Sequence of DPV Potato mop-top virus

Potato mop-top virus mRNA for coat protein/readthrough domain, strain S, partial

ACC No: AJ224991

Dated: 1998-11-11 | Length: 2046 | CRC: 1273092800

                !!NA_SEQUENCE 1.0
ID   PMV224991  standard; RNA; VRL; 2046 BP.
XX
AC   AJ224991;
XX
SV   AJ224991.1
XX
DT   17-SEP-1998 (Rel. 57, Created)
DT   11-NOV-1998 (Rel. 57, Last updated, Version 3)
XX
DE   Potato mop-top virus mRNA for coat protein/readthrough domain, strain S,
DE   partial
XX
KW   coat protein; cp gene; readthrough domain.
XX
OS   Potato mop-top virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN   [1]
RP   1-2046
RA   Reavy B.;
RT   ;
RL   Submitted (10-MAR-1998) to the EMBL/GenBank/DDBJ databases.
RL   Reavy B., Virology, Scottish Crop Research Institute, Invergowrie, Dundee,
RL   DD2 5DA, UK.
XX
RN   [2]
RA   Reavy B., Arif M., Cowan G.H., Torrance L.;
RT   "Association of sequences in the coat protein/readthrough domain of potato
RT   mop-top virus with transmission by Spongospora subterranea";
RL   J. Gen. Virol. 79:2343-2347(1998).
XX
DR   SPTREMBL; O91258; O91258.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2046
FT                   /db_xref="taxon:37128"
FT                   /virion
FT                   /organism="Potato mop-top virus"
FT                   /lab_host="Nicotiana debnyii"
FT                   /isolate="S"
FT   CDS             <1. .1824
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O91258"
FT                   /evidence=EXPERIMENTAL
FT                   /gene="cp"
FT                   /product="coat protein, readthrough domain"
FT                   /function="vector transmission"
FT                   /protein_id="CAA12277.1"
FT                   /translation="QLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHVDGLVSIN
FT                   YAQLDRALSVVGGNILPQTLEITRDERKRQLHEVRVIDGERVTIRNKDEATVIRNHGQG
FT                   LPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDWLCSRLRA
FT                   RGALNVSRMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAEQNSFVEA
FT                   VRAKDEGDRELAEARLTNVRRNLRRHLNYRPEYFDIIEAKAVYLVTVLTNAMSGPVVGV
FT                   DDDERTAVVAAFNPSDCGLPNLDSCSLDEIKNFGLSEVAIGEGTNVEQARGYLNLCRNV
FT                   QCMIETIGTVQFLGVLSSYTGPQYPCISQAFAEDKRIRKERLKDKDNITTADIIAYLVS
FT                   GVMAAYALVAVSKGGITLFKFMKNYAGGGGDGPGSSRRIRQLEAALPSVPQPEELTMME
FT                   RLRRLQSSDNDLVLRRNPSDMLSQVVRDVVADVDSSDIAEFLNDPARMTEAALELRLTR
FT                   IMSAEGSPVDVIEPGGQELISMQVHGESLTVINAGTDSPTVIRSASLSTRHRSSGIEIG
FT                   SFAVDKVLPYEVEGENNDHIRSLSIYREDVR"
XX
SQ   Sequence 2046 BP; 534 A; 381 C; 581 G; 550 T; 0 other;

AJ224991  Length: 2046  December 21, 2001 15:37  Type: N  Check: 1126  ..

       1  caattaaccg ctcaggcttt ttggtttgac gtcaacgccg ctatcgacga
      51  aattgataat cgactgctgg cggcggctgc gttaagacta ttgcctgggc
     101  aggcaaatca cgtggatggt ttagtgtcta taaattacgc acaattggat
     151  agagcattga gtgttgttgg tgggaatatt ttacctcaga cgttggagat
     201  aactcgtgac gaaagaaaaa ggcaattaca tgaggtcaga gttatcgacg
     251  gcgagcgtgt cactattcgt aacaaggatg aggcgacggt cattaggaat
     301  catggtcagg gacttccttg gctattagcg tttttactgt tgctgttatc
     351  tgttgtagtg gtgtattcta caatatacct gaacgactgg ttgtatcggt
     401  taagtgtggt aaggcatggg aaacctggcg gtggtgcagc tcgtaagctg
     451  tcggggatgt cggactggtt gtgcagtcgc ttaagggcca gaggcgcttt
     501  gaatgtgagt aggatgagga agaagcaagc atgcgatccg tcgcccactg
     551  ggttgcggaa gttccttact tgttataact tttcttatga actttgggac
     601  cctactggta gttatgacga tgcgcagcgg agaattatag cggaacagaa
     651  ttcgtttgtg gaagccgtga gggccaaaga tgaaggtgac agggaattgg
     701  ctgaggcgcg tttgactaat gttagacgga acctcaggag acatcttaat
     751  taccgacctg aatattttga tattattgaa gcgaaggcgg tatatttggt
     801  gacagtgctt acaaacgcaa tgtcggggcc agttgttggc gttgacgatg
     851  acgagcggac agcggtggta gccgcgttta atccgtcaga ctgtgggtta
     901  ccgaatttgg atagttgctc tttggacgaa attaagaatt ttggtttgtc
     951  cgaagtggcg atcggtgagg gtaccaatgt tgaacaagca agagggtatc
    1001  ttaatctttg tagaaatgtt cagtgtatga ttgagacaat tggcaccgtc
    1051  caatttcttg gtgtgttgtc gtcgtataca ggtcctcagt atccttgtat
    1101  atcccaagct tttgctgaag ataagaggat aagaaaagaa aggctgaaag
    1151  ataaggacaa tataacgaca gcagatatta ttgcctattt ggtgagtggg
    1201  gtgatggcag cctacgccct tgtggcggta agtaaaggag ggatcacact
    1251  gtttaagttt atgaagaact atgcgggtgg aggtggtgac gggcctggtt
    1301  caagcagaag aataagacag ttagaggccg ctttgccctc cgttccgcag
    1351  ccagaagaac tgaccatgat ggaacgtttg agaagacttc aatcttccga
    1401  taacgattta gttttgagaa ggaacccgtc cgatatgctt agtcaggtcg
    1451  tacgtgacgt tgtagccgat gtagactcca gcgatattgc tgagtttttg
    1501  aatgatcctg ctaggatgac cgaagcggct ctggagctcc gattgaccag
    1551  aataatgagt gctgaaggtt caccggtgga tgtaattgag ccagggggcc
    1601  aggaacttat ttccatgcaa gtgcatggag aaagtctaac cgtcataaat
    1651  gccggcaccg actctcccac agtgatcaga tccgcgtcct tgtcgacgcg
    1701  gcaccgtagt tctggtatag aaatcggttc ttttgcagtg gataaagtgc
    1751  tgccttacga ggtggaaggc gaaaacaacg atcatattag gtcgctctcg
    1801  atctataggg aagatgtcag gtaagatggc tgtttaaacc gagtgcgtgt
    1851  gacgggtcta cctctctaaa agtcacaccg tggatactac gacaagtatc
    1901  agtgcttaca ggacttatgt ctgtggttca cttaaatcga accattggag
    1951  caatccaacg ttaatactac gttaagtatt agtgcttaca gggctaaacc
    2001  gtggttcact ttaatcgaac cagtctcgaa agggacgagg taccgc