Sequence of DPV Tomato leaf curl China virus
Tomato leaf curl China virus - [G18] DNA A, complete sequence, isolate G18
ACC No: AJ558119
Dated: 2004-04-05 | Length: 2733 | CRC: 1358263267
!!NA_SEQUENCE 1.0 ID TLE558119 standard; circular genomic DNA; VRL; 2733 BP. XX AC AJ558119; XX SV AJ558119.1 XX DT 05-JAN-2004 (Rel. 78, Created) DT 05-APR-2004 (Rel. 79, Last updated, Version 2) XX DE Tomato leaf curl China virus - [G18] DNA A, complete sequence, isolate G18 XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS Tomato leaf curl China virus - [G18] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC Tomato leaf curl virus-[China]. XX RN [1] RP 1-2733 RA Zhou X.; RT ; RL Submitted (02-MAY-2003) to the EMBL/GenBank/DDBJ databases. RL Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan RL Road, Hangzhou, 310029, CHINA. XX RN [2] RA Ma X.; RT "Molecular characterization of begomoviruses infecting tomato in RT Guangxi,china"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .2733 FT /country="China:Guangxi" FT /db_xref="taxon:269302" FT /mol_type="genomic DNA" FT /virion FT /organism="Tomato leaf curl China virus - [G18]" FT /segment="DNA A" FT /isolate="G18" FT /specific_host="Lycopersicon esculentum" FT CDS 126. .476 FT /gene="AV2" FT /product="AV2 protein" FT /protein_id="CAD90074.1" FT /translation="MWDPLLNQFPETVFGLRCMLAVKYLQLVEHTYSPDTVGYELIRDL FT ISVVRARKYAEATSRYEHFNARMEGTPSAELRQPVRCPCTCPYCPRHVKIKGMGQSAHV FT SEAQDLQNVQEP" FT CDS 286. .1059 FT /gene="AV1" FT /product="AV1 protein" FT /function="coat protein" FT /protein_id="CAD90075.1" FT /translation="MPKRLADMSISMPGWKVRRRLNFDSPSAARAPVLIAPAMSKSKAW FT ANRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGNGLTH FT RVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPSGTPSDFQQVFNVYDNE FT PSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1056. .1460) FT /gene="AC3" FT /product="AC3 protein" FT /protein_id="CAD90076.1" FT /translation="MDSRTGELITATQAENGVFIWEITNPLYFKITELRNRPFLSDKDI FT VTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNFGVISLNN FT VIRAVNYVLWDALTQTTFVQSSHIIKFNLY" FT CDS complement(1201. .1608) FT /gene="AC2" FT /product="AC2 protein" FT /protein_id="CAD90077.1" FT /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPVGQRHSDGQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT CDS complement(1508. .2596) FT /gene="AC1" FT /product="AC1 protein" FT /function="Rep protein" FT /protein_id="CAD90078.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPLSSLCNPGPNSSYKEYLDEEKNLALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSQEENNQETED" FT CDS complement(2146. .2439) FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="CAD90079.1" FT /translation="MGLLTCMCSSNSKENSSVKIKDSSISHPQAGQHISIRTFRQLKAQ FT QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2733 BP; 696 A; 574 C; 625 G; 838 T; 0 other; AJ558119 Length: 2733 April 20, 2004 09:35 Type: N Check: 9662 .. 