Sequence of DPV Citrus tristeza virus

Citrus tristeza virus p23 gene, clone 270-23-11

ACC No: AJ579771

Dated: 2003-12-04 | Length: 632 | CRC: 1661516299

                !!NA_SEQUENCE 1.0
ID   CTR579771  standard; genomic RNA; VRL; 632 BP.
XX
AC   AJ579771;
XX
SV   AJ579771.1
XX
DT   06-AUG-2003 (Rel. 76, Created)
DT   04-DEC-2003 (Rel. 78, Last updated, Version 2)
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DE   Citrus tristeza virus p23 gene, clone 270-23-11
XX
KW   p23 gene; RNA binding protein.
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-632
RA   Sambade A.;
RT   ;
RL   Submitted (01-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   , Proteccion Vegetal y Biotecnologia, Instituto Valenciano de
RL   Investigaciones Agrarias, Cra. Moncada-Naquera Km 4,5, Mocada, Valencia
RL   46113, Spain.
XX
RN   [2]
RA   Sambade A., Lopez C., Rubio L., Flores R., Guerri J., Moreno P.;
RT   "Polymorphism of a specific region in gene p23 of Citrus tristeza virus
RT   allows discrimination between mild and severe isolates";
RL   Arch. Virol. 148(12):2325-2340(2003).
XX
DR   SPTREMBL; Q7T6D8; Q7T6D8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .632
FT                   /country="Argentina"
FT                   /db_xref="taxon:12162"
FT                   /mol_type="genomic RNA"
FT                   /organism="Citrus tristeza virus"
FT                   /clone="270-23-11"
FT                   /isolate="C-270-3"
FT   CDS             1. .630
FT                   /db_xref="SPTREMBL:Q7T6D8"
FT                   /gene="p23"
FT                   /function="RNA binding protein"
FT                   /protein_id="CAE30353.1"
FT                   /translation="MDSTSGQTFVSVNLSDESNTASTAVRTVSSEADRLEFLRKMNPFI
FT                   IDALVRKTNYQGARFRAKIIGVCVDCGRKHDKGLKTERKCKVNNTQSQNEVAHMLMHDP
FT                   VKYLNKGKARAFSNAEMFAIDLVMYTKEKQLAVNLAAEREKTRLARRHPMRSPEETPEF
FT                   YKFGITAKAMLPNINAVDVGDNEDTSSEYPVSLSVSDGVLREHHFI"
XX
SQ   Sequence 632 BP; 194 A; 123 C; 155 G; 160 T; 0 other;

AJ579771  Length: 632  December 9, 2003 08:57  Type: N  Check: 1262  ..

       1  atggatagta ctagcggaca aactttcgtt tctgtgaacc tttctgacga
      51  aagcaacaca gcaagtactg cagttagaac cgtaagttcg gaagctgatc
     101  gcttggaatt tttacgaaaa atgaacccct ttatcatcga cgctttggta
     151  cggaaaacca attatcaggg tgctcgcttt cgcgcaaaaa taataggagt
     201  atgcgtagat tgtggtagaa aacacgataa ggggttgaag accgaacgta
     251  aatgtaaggt caataataca cagtctcaaa acgaggtggc gcatatgtta
     301  atgcacgatc ccgttaagta tttaaataaa ggaaaggcta gagccttttc
     351  taacgcagag atgtttgcaa tcgatttggt tatgtacacc aaggaaaagc
     401  agttggcggt taatttggcc gctgaaaggg agaagacgag actggctcgt
     451  agacacccga tgcgttctcc ggaagaaact ccggaattct ataaattcgg
     501  tataactgct aaagcaatgt taccgaacat caacgctgtg gacgttggtg
     551  ataacgagga cacttcgtcg gagtacccag tgagtctgag tgtttctgac
     601  ggagttctcc gtgaacacca cttcatctga tt