Sequence of DPV Wheat dwarf virus
Wheat dwarf virus - [Enkoping1] complete genome, isolate Enkoping1
ACC No: AJ311031
Dated: 2006-11-14 | Length: 2750 | CRC: -570082596
ID AJ311031; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC AJ311031; XX DT 19-DEC-2001 (Rel. 70, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Wheat dwarf virus - [Enkoping1] complete genome, isolate Enkoping1 XX KW coat protein; movement protein; rep gene; repA gene; KW replication-associated protein; Replication-associated protein A; V1 gene; KW V2 gene. XX OS Wheat dwarf virus - [Enkoping1] OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2750 RA Kvarnheden A.; RT ; RL Submitted (17-APR-2001) to the EMBL/GenBank/DDBJ databases. RL Kvarnheden A., Dept. of Plant Biology, Swedish University of Agricultural RL Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN. XX RN [2] RX DOI; 10.1007/s705-002-8313-x. RX PUBMED; 11858231. RA Kvarnheden A., Lindblad M., Lindsten K., Valkonen J.P.T.; RT "Genetic diversity of Wheat dwarf virus"; RL Arch. Virol. 147(1):205-216(2002). XX FH Key Location/Qualifiers FH FT source 1. .2750 FT /organism="Wheat dwarf virus - [Enkoping1]" FT /specific_host="Triticum aestivum" FT /strain="Wheat" FT /isolate="Enkoping1" FT /mol_type="genomic DNA" FT /country="Sweden" FT /virion FT /db_xref="taxon:290587" FT misc_feature 1. .170 FT /note="long intergenic region" FT CDS 171. .443 FT /gene="v1" FT /product="Movement protein" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:Q8UYL2" FT /protein_id="CAC84658.1" FT /translation="MEQAIAPPLPIRDYQYQTPSNPGSSDYAWRTFVFVTFGLLIAVGV FT AWLAYTLFLKDLILVCKAKKQRRTEEIGYGNTPARLNGDQQGLPR" FT CDS 415. .1197 FT /gene="v2" FT /product="Coat protein" FT /db_xref="GOA:Q8UYL1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:Q8UYL1" FT /protein_id="CAC84659.1" FT /translation="MVTNKDSRGKGKRKLEEGESSGRWKGAVYKRRKQTYKVVPVKPPA FT LCVFRYNWLNSDRTNIVVGNTPRVDLITCFAQGKADNNRHTNQTVLYKFNIQGTCYMSD FT ASAPFIGPVRLYHWLVYDAEPKQAMPDATDIFTMPWNLLPSTWTVQRAWSHRFVVKRKW FT TVNLVTDGRKVGSKTVDQRYNWVVGKNIVDANKFFKGLRVTTEWMNTGDGKIGDIKKGA FT LYLISSTRGGVTGDSASTAFDVVCAYTHACYFKAIGIQ" FT misc_feature 1198. .1369 FT /note="Short intergenic region" FT mRNA join(complement(1882. .2511),complement(1370. .1795)) FT /gene="rep" FT CDS join(complement(1882. .2511),complement(1370. .1795)) FT /gene="rep" FT /product="Replication-associated protein" FT /db_xref="GOA:Q8UYL0" FT /db_xref="HSSP:P27260" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProtKB/TrEMBL:Q8UYL0" FT /protein_id="CAC84660.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR FT DYITKEVDSDANTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCNRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSESPGRHKSIYIC FT GPTRTGKTSWARSLGTHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF FT TVNPKYGKRKVIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVVHYMYEGESFINYS FT FASGEDVTASQ" FT exon complement(1370. .1795) FT /gene="rep" FT /number=2 FT CDS complement(1717. .2511) FT /gene="repA" FT /product="Replication-associated protein A" FT /db_xref="GOA:Q8UYK9" FT /db_xref="HSSP:P27260" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProtKB/TrEMBL:Q8UYK9" FT /protein_id="CAC84661.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR FT DYITKEVDSDANTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCNRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSVSLESYIICTST FT PADQAQSDLEWMDDYSRSHRGGISPSTSAGQPEQERLPGQGL" FT intron complement(1796. .1881) FT /gene="rep" FT /number=1 FT exon complement(1882. .2511) FT /gene="rep" FT /number=1 FT misc_feature 2512. .2750 FT /note="Long intergenic region" XX SQ Sequence 2750 BP; 712 A; 596 C; 733 G; 709 T; 0 other; aj311031 Length: 2750 14-NOV-2006 Type: N Check: 440 .. 