Sequence of DPV Zinnia leaf curl betasatellite

Zinnia leaf curl virus-associated DNA beta C1 gene, clone tz-4

ACC No: AJ542499

Dated: 2010-01-07 | Length: 1354 | CRC: -128399805

                
ID   AJ542499; SV 1; circular; genomic DNA; STD; VRL; 1354 BP.
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AC   AJ542499;
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DT   10-MAY-2004 (Rel. 79, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Zinnia leaf curl virus-associated DNA beta C1 gene, clone tz-4
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KW   C1 gene.
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OS   Zinnia leaf curl virus-associated DNA beta
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites;
OC   Begomovirus-associated DNA beta-like sequences.
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RN   [1]
RP   1-1354
RA   Bull S.E.;
RT   ;
RL   Submitted (04-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane,
RL   Norwich, Norfolk, NR4 7UH, UNITED KINGDOM.
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RN   [3]
RX   DOI; 10.1007/s00705-003-0282-7.
RX   PUBMED; 15168205.
RA   Bull S.E., Tsai W.S., Briddon R.W., Markham P.G., Stanley J., Green S.K.;
RT   "Diversity of begomovirus DNA beta satellites of non-malvaceous plants in
RT   east and south east Asia";
RL   Arch. Virol. 149(6):1193-1200(2004).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1354
FT                   /organism="Zinnia leaf curl virus-associated DNA beta"
FT                   /host="Zinnia sp."
FT                   /mol_type="genomic DNA"
FT                   /country="Thailand:Pattaya"
FT                   /isolation_source="host leaf"
FT                   /clone="tz-4"
FT                   /db_xref="taxon:220813"
FT   CDS             complement(188. .544)
FT                   /transl_table=1
FT                   /gene="C1"
FT                   /product="C1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:Q70UF1"
FT                   /protein_id="CAD65762.1"
FT                   /translation="MTIKYSNKKGMSFIIDVRLRTTRRVSVEIDLFSTTTPFLHKQRYI
FT                   IPYGHQGLIGPFDFNGLEESIKNIFKVMYEDSPTGGFKAEDMIELVDILMMQEAHVIEI
FT                   NLDEEYKVSKHTSV"
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SQ   Sequence 1354 BP; 405 A; 236 C; 299 G; 414 T; 0 other;

aj542499 Length: 1354  07-JAN-2010  Type: N  Check: 4836  ..

       1  accggtggcg agcggggtct ttggagttcc aggtggaccc cacacatgga
      51  acaggacatg gacagaacgt gagtgggcca gatgaatggg ctttattaat
     101  gggttcttta atttgggctt ggattgacta aatatactcg tatatttatg
     151  aaaatgcatt acatttattg aaacgtataa atacgtatta cacggatgta
     201  tgttttgaca ccttatattc ttcgtctaaa tttatttcta ttacatgggc
     251  ttcttgcatc atgaggatat ctactagttc tatcatgtcc tctgccttga
     301  acccccccgt tggtgaatct tcgtacatga ccttgaatat gttcttgatg
     351  ctctcttcta gcccgttgaa gtcgaatgga cctatcagtc cctggtgtcc
     401  gtatggtatg atgtacctct gcttgtgaag aaatggagtt gtggtggaga
     451  acaaatctat ctcaacggaa accctccttg ttgttcttag cctgacatct
     501  atgatgaaag acatgccctt cttgttgcta tatttgatcg tcattgtttc
     551  tgtgttgttg gtcgttgtgt gatggtatgc atttatagag gatgtctgct
     601  ggttgtgtgg ttgatgtttt gatacgtgtg cattcctctt tcatataaac
     651  atgagtggat atctttatga ttgatggtga tattgctatt aaacttttac
     701  taattaatct tgagtaatta agttataatg tatgataatt taaattatca
     751  tacattcgtc taaaaataaa gaagttccgg aagaacttga agagtgggtg
     801  tctgagaatg taaacaacca taaacatata aaaaaaaaga aaaacggata
     851  aaagcatgga taatcttgag aaaaaaaggg agcgcagcga aaaaaaaaaa
     901  aaaaacaaac tgactgagag aaaaataaaa ggtcttccgt attagaaata
     951  cggatgaaaa tagaaaataa aaaaataaaa gggatctaga acggtgacgt
    1001  actcaagttt ttaccattta cagcgcggta aatggtaaat gggtgaaaga
    1051  gaggtaaaca tcttggacac caataggtaa attgtcccca atatattggg
    1101  gacaatcggt gacattggag actcatattt tatactttcc cattttgccc
    1151  tcatttttgt gtctagtagg cgcgtgggag tgctctgaaa aagtacatct
    1201  tctctctcca aaactcgccg gagaagacga aactcgacga ttccgacctc
    1251  tatttgcgac acgcagggcg gtgtgtaccc ctgggagggt aggtaccact
    1301  acgctacagc agccttagct acgccggagc ttagctcgcc accgttttaa
    1351  tatt