Sequence of DPV Sitke waterborne virus

Sitke waterborne virus cp gene for coat protein, genomic RNA

ACC No: AJ607404

Dated: 2003-11-20 | Length: 1276 | CRC: -1341337666

                !!NA_SEQUENCE 1.0
ID   AJ607404   standard; genomic RNA; VRL; 1276 BP.
XX
AC   AJ607404;
XX
SV   AJ607404.1
XX
DT   20-NOV-2003 (Rel. 77, Created)
DT   20-NOV-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Sitke waterborne virus cp gene for coat protein, genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Sitke waterborne virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Tombusvirus.
XX
RN   [1]
RP   1-1276
RA   Willingmann P.;
RT   ;
RL   Submitted (18-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Willingmann P., Dept. Phytomedizin, Inst. fuer Angewandte Botanik,
RL   Ohnhorststrasse 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RA   Heinze C., Zhang D., Lesemann D.E., Willingmann P., Adam G.;
RT   "The coat sequence of the Sikte waterborne Tombusvirus";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1276
FT                   /db_xref="taxon:255521"
FT                   /mol_type="genomic RNA"
FT                   /note="Sitke waterborne SWBV"
FT                   /virion
FT                   /organism="Sitke waterborne virus"
FT   CDS             47. .1177
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE55155.1"
FT                   /translation="MSMVRRNQNQAIMAAGAAAVAHYVGEVAFSPTGQKLIWDGVRFIA
FT                   SKLWNRRSKKGRGQDLVRHPGAQSGAIAAPVAVTRIIRASRPKFVRSKGSVTVTHRELI
FT                   SQIDTSAALSVNKGVTNLYRVNPSNSVLFPWLQTLATNFDQYTFERVRLQYVPLCGTTT
FT                   TGRVALYFDKDSQDDPPSNRIELANMAHLTETSPWAEASLNIPTDRIKRFTNDSATTDT
FT                   KLIDLGQIGVGTYGSTGVAAAGDLFIHYTVTFYEPQPSAGLVSTVRLINGESFTTRTGL
FT                   ITISETSTAFGVSFNSPGTYLIIIQLKATTITDDATSSNTVVNSHFNTFSTSNFTSTRN
FT                   ITINEILSGIVVTGTGFGNHSVNVVRARPINSVTFP"
XX
SQ   Sequence 1276 BP; 367 A; 298 C; 291 G; 320 T; 0 other;

AJ607404  Length: 1276  December 2, 2003 15:01  Type: N  Check: 7263  ..

       1  cccagcatcc ttgactccgc cgtagcatga ccaagcaaac acaaacatgt
      51  cgatggtaag aagaaatcag aatcaagcta ttatggcagc aggagcagcc
     101  gctgttgccc actatgtggg tgaggtggca ttttccccta ctgggcagaa
     151  gttaatttgg gatggagtca gatttattgc atctaaacta tggaacagga
     201  gaagtaagaa agggcgagga caggatcttg tgcgacatcc tggtgcgcag
     251  tcaggagcca ttgcggcccc tgtcgctgtc accaggatta tccgtgctag
     301  taggcctaag ttcgtgcgaa gtaaagggtc ggtgactgta actcatcgtg
     351  agctcatcag tcagatcgat acctcagcag cattatctgt taataaggga
     401  gttaccaact tatatagagt taacccatct aattcggtac tcttcccttg
     451  gttacaaacg ttagcaacca actttgatca gtacactttt gagagagtgc
     501  gtctacaata tgtacccttg tgcggaacga caactacagg ccgggtagcc
     551  ttgtattttg acaaagattc acaagatgac ccacctagta ataggattga
     601  gctggctaat atggcccatc taaccgaaac tagtccatgg gcggaagcat
     651  ctctcaatat acctacagat aggatcaaac ggttcactaa tgatagtgct
     701  actacagaca cgaagctcat cgatcttggg cagattggcg tgggtacata
     751  tggatccaca ggtgtggctg cggcaggtga tttgttcata cactacacgg
     801  tgacattcta tgaaccacag ccgtcagccg gtcttgtatc gaccgtacgc
     851  cttattaatg gagaatcttt caccactagg acggggttga tcactatcag
     901  tgaaacatca accgcctttg gtgtcagttt caattctcct ggtacctacc
     951  tgattatcat acaattgaaa gcaacaacta tcacagacga tgcaacgtca
    1001  tccaacacag ttgtcaactc ccactttaac acattcagca ccagtaactt
    1051  cacgtctacc cgtaacatta ctattaatga gatcctctca ggaatagttg
    1101  tcacgggcac aggatttggg aatcacagtg tgaatgttgt cagggctagg
    1151  ccgataaact cggtcacatt tccttaacca tcaggcatgt gttaggggcc
    1201  tcttgaatct aaccaattca tggatactga atacgaacaa gtcaataaac
    1251  catggaacga gctatacaag gaagcg