Sequence of DPV Tomato leaf curl China virus

Tomato leaf curl China virus - [G18] DNA A, complete sequence, isolate G18

ACC No: AJ558119

Dated: 2004-04-05 | Length: 2733 | CRC: 1358263267

                !!NA_SEQUENCE 1.0
ID   TLE558119  standard; circular genomic DNA; VRL; 2733 BP.
XX
AC   AJ558119;
XX
SV   AJ558119.1
XX
DT   05-JAN-2004 (Rel. 78, Created)
DT   05-APR-2004 (Rel. 79, Last updated, Version 2)
XX
DE   Tomato leaf curl China virus - [G18] DNA A, complete sequence, isolate G18
XX
KW   AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein;
KW   AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein.
XX
OS   Tomato leaf curl China virus - [G18]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   Tomato leaf curl virus-[China].
XX
RN   [1]
RP   1-2733
RA   Zhou X.;
RT   ;
RL   Submitted (02-MAY-2003) to the EMBL/GenBank/DDBJ databases.
RL   Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL   Road, Hangzhou, 310029, CHINA.
XX
RN   [2]
RA   Ma X.;
RT   "Molecular characterization of begomoviruses infecting tomato in
RT   Guangxi,china";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2733
FT                   /country="China:Guangxi"
FT                   /db_xref="taxon:269302"
FT                   /mol_type="genomic DNA"
FT                   /virion
FT                   /organism="Tomato leaf curl China virus - [G18]"
FT                   /segment="DNA A"
FT                   /isolate="G18"
FT                   /specific_host="Lycopersicon esculentum"
FT   CDS             126. .476
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="CAD90074.1"
FT                   /translation="MWDPLLNQFPETVFGLRCMLAVKYLQLVEHTYSPDTVGYELIRDL
FT                   ISVVRARKYAEATSRYEHFNARMEGTPSAELRQPVRCPCTCPYCPRHVKIKGMGQSAHV
FT                   SEAQDLQNVQEP"
FT   CDS             286. .1059
FT                   /gene="AV1"
FT                   /product="AV1 protein"
FT                   /function="coat protein"
FT                   /protein_id="CAD90075.1"
FT                   /translation="MPKRLADMSISMPGWKVRRRLNFDSPSAARAPVLIAPAMSKSKAW
FT                   ANRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGNGLTH
FT                   RVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPSGTPSDFQQVFNVYDNE
FT                   PSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYEN
FT                   HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT   CDS             complement(1056. .1460)
FT                   /gene="AC3"
FT                   /product="AC3 protein"
FT                   /protein_id="CAD90076.1"
FT                   /translation="MDSRTGELITATQAENGVFIWEITNPLYFKITELRNRPFLSDKDI
FT                   VTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNFGVISLNN
FT                   VIRAVNYVLWDALTQTTFVQSSHIIKFNLY"
FT   CDS             complement(1201. .1608)
FT                   /gene="AC2"
FT                   /product="AC2 protein"
FT                   /protein_id="CAD90077.1"
FT                   /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSL
FT                   NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPVGQRHSDGQDPIQLQ
FT                   PEESTGDAPMFSGLPDMDELTPSDWSFLKSI"
FT   CDS             complement(1508. .2596)
FT                   /gene="AC1"
FT                   /product="AC1 protein"
FT                   /function="Rep protein"
FT                   /protein_id="CAD90078.1"
FT                   /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIR
FT                   ICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYM
FT                   DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH
FT                   NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPLSSLCNPGPNSSYKEYLDEEKNLALKSWAIKNAVFVSITEPL
FT                   YSSTYQSPAQDSQEENNQETED"
FT   CDS             complement(2146. .2439)
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /protein_id="CAD90079.1"
FT                   /translation="MGLLTCMCSSNSKENSSVKIKDSSISHPQAGQHISIRTFRQLKAQ
FT                   QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY"
XX
SQ   Sequence 2733 BP; 696 A; 574 C; 625 G; 838 T; 0 other;

 AJ558119  Length: 2733  April 20, 2004 09:35  Type: N  Check: 9662  ..

