgcattt
3601 ttaactcgaa agggttatta cggtaactcg gtgattatga gtgctaatga
3651 gactttgaga tctatgaaaa ctatcggtcc caggacaggt atgacttcca
3701 tctattctat tccaaaagtt gccaattgtc aatatttgac ctttacgcaa
3751 gctgaaaaag aagagatgga gaaatacttg ggcaaaggaa aatggggtgt
3801 gaatacagta cacgaatgtc aaggaaaaac ttatgagaac gttgtactcg
3851 taagattgaa aagcactgca aacgaaattt atccaggtgg tgagaactca
3901 aagccttatg tagttgtggg gactacacgg caccgaagaa gtgtaattta
3951 ttacactatg gccgaagata gtctttttca tgacatttca ctaatgatga
4001 gtgtgcaaga aggtaaatta atgaagcatt tgttttcgga atctgttcaa
4051 taacggtttg ggtcaaagta cgaagaattc gtattttcgg atattgctac
4101 aaaagtacct gatgtaggtg aagctcaagc tttacaagaa atgtatgata
4151 tagcgtttcc gggaaattct acgattgaca cgtgctttga cgggtatgaa
4201 gttgctacag gtggtataca tgttgaaatt gatgatttga catactaccc
4251 taataaacaa acaaaggttt ggagcgaggt gaaaggttta actccagtat
4301 tacgaactgc tatgcctgag aaaagacaag ggggtctagt ggaaagtcca
4351 ctcgctttaa ataaaaggaa tatggctgca ccacaactgc aggagtctgt
4401 taacgagttt gagatcatag aaaagactgt gaccagggct agagatattt
4451 tttttgatgt tgatcgaatt gatgcctctg tcatgaacac tgttgagaat
4501 gccgcgcggt ggtggggcaa acaatctttt actgctcaaa aacagatgat
4551 tgcggatact cgtgtagtcc atgaaattga tgtgtgcact tataatttta
4601 tgattaaaaa tgacgttaaa cctaaactag atctgtcgcc gcaatcagaa
4651 tacgctgcct tacaaactgt cgttttacct gataagattg taaacgctct
4701 atttggacct attatgaaaa aaattaatga gcgcattcgg tttgctttga
4751 aaccgcatgt aatatataat actcgcatga ccgcctctga gcttgacgca
4801 gccgttgagt ttttagacgt tagggaagaa tttgagtctg tggagattga
4851 tttttcgaaa tttgataagt caaaaacatc actacacatt cgtgcggtgt
4901 tggagttata tcgtatgttt ggcttagacg atttatgtgc gtacctgtgg
4951 gagaaatctc agtgtcaaac tattgttaag gatagggtga atggattagt
5001 tgctcatctt ttgtatcagc agaaatcggg taattgtgac acctatggtt
5051 ccaatacttg gtctgccgcc ttatctttaa ttgaatccct tccattggaa
5101 aaagccagat ttatgatctt tggaggcgat gattctctaa tattctttcc
5151 aaaacgtatg gctataccag atccttgtcg aaggttggct gctgtgtgga
5201 actttgactg taaaatgttc aactttgaga ataacgcatt ttgcgggaaa
5251 tttctgatca aggttggtga aagatataga tttgcgcccg acccttataa
5301 actgctcaca aaattgggta gaaaagacat caaagatggt aaattattga
5351 gtgagatttt tacctctgtt tgtgataatt acagatatta tagtgattat
5401 cgcgtactag aggcactaaa tgttgccata atcgagcgtt atagattgtc
5451 ttgtgatgtt atgttcggtc tgtgtgcttt gaaaaagcat ataggttcct
5501 tttctttatt ttcatcgttg tttaattata acggaaaata ccaaaaatgt
5551 tacgttgata ggaacttcga ttggtaatca ttattacctg ccgtctttac
5601 ggtttcgttg tattccattg ttgtgataat gttgaatcac gtttcattac
5651 cttttggtag ttataattga taattacgaa tttgttatta atactagttg
5701 atttttctag catctttgtc gtgttgatct agtatgtgtg caacgtgaga
5751 tgtgtcgtta acatctagtg ctttaaagtt cacttaaatc gaacttttct
5801 tattgtggtg catacaataa tgcatagtgt ttgccgttcc acttaaatcg
5851 aaacggatat ttctggtctc tagacgctgg tagttcaata aataaaaaac
5901 tatcatttgt cgttacagag atgcgacgag ttgtcgccgc ttataagaca
5951 cataggcgct gtggggtgca aatccccccc taacttgagg gaaatcaagc
6001 ccc