Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, isolate Ni2 genomic RNA

ACC No: AJ279933

Dated: 2000-09-30 | Length: 720 | CRC: -1844359119

                !!NA_SEQUENCE 1.0
ID   RYE279933  standard; RNA; VRL; 720 BP.
XX
AC   AJ279933;
XX
SV   AJ279933.1
XX
DT   30-SEP-2000 (Rel. 65, Created)
DT   30-SEP-2000 (Rel. 65, Last updated, Version 1)
XX
DE   Rice yellow mottle virus CP gene for coat protein, isolate Ni2 genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (20-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., LPRC, CIRAD/IRD, BP 5045, 34032 Montpellier cedex 1, FRANCE.
XX
RN   [3]
RA   Pinel A., N'Guessan P., Bousalem M., Fargette D.;
RT   "Molecular variability of geographically distinct isolates of Rice yellow
RT   mottle virus in Africa";
RL   Arch. Virol. 145:1621-1638(2000).
XX
DR   SPTREMBL; Q9DUP6; Q9DUP6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Nigeria"
FT                   /db_xref="taxon:31744"
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ni2"
FT   CDS             1. .720
FT                   /db_xref="SPTREMBL:Q9DUP6"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAC10437.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   MVPGPLSSNTWPLHSVEFLADFKRSSTSADATTYNCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSATVAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTILPARLAVRSSIKPAVGDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 201 C; 212 G; 150 T; 0 other;

AJ279933  Length: 720  December 21, 2001 15:39  Type: N  Check: 3605  ..

       1  atggccagga agggcaagaa aaccaactcc aaccaggggc agcaaggaaa
      51  gaagaagagc cgacgcccac gtgggcgttc ggcggaaccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggatggt tcctggtcca
     151  ctatcttcta acacctggcc gctccactcc gttgagttcc ttgcggactt
     201  caagcggagt tccacatcgg cggacgcgac gacatacaac tgtgtgccgt
     251  tcaatctgcc tcgggtgtgg agtcttgcac gttgttactc gatgtggaag
     301  ccaacacggt gggatgtcgt ctacctccca gaggttagcg cgacagttgc
     351  tgggagtatc gagatgtgtt ttctctacga ctacgctgac acaatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccatttgtta agtggcggct cagcacggaa
     501  tgccgtggtc gcctcgatgg actgttcccg agtcggctgg aaacgcgtta
     551  ctagttccat acctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg atcgtcgatc aaaccggcgg ttggcgatac
     651  accggggaaa ctctacgcta tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga