Sequence of DPV Mungbean yellow mosaic India virus
Legume yellow mosaic virus complete genomic DNA-A, isolate 14
ACC No: AJ512495
Dated: 2005-04-15 | Length: 2746 | CRC: -1079983779
!!NA_SEQUENCE 1.0 ID LYE512495 standard; circular genomic DNA; VRL; 2746 BP. XX AC AJ512495; XX SV AJ512495.1 XX DT 15-JAN-2003 (Rel. 74, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Legume yellow mosaic virus complete genomic DNA-A, isolate 14 XX KW AC2 gene; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene; KW coat protein; complete genomic DNA-A; pre-coat protein; Rep gene; KW replication associated protein; replication enhancer protein; KW transcriptional activator protein. XX OS Legume yellow mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RA Robinson D.J.; RT ; RL Submitted (15-OCT-2002) to the EMBL/GenBank/DDBJ databases. RL Robinson D.J., Host-Parasite Co-evolution, Scottish Crop Research RL Institute, Invergowrie, Dundee, DD2 5DA, UNITED KINGDOM. XX RN [2] RA Hameed S.; RT "Molecular diversity of begomoviruses of legumes and cucurbits in RT Pakistan"; RL Thesis (1999), Department of Biological Sciences, University of Dundee, RL Dundee, United Kingdom. XX RN [3] RX DOI; 10.1007/s00705-003-0256-9. RX PUBMED; 15045567. RA Hameed S., Robinson D.J.; RT "Begomoviruses from mungbeans in Pakistan: epitope profiles, DNA A RT sequences and phylogenetic relationships"; RL Arch. Virol. 149(4):809-819(2004). XX FH Key Location/Qualifiers FH FT source 1. .2746 FT /country="Pakistan" FT /db_xref="taxon:211101" FT /mol_type="genomic DNA" FT /virion FT /organism="Legume yellow mosaic virus" FT /isolate="14" FT /specific_host="Vigna radiata" FT CDS 156. .497 FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProt/TrEMBL:Q80P67" FT /transl_table=1 FT /gene="AV2" FT /product="putative pre-coat protein" FT /protein_id="CAD54702.1" FT /translation="MWDPLLNDFPKSVHGFRCMLAIKYLQQVQENYPSNSVGYSYLTGL FT IQVLRIRNHAKADLRYCLLYPDIECTEEIELRYPAHAPCLCGRCPYQHEKKALDQPPHV FT EETSVLPTV" FT CDS 316. .1089 FT /db_xref="GOA:Q80P66" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProt/TrEMBL:Q80P66" FT /transl_table=1 FT /gene="AV1" FT /product="putative coat protein" FT /protein_id="CAD54703.1" FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEHRHDIAHTGKVICISDVTRGNGITH FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE FT PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(1086. .1490) FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProt/TrEMBL:Q80P65" FT /transl_table=1 FT /gene="AC3" FT /product="putative replication enhancer protein" FT /protein_id="CAD54704.1" FT /translation="MDYRTGEYITAAQLRSGVYIWEVQNPLSFKIMHHSPIRAGSRMMV FT TKLRIMFNHRLKKALGMHKCFLELKLYHYLTATSGMILSIFRNQLFRFLNNLGVISLAN FT ILYFASDFLYNKLHLVEDVSFTHNVQYKLY" FT CDS complement(1228. .1680) FT /db_xref="GOA:Q80P64" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProt/TrEMBL:Q80P64" FT /transl_table=1 FT /gene="AC2" FT /product="putative transcriptional activator protein" FT /protein_id="CAD54705.1" FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS FT RIDLTCGCSYYIHINCRNYGLSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV FT QNDGHQAAHNVQPQVEESTGDAQVLPGIEALPLFDGDFWDDLIDLP" FT CDS complement(1538. .2626) FT /db_xref="GOA:Q80P63" FT /db_xref="HSSP:1L5I" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProt/TrEMBL:Q80P63" FT /transl_table=1 FT /gene="Rep" FT /product="putative replication associated protein" FT /protein_id="CAD54706.1" FT /translation="MPREGRFAINAKNYFLTYPKCPLTKEDALEQLLALSTPVNKKFIR FT ICRELHEDGQPHLHVLLQFEGKQQTKNQRFFDLHSRCRSAYYHPNIQAAKSCSDVKSYM FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH FT NLNCNLSRIFTEPVQAYQSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL FT FSSVNQGSTQGRQEESNSTISN" FT CDS complement(2176. .2475) FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProt/TrEMBL:Q805N0" FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="CAD54707.1" FT /translation="MKMDSLISMFCFSSKGNNKRKTKGSSTSIPDADRHITIRTFRQLK FT AAQMLNHTWRKTETSLIMELSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY" XX SQ Sequence 2746 BP; 729 A; 578 C; 616 G; 823 T; 0 other; AJ512495 Length: 2746 April 19, 2005 08:55 Type: N Check: 4441 .. 