Sequence of DPV Carnation mottle virus
Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate sp-l
ACC No: AJ309508
Dated: 2005-04-15 | Length: 1382 | CRC: -1418766759
!!NA_SEQUENCE 1.0 ID CMO309508 standard; genomic RNA; VRL; 1382 BP. XX AC AJ309508; XX SV AJ309508.1 XX DT 30-JAN-2001 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate DE sp-l XX KW coat protein; cp gene; movement protein; p7 gene; P9 gene. XX OS Carnation mottle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-1382 RA Pallas V.; RT ; RL Submitted (29-JAN-2001) to the EMBL/GenBank/DDBJ databases. RL Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular RL de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN. XX RN [4] RX DOI; 10.1007/s007050170051. RX MEDLINE; 21578632. RX PUBMED; 11722023. RA Canizares M.C., Marcos J.F., Pallas V.; RT "Molecular varaibility of twenty-one geographically distinct isolates of RT Carnation mottle virus (CarMV) and phylogenetic relationships within the RT Tombusviridae family"; RL Arch. Virol. 146(10):2039-2051(2001). XX FH Key Location/Qualifiers FH FT source 1. .1382 FT /country="Spain" FT /db_xref="taxon:11986" FT /mol_type="genomic RNA" FT /organism="Carnation mottle virus" FT /isolate="sp-l" FT /variety="Lord" FT CDS 1. .186 FT /db_xref="GOA:Q98VN0" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProt/TrEMBL:Q98VN0" FT /note="The central region contains an RNA-binding motif" FT /gene="p7" FT /product="movement protein" FT /protein_id="CAC27501.1" FT /translation="MDIEPEVSVVGKQTLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN FT WVNVADKIEVHIHFNF" FT CDS 92. .346 FT /db_xref="UniProt/TrEMBL:Q98VK4" FT /gene="p9" FT /product="movement protein" FT /protein_id="CAC27502.1" FT /translation="MPSANLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL FT SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK" FT CDS 336. .1382 FT /db_xref="GOA:Q999Z5" FT /db_xref="HSSP:2TBV" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProt/TrEMBL:Q999Z5" FT /gene="cp" FT /product="coat protein" FT /protein_id="CAC27503.1" FT /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNHKRRAE FT MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF FT EDWVVSPRNVSVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP FT PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD FT KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK FT WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICELVTQMEGQILKITKTSAEQP FT LQWVVYRM" XX SQ Sequence 1382 BP; 403 A; 316 C; 355 G; 308 T; 0 other; AJ309508 Length: 1382 April 19, 2005 08:56 Type: N Check: 3924 .. 1 atggatattg aaccggaagt atcagtagtt ggaaagcaaa cgctcgctgg 51 gaatagagga aaacagaaga cacgtagatc ggtggccaag gatgccatcc 101 gcaaacctgc atctgatagt actaacgggg gtaattgggt taatgttgct 151 gataagattg aggtgcacat tcacttcaac ttttagtttg cccccactgg 201 taactttaaa tcagataata gcgttgtcat tttgtggtct tctattaaac 251 agcatctctc gggcagaaag agcttgctat tacaactact ctgttgatag 301 ttctaaacaa caacacattt cgataagtac accaaatgga aaataaagga 351 gaaaagatcg cgatgaatcc cactgtgcaa acgttggcgc agaaggggga 401 caagttagcc gtaaagttgg tgacaagagg gtgggcctct ctgagtacga 451 accataagag gagagctgaa atgcttgctg gatacactcc agcgatccta 501 gccttcacac cccgacgacc acggatgacg aaccctcctc caagaaccag 551 taggaattca ccaggacaag ctggaaagtc catgacgatg agtaagaccg 601 aactactaag caccgtcaaa ggtaccacag gtgttatccc aagctttgaa 651 gactgggtcg tttccccccg aaacgtatcc gtcttccctc aactctcgct 701 gctggcgacg aacttcaaca agtaccgcat tactgcgctc actgtgaagt 751 actcacccgc gtgcagcttc gagaccaatg ggagggtggc tctgggattc 801 aacgatgacg cttcggacac accaccaacc accaaggttg ggttttacga 851 tctgggcaaa catgtggaaa ctgctgcaca gacagctaag gatctagtga 901 taccagtaga cggcaaaacc cggttcatca gggattcggc tagtgatgat 951 gccaaactag tcgattttgg gcgaatagtc ttgtcaacat acgggtttga 1001 caaggctgac actgtggtgg gcgaattgtt tatacagtac acgatcgtgc 1051 tgagtgaccc aaccaagacg gccaaaattt cacaggcaag caacgataag 1101 gtgtcggacg gaccaacgta tgtggtccct tcggttaatg gcaacgagct 1151 acaactaaga gtggtagccg ctgggaagtg gtgcattata gtgcggggta 1201 cggttgaggg tggcttcacc aaacccacac ttattgggcc cggaatcagc 1251 ggtgatgtgg actatgaaag tgccagacct atcgccattt gtgaattggt 1301 gacacaaatg gagggccaga tattgaaaat caccaagacc tcagcagaac 1351 aaccactcca atgggttgtt tataggatgt ga