1 accggatggc cgcgcgattt tttttggtgg tcccctctat ccttcgtcca 51 atcagaagcg ctcctcaaag cttatttatc atcttttcct tataaatact 101 tggccaccaa gtagtttatt gcaacatgtg ggatccactt ttaaatcagt 151 tcccagagac cgtatttggt cttaggtgta tgctcgcagt taagtacctg 201 caacttgtcg agcatacgta ttctccggat acagttggtt acgagcttat 251 tcgcgatctt atttccgtag ttcgtgcccg taagtatgcc gaagcgacta 301 gccgatatga gcatttcaat gcccggatgg aaggtacgcc gtcggctgaa 351 cttcgacagc ccgtccgctg cccgtgcacc tgtccttatt gcccccgcca 401 tgtcaaaatc aaaggcatgg gccaatcggc ccatgtatcg gaagcccagg 451 atctacagaa tgtacaggag ccctgatgtg cctaagggct gtgagggtcc 501 atgtaaggtc cagtcgtttg atgcgaagaa cgacattggt cacatgggta 551 aggttatatg tttgtccgat gttacgaggg gaaatggttt gactcatcga 601 gttggtaaac gtttctgcgt taagtcattg tattttgtgg gcaagatttg 651 gatggatgag aacatcaagg ttaagaacca cactaacacc gttttgttct 701 ggattgtccg agacaggcgt cctagtggca cccctagtga ttttcagcag 751 gtctttaatg tttatgataa cgagccgtct accgctactg ttaagaacga 801 tcagcgcgat cgttaccaag tgatacgcag gtttcaggca acggtgactg 851 gtggacaata tgcagctaag gaacaggcga taattagaag attttatcgt 901 gttaataatt acgtagtgta caatcaccag gaagctggga agtacgagaa 951 ccatactgaa aatgctctgt tgttgtatat ggcatgtact catgcctcta 1001 accccgtgta tgctactttg aaagtgagga gttatttcta tgactcagtc 1051 acgaattaat aaagattaaa ttttattata tgagaacttt gtacaaatgt 1101 tgtttgcgtt aatgcgtccc ataatacata attcactgct ctaattacat 1151 tattcaaact aattacaccg aaattattga ggaacttcaa aacttgtgtt 1201 ctaaatactc ttaagaaacg accagtctga aggtgtgagt tcgtccatat 1251 ccggaagtcc agaaaacatt ggtgcatccc cagtgctttc ctcaggttgt 1301 agttgaattg gatcctgacc gtcactatgt ctttgtccga caggaagggc 1351 ctgtttcgta gttccgttat cttgaaatac aggggatttg ttatctccca 1401 gataaaaacg ccattctctg cctgagttgc agtgatgagt tcccctgtgc 1451 gtgaatccat ggttggcgca gttaagtgag ctgaaataag aacaaccaca 1501 gggaaggtca atcctccgtc tcctggttat tttcttcttg gctatcctgt 1551 gctggacttt gataggtact tgagtacagt ggctcggtga tgctgacgaa 1601 gactgcattt tttattgccc acgactttaa tgcaagattc ttttcctcgt 1651 ctaggtattc tttatagctt gagttgggcc ctggattgca gagggaagat 1701 agcggaatgc cacctttaat ttgaaccggc tttccgtact ttgtgttgct 1751 ttgccagtcc ctttgggccc ccatgaattc tttaaaatgc tttagatagt 1801 gcggatcgac gtcatcaatg acgttgtacc aggcatcgtt attgtatact 1851 tttggactca aatcaagatg accacacaaa taattatgtg gtcctaatga 1901 cctggcccac attgttttcc ccgtccgact atcgccttcg ataactatac 1951 ttatcggtcg taatggccgc gcagcggaac tgacgacgtt ctctgcagcc 2001 cactcttcga gttcctctgg aactcgatca aacgaagaag aagaaaaagg 2051 cgaaacataa acctccatcg gaggagtaaa aatcctatct aaattattat 2101 ttaaattatg aaactgtaaa acataatctt taggagcttt ctcccttagt 2151 atattgaggg ccgaagcttt ggaccctgaa ttgattgcct cggcatatgc 2201 gtcgttggca gattggcaac ctcctctagc cgatcttcca tcgatctgga 2251 aaactccatg atcaagcacg tctccgtctt tgtccatgta ggacttgaca 2301 tctgttgagc ttttagctgc ctgaatgttc ggatggaaat gtgctgacct 2351 gcttggggat gtgagatcga agaatctttg atttttacac tggaattttc 2401 cttcgaattg gatgagcaca tgcaggtgag gagacccatc ttcgtgtaat 2451 tctctgcaga tgcggataaa tagtttattt actggggttt ctagggtttt 2501 aatttgggaa agtgcttctt ctttagtgag ggagcagtgt ggatatgtga 2551 ggaaataatt tttcgcattt attctgaatt tatttggggg agccattgac 2601 tggtcaatcg gtgtctctca aacttggcta tgcaattggt gtctggtgtc 2651 ttatttatat gtggacacca aatggcatta tcgtaattcc cataagaatt 2701 tcaaaatcca aaagcggcca tccgtataat att