Sequence of DPV African cassava mosaic virus
African cassava mosaic virus-[Nigeria-Ogo] AC1 gene, AC2 gene, AC3 gene, AC4 gene, AV2 gene and AV1 gene
ACC No: AJ427910
Dated: 2005-04-15 | Length: 2781 | CRC: 881885990
!!NA_SEQUENCE 1.0
ID ACA427910 standard; circular genomic DNA; VRL; 2781 BP.
XX
AC AJ427910;
XX
SV AJ427910.1
XX
DT 16-JAN-2002 (Rel. 70, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE African cassava mosaic virus-[Nigeria-Ogo] AC1 gene, AC2 gene, AC3 gene,
DE AC4 gene, AV2 gene and AV1 gene
XX
KW AC1 gene; AC2 gene; AC4 gene; AV1 gene; AV2 gene; coat protein;
KW replication enhancer protein; replication-associated protein;
KW transcriptional activator protein: AC3 gene.
XX
OS African cassava mosaic virus-[Nigeria-Ogo]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2781
RA Briddon R.W.;
RT ;
RL Submitted (12-JAN-2002) to the EMBL/GenBank/DDBJ databases.
RL Briddon R.W., Department of Disease and Stress Biology, John Innes Centre,
RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2781
FT /country="Nigeria"
FT /db_xref="taxon:222074"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="African cassava mosaic virus-[Nigeria-Ogo]"
FT /clone="APA9"
FT /isolate="Ogoroco"
FT /lab_host="Nicotiana benthamiana"
FT /specific_host="Manihot esculenta"
FT CDS 136. .477
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q8V6Z8"
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CAD20823.1"
FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL
FT VSVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDKQAHV
FT QKAHNVQDV"
FT CDS 296. .1072
FT /db_xref="GOA:Q8V6Z7"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8V6Z7"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CAD20824.1"
FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW
FT INRPMYRKPTMYRMYRSPDIPRGCEGPCKVQSYEQRDDVKHLGICKVISDVTRGPGLTH
FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNMFDN
FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
FT CDS complement(1069. .1473)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q8V6Z6"
FT /product="replication enhancer protein"
FT /gene="AC3"
FT /protein_id="CAD20825.1"
FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI
FT ITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISIND
FT VIRAADHVLFNVIAKTIECQLTHEIKFNVY"
FT CDS complement(1214. .1621)
FT /db_xref="GOA:Q8V6Z5"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8V6Z5"
FT /product="transcriptional activator protein"
FT /gene="AC2"
FT /protein_id="CAD20826.1"
FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI
FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ
FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL"
FT CDS complement(1530. .2606)
FT /db_xref="GOA:Q8V6Z4"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8V6Z4"
FT /product="replication-associated protein"
FT /gene="AC1"
FT /protein_id="CAD20827.1"
FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHQLSFIQTLSLPSNPKFIKI
FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPTCSTNFHPNIQGAKSSSDVKSYLD
FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKGLNSGSKSEALNVIRELVPKDFVLQFHN
FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVIEGAS
FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY
FT SGSNQSQSQTIQEASHPA"
FT CDS complement(2150. .2701)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8V6Z3"
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAD20828.1"
FT /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSTCELRVLEFKPRMS
FT FSHTQSVLYPKNTSCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRGKSRLRTI
FT VSSIVYTQPVAPISTPTFKVPNQAQMSSPIWIRTETPSNGDNFRSMDDLLEAVNNQRMM
FT LTPKALTAAVSQKLLMSLGN"
XX
SQ Sequence 2781 BP; 751 A; 557 C; 679 G; 794 T; 0 other;
AJ427910 Length: 2781 April 19, 2005 08:55 Type: N Check: 4696 ..