1 acctgagtgc cccgcgaccg gtgtattggg gttgctttag cttttttgct 51 ttttgggtac ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc 101 tatgttaatt caaatttgaa ttataaagca tgtgcacact ctgaacccac 151 taacaatgtg ggatccattg ttgaacgact ttcccaaatc agtgcatgga 201 ttccggtgca tgttggcaat aaagtatttg cagcaagttc aagagaatta 251 tccctctaat tctgttggtt attcgtacct tacagggtta attcaggtat 301 tgcgcatccg gaatcatgcc aaagcggacc tacgatactg ccttctctac 351 cccgatatcg aatgcacgga ggagattgaa cttcgatacc ccgctcatgc 401 tccctgcctc tgcgggaggt gtccctacca acatgaaaag aaggcgttgg 451 accaaccgcc ccatgtggag gaaacctcgg ttttaccgac tgtataggtc 501 ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt caatcatttg 551 agcataggca tgatattgcc cacacaggca aagtgatttg catatcggac 601 gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat 651 caagtccgtg tacattactg ggaaggtttg gatggacgaa aacattaagt 701 ccaaaaatca cacgaacact gtgatgttca agttatgtcg tgacagacga 751 ccatttggta cacccatgga ttttggtcaa gtgttcaaca tgtatgacaa 801 cgagcccagt acagctactg tgaagaacga tctgcgtgat cgttatcaag 851 tattgcgaaa gtttaatgcc accgttactg gtggccaata tgcttgtaag 901 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta 951 taaccaccag gaggcagcga agtatgagaa ccatactgag aacgcattat 1001 tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaactctt 1051 aaaattcgga tctattttta cgattcgata ttgaattaat aaagtttgta 1101 ttgaacatta tgcgtaaagc ttacatcctc caccagatgg agtttattgt 1151 acaggaaatc cgacgcgaaa tataaaatat ttgctaagct aatgacccct 1201 aaattattta gaaacctaaa taattggtta cggaagatcg ataagatcat 1251 cccagaagtc gccgtcaaat agtggtagag cttcaattcc aggaagcact 1301 tgtgcatccc cagtgctttc ttcaacctgt ggttgaacat tatgcgcagc 1351 ttggtgacca tcattctgga ccctgctcga attggactgt ggtgcatgat 1401 cttgaaagag aggggatttt gcacctccca gatatagacg ccactcctga 1451 gttgagctgc agtgatgtac tcccctgtgc gataatccat agttacggca 1501 gttgatatgg atgtaatagc tacacccaca ggttagatca attcgagatc 1551 gtcgaattgc tctcttcttg gcgaccctgt gttgaacctt gattgacgga 1601 ggagaacagt ggttctttga gggtgtagaa ttccgcattc tttgaagccc 1651 actgtttaag cgcagcattg ttctcttcat ccaagtactc tttataggag 1701 gacttgggac cagggttaca cagaaagatg gtggggatac cacctttaat 1751 tttagtgggc ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc 1801 ccatgaattc tttgaaatgt ttcaagtaat gtggatcaac gtcatcgatg 1851 acgttgtacc aagcctcgtt agagtatgtt ttgtcgttta gatccaaatg 1901 gccgcaaaga taattatgag gacctatggc acgtgcccac atggttttac 1951 ctgtgcgact atctccttca ataacaatac taataggtct atctggccgc 2001 gcagcgggat ctctcacatt tctttcagcc caagaagaaa tgtagcttgg 2051 aaccttgtta aatgactcca gtgtaaaagg cgactgatat gcctgtacag 2101 gctctgtgaa tatccgagac aaattacaat ttaagttatg aaattgtaaa 2151 ataaaatcct taggagcctt ttcctttaat ataaggaggg cctccaactt 2201 tgatccagag ttgagtgcct cggcgtatgc gtcgttggca gattgtttac 2251 ctcctctagc tgatcggcca tcgatttgga aagttccatg atcaaggatg 2301 tctccgtctt tctccatgta tgatttaaca tctgagcagc ttttagctgc 2351 ctgaatgttc ggatggtaat atgccgatct gcatctggaa tggaggtcga 2401 agaacctttg gtttttcgtt tgttgtttcc cttcgaactg aagcagaaca 2451 tggagatgag gctgtccatc ttcatggagt tctcgacaga tgcggatgaa 2501 tttcttgtta actggtgttg acaaggctag aagttgctca agagcgtcct 2551 cctttgtaag aggacatttg ggatatgtca agaaatagtt ttttgcgttt 2601 atagcaaaac gaccttccct aggcatattt gaagtcgttt ttgtatcggt 2651 gtacaccgat tacttctcta tccccctatc ggtgtatcgg tgtcttatat 2701 atactagagc tactaaaagc ccataggggc actcagctat aatatt