1 accccgcgtg gtggcccccg acgcgcactc ggcttttcgt gagtgcgcgg 51 aggcttttgg accacatctt ttctgatcac tttcgtggaa gatgttgatt 101 tatcacactt ttgacttgga aatctgtgcc atgccttagc ttataaggaa 151 gtgcgcggta gcccatctcg atggagcagg caatagcccc cccgcttcct 201 atacgggact atcaatacca gaccccttcc aatcccggtt cctccgacta 251 cgcctggcga acatttgtgt tcgttacctt cggtttgtta atagccgtag 301 gcgttgcttg gcttgcttac actctgtttc tgaaagattt aattttagtg 351 tgtaaggcga agaagcaaag gaggaccgag gaaattggtt acgggaatac 401 accggccaga ttaaatggtg accaacaagg actcccgagg taaggggaaa 451 cgtaagctcg aagagggaga atccagcgga aggtggaagg gggctgtgta 501 taagcggcgt aaacagacgt ataaggtagt acctgtgaag cccccagctc 551 tctgcgtatt ccgctacaac tggttgaata gcgacaggac caatattgtt 601 gtgggtaata caccccgggt cgatctgatt acctgttttg ctcagggtaa 651 ggccgataat aatcggcata caaatcagac cgtcctatac aaatttaaca 701 tacagggtac ctgctatatg tccgatgcat cagctccgtt catcggtcca 751 gtccgcctct accactggtt agtctatgat gcagagccga aacaggcaat 801 gccagacgcc actgacatct ttacgatgcc ttggaatctg ctgccgagta 851 cgtggactgt gcaacgtgct tggtcgcatc gattcgtggt gaaaaggaag 901 tggaccgtga accttgttac tgatggacgg aaggtcgggt ctaagaccgt 951 tgaccaacgc tacaactggg tagtcggcaa gaatatcgtg gacgcgaaca 1001 agttcttcaa aggtttgcgt gtcacgacgg agtggatgaa cacgggtgac 1051 ggcaagatag gcgacattaa gaagggagca ctgtatctca taagcagtac 1101 tcgtggtggt gttactggtg acagtgcctc tacggcgttt gatgttgtat 1151 gtgcctatac gcacgcgtgt tatttcaaag ccatcggcat tcagtaataa 1201 aataatattt tatttatctc atgtcattcg attacagagg ctcggctacg 1251 agcaaagaca aaccaaatta taacaaaaaa caacccttac acaatgacat 1301 cggaaaacga aatacaacac cctgagatat tacatttata gaaactgtac 1351 gccgtccgcg ctaggacagt cactgcgaag cagtgacatc ttcgccggag 1401 gcgaacgagt agttgatgaa agactcgcct tcatacatgt agtgaacaac 1451 agcgttagag tacatgtaat ccgactgttc gggagtcata tccttgagcc 1501 aatcttcgtc tggattaact aaaatgatgc aaggtattcc accccgtatg 1551 acttttcgct taccatattt tggattgacc gtgaagtcac gctgagcccc 1601 gacgaagcac ttccagttcg gtgtgaactt gaatggaatg tcgtcgatga 1651 tattatactt ggcgttgacg tcatatgttg tgaaatcaac tagactgtta 1701 taataattgt gtgtccctag agaccttgcc caggaagtct ttcctgttct 1751 ggttggcccg cagatgtaga tggacttatg cctccccggt gactcctgga 1801 ataatcgtcc atccactcta agtcagattg cgcttgatcc gcaggagtgg 1851 aagtacaaat gatataggat tcgaggctta cggagtagag atgttcattt 1901 ttccagcttt caatggtctc atggcaaatg agtgattcgg ttggaaactc 1951 aggtgtgtaa gtggcaactg ggtcaggaaa tagatggcgt gccgtgtact 2001 cgaagtcttt gagacggata gaccattcaa acggaaaacg attgcaaacc 2051 atgctgagga attcctcgcg agaggaacta gattcaatga tctgtttcat 2101 atccgcatca cggtctttac gacctggagt tgaaactgcc acgaatgttc 2151 cccactcagc tgtgtttgca tcggagtcaa cctccttcgt gatgtaatca 2201 cgaacttggt tgcagtcttt ggcagcttgt atatttggat ggaatatgga 2251 gaatggagat gtatccatac ggaggtttaa ggcattggga ttggtgatgg 2301 aagcacgaag cttgttctgc acgagaacgt gcagatgtgg tgatccatct 2351 tcgtggagct ctctaacagc agcgatgtag aggggctcat atttgttcaa 2401 gagagtgcga agtgaatcca aggcgtactg tggctcaagg gtacattgag 2451 gatatgttag aaagaggtac ttggaataga cacggaacct gggtgcagat 2501 gaagaggcca tggtagtgaa cagaagtccg gcaggtcctt agcgaaaaaa 2551 cggggtgtgc cagaaaactc tatgctctac cctgcgtgga ggtgtgaatt 2601 ctgcacactg caaatgcaat gtgtccaatg ctttatatag ggcaggtttt 2651 ggcgggagaa cagggccctt gtgttcccac gggagcgtag cgtatcgtgt 2701 gggccctgtt cggtgtgtgg tcggggggcc tccacgcggg ttataatatt