       1  accggatggc cgcgcgattt tttttggtgg tcccctctat ccttcgtcca
      51  atcagaagcg ctcctcaaag cttatttatc atcttttcct tataaatact
     101  tggccaccaa gtagtttatt gcaacatgtg ggatccactt ttaaatcagt
     151  tcccagagac cgtatttggt cttaggtgta tgctcgcagt taagtacctg
     201  caacttgtcg agcatacgta ttctccggat acagttggtt acgagcttat
     251  tcgcgatctt atttccgtag ttcgtgcccg taagtatgcc gaagcgacta
     301  gccgatatga gcatttcaat gcccggatgg aaggtacgcc gtcggctgaa
     351  cttcgacagc ccgtccgctg cccgtgcacc tgtccttatt gcccccgcca
     401  tgtcaaaatc aaaggcatgg gccaatcggc ccatgtatcg gaagcccagg
     451  atctacagaa tgtacaggag ccctgatgtg cctaagggct gtgagggtcc
     501  atgtaaggtc cagtcgtttg atgcgaagaa cgacattggt cacatgggta
     551  aggttatatg tttgtccgat gttacgaggg gaaatggttt gactcatcga
     601  gttggtaaac gtttctgcgt taagtcattg tattttgtgg gcaagatttg
     651  gatggatgag aacatcaagg ttaagaacca cactaacacc gttttgttct
     701  ggattgtccg agacaggcgt cctagtggca cccctagtga ttttcagcag
     751  gtctttaatg tttatgataa cgagccgtct accgctactg ttaagaacga
     801  tcagcgcgat cgttaccaag tgatacgcag gtttcaggca acggtgactg
     851  gtggacaata tgcagctaag gaacaggcga taattagaag attttatcgt
     901  gttaataatt acgtagtgta caatcaccag gaagctggga agtacgagaa
     951  ccatactgaa aatgctctgt tgttgtatat ggcatgtact catgcctcta
    1001  accccgtgta tgctactttg aaagtgagga gttatttcta tgactcagtc
    1051  acgaattaat aaagattaaa ttttattata tgagaacttt gtacaaatgt
    1101  tgtttgcgtt aatgcgtccc ataatacata attcactgct ctaattacat
    1151  tattcaaact aattacaccg aaattattga ggaacttcaa aacttgtgtt
    1201  ctaaatactc ttaagaaacg accagtctga aggtgtgagt tcgtccatat
    1251  ccggaagtcc agaaaacatt ggtgcatccc cagtgctttc ctcaggttgt
    1301  agttgaattg gatcctgacc gtcactatgt ctttgtccga caggaagggc
    1351  ctgtttcgta gttccgttat cttgaaatac aggggatttg ttatctccca
    1401  gataaaaacg ccattctctg cctgagttgc agtgatgagt tcccctgtgc
    1451  gtgaatccat ggttggcgca gttaagtgag ctgaaataag aacaaccaca
    1501  gggaaggtca atcctccgtc tcctggttat tttcttcttg gctatcctgt
    1551  gctggacttt gataggtact tgagtacagt ggctcggtga tgctgacgaa
    1601  gactgcattt tttattgccc acgactttaa tgcaagattc ttttcctcgt
    1651  ctaggtattc tttatagctt gagttgggcc ctggattgca gagggaagat
    1701  agcggaatgc cacctttaat ttgaaccggc tttccgtact ttgtgttgct
    1751  ttgccagtcc ctttgggccc ccatgaattc tttaaaatgc tttagatagt
    1801  gcggatcgac gtcatcaatg acgttgtacc aggcatcgtt attgtatact
    1851  tttggactca aatcaagatg accacacaaa taattatgtg gtcctaatga
    1901  cctggcccac attgttttcc ccgtccgact atcgccttcg ataactatac
    1951  ttatcggtcg taatggccgc gcagcggaac tgacgacgtt ctctgcagcc
    2001  cactcttcga gttcctctgg aactcgatca aacgaagaag aagaaaaagg
    2051  cgaaacataa acctccatcg gaggagtaaa aatcctatct aaattattat
    2101  ttaaattatg aaactgtaaa acataatctt taggagcttt ctcccttagt
    2151  atattgaggg ccgaagcttt ggaccctgaa ttgattgcct cggcatatgc
    2201  gtcgttggca gattggcaac ctcctctagc cgatcttcca tcgatctgga
    2251  aaactccatg atcaagcacg tctccgtctt tgtccatgta ggacttgaca
    2301  tctgttgagc ttttagctgc ctgaatgttc ggatggaaat gtgctgacct
    2351  gcttggggat gtgagatcga agaatctttg atttttacac tggaattttc
    2401  cttcgaattg gatgagcaca tgcaggtgag gagacccatc ttcgtgtaat
    2451  tctctgcaga tgcggataaa tagtttattt actggggttt ctagggtttt
    2501  aatttgggaa agtgcttctt ctttagtgag ggagcagtgt ggatatgtga
    2551  ggaaataatt tttcgcattt attctgaatt tatttggggg agccattgac
    2601  tggtcaatcg gtgtctctca aacttggcta tgcaattggt gtctggtgtc
    2651  ttatttatat gtggacacca aatggcatta tcgtaattcc cataagaatt
    2701  tcaaaatcca aaagcggcca tccgtataat att