1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacttatg
51 tcggccaatc atgctgtagc tttaaaggtt atgtattagt ggtggaccac
101 tatatactta caggcgaagt tgttgctagt gcgcaatgtg ggatccactg
151 gtgaatgagt ttccagactc ggtgcatggg cttaggtgta tgcttgcaat
201 taaatatttg caggccttag aggatacata cgagcccagt actttgggcc
251 acgatttggt tagagatcta gtctcagtta tcagggctcg taattatgtc
301 gaagcgacca ggagatatca tcatttccac tccaggctcg aaggttcgtc
351 gaaggctgaa cttcgacagc ccatacagga accgtgctac tgcccccact
401 gtccacgtca caaatcgaaa acgggcctgg ataaacaggc ccatgtacag
451 aaagcccaca atgtacagga tgtatagaag cccagacata cctaggggct
501 gtgaaggccc atgtaaggtc cagtcgtatg agcagaggga tgatgtgaag
551 caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct
601 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacatacttg
651 gtaagatctg gatggatgaa aatattaaga agcaaaatca cacgaataat
701 gtgatgtttt atctgcttag ggatagaagg ccttatggca atgcgcccca
751 agactttggg cagatattta atatgtttga taatgagccc agtactgcaa
801 caattaagaa cgatttgagg gataggtttc aggtattgag gaaatttcat
851 gccactgtta ttggtggtcc atctggcatg aaggagcagg ctttggttaa
901 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag
951 ggaagtatga gaatcacaca gagaatgctt tgcttctgta catggcatgt
1001 actcatgcct ccaatcctgt atatgctacg ttgaaaatac gtatatactt
1051 ctatgacagt attggcaatt aataaacatt gaattttatt tcatgagtca
1101 actgacactc aatagttttg gcaattacat tgaacaaaac atgatcagca
1151 gctctaatga catcgttaat tgagataaca cctatattat ccaagtattt
1201 aagtacttgg tatctaaaga cccttaagaa aagaccagtc tgaggccgta
1251 aggtcgtcca gatcctgaag ttgagaaaac atttgtgaat ccccagctcc
1301 ttcctcaggt tgtgattgaa tcgaacctgg actgttatga tgtcctggtt
1351 cagcaggaat ggtcgttgtt ggtgcctggt gattgtgaaa tacaggggat
1401 tgtttatttc ccaggtatac acgccattca ttgcttgagg agcagtgatg
1451 agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat
1501 atgaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc
1551 ttgaattgtc tgtgactgac tttgattgga acctgagtag agtggttctg
1601 tgagggtgat gaagattgca ttctttaatg cccaggcctt tagcgcttct
1651 tgcttttcct cgtctaggaa ctctttatag gacgaggtag gtcctggatt
1701 gcagaggaag atagtgggaa tgccaccttt aatttgaacg ggtttcccgt
1751 atttcgtgtt ggactgccag tccctctggg accccatgaa ttctttaaag
1801 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc
1851 attattgaag acctttggac taaggtccag gtgtccacac aggtaattgt
1901 gtgggcctaa agatctggcc catatcgtct tccctgttct gctagcacct
1951 tctattacaa tactattggg tctccatggc cgcgcagcgg aatccctaac
2001 attatcagcg acccattctt caatttcaac aggaacttgg tcaaaggaag
2051 aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta
2101 tctaaattac tattgagatt atgaaattga agtacaaagt cctttgggac
2151 taattcccta atgacattaa gagcttctga cttactgccg ctgttaaggc
2201 ctttggcgta agcatcattc gctgattgtt gaccgcctct agcagatcgt
2251 ccatcgatct gaaattgtcc ccattcgacg gtgtctccgt ccttatccag
2301 ataggacttg acatctgagc ttgatttggc accttgaatg ttggggtgga
2351 aattggtgct acaggttggg tgtacacaat cgaagagacg attgttcgta
2401 atcgtgattt tcccctcgaa ttggatgagg gcatgcaagt gaggttcccc
2451 attctgatgc agctctctac agattttaat gaacttaggg tttgatggga
2501 gagatagtgt ttgaatgaat gacagctggt gttctttggg tatagaacac
2551 tttgggtatg tgagaaagac attcttggct tgaactctaa aacgcggagt
2601 tcgcatgttg accaagtcaa ttggagacac tcaactagag acactcttga
2651 gcatctcctc ctgttaattg gagacattat ataggtgtct ctaaatggca
2701 ttcttgtaat aagttgaact ttaatttgaa ttaaaaggct caaaaggcgc
2751 agaacaccca aggggccaac cgtataatat t