Sequence of DPV East African cassava mosaic Cameroon virus
East African cassava mosaic Cameroon virus DNA-A
ACC No: AJ867444
Dated: 2005-04-15 | Length: 2800 | CRC: 660667102
!!NA_SEQUENCE 1.0 ID AJ867444 standard; circular genomic DNA; VRL; 2800 BP. XX AC AJ867444; XX SV AJ867444.1 XX DT 07-DEC-2004 (Rel. 82, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE East African cassava mosaic Cameroon virus DNA-A XX KW AC1 gene; AC2 gene; AC3 gene; AV1 gene; AV2 gene; coat protein; KW precoat protein; relication initiation protein; KW replicational enhancer protein; transcriptional activator. XX OS East African cassava mosaic Cameroon virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RA Winter S.; RT ; RL Submitted (06-DEC-2004) to the EMBL/GenBank/DDBJ databases. RL Winter S., Plant Virus Division, DSMZ, c/o BBA, Messeweg 11/12, 38104, RL GERMANY. XX RN [2] RA Ariyo O.A., Koerbler M., Dixon A.G.O., Atiri G.I., Winter S.; RT "Molecular variability and distribution of Cassava mosaic begomoviruses in RT Nigeria"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .2800 FT /country="Nigeria:Kano" FT /db_xref="taxon:223262" FT /mol_type="genomic DNA" FT /virion FT /organism="East African cassava mosaic Cameroon virus" FT /isolation_source="plant" FT /specific_host="Manihot esculenta" FT /segment="DNA-A" FT CDS 173. .520 FT /db_xref="UniProt/TrEMBL:Q5L4H3" FT /gene="AV2" FT /product="precoat protein" FT /protein_id="CAI30102.1" FT /translation="MWNPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYGEATRRYNNLNTRIQGAEGAELRQPIHEPCGCPYCPRHQKQNMGQQAHVS FT EAQDVQDVSKP" FT CDS 333. .1106 FT /db_xref="GOA:Q5L4H2" FT /db_xref="UniProt/TrEMBL:Q5L4H2" FT /gene="AV1" FT /product="coat protein" FT /protein_id="CAI30103.1" FT /translation="MAKRPGDIIISTPVSKVRRGLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSEVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDYRDRFQVLRKFHATVVGGPSGMKEQALVKRFFRINNHIVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1103. .1507) FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProt/TrEMBL:Q5L4H1" FT /gene="AC3" FT /product="replicational enhancer protein" FT /protein_id="CAI30104.1" FT /translation="MDLRTGEDIGALQWRNGAFIWEIPNPLYFTILNHDSMPFNMNRDI FT IDVQIRFNYNLRKALGMHKCFLNFRVWTRLHPQTWRFFKTFRTQVMKYLTNLGVISIST FT VIDAVHHVLNIVFVGTLSVSQDHAIKFNIY" FT CDS complement(1248. .1655) FT /db_xref="GOA:Q5L4H0" FT /db_xref="UniProt/TrEMBL:Q5L4H0" FT /gene="AC2" FT /product="transcriptional activator" FT /protein_id="CAI30105.1" FT /translation="MRSSSPSPSHSSPPPIKARHRQAKIRAPRRRRIDLTCGCSIYRSI FT NCHNHGFTHRGRHWCSSMEEWRLYLGDPKSPIFHNPQPRQHAVQHESRHNRCPDSVQLQ FT PEESTGDAQVFSQLPGLDSFTSSDLAFLQNL" FT CDS complement(1585. .2643) FT /db_xref="GOA:Q5L4G9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProt/TrEMBL:Q5L4G9" FT /gene="AC1" FT /product="relication initiation protein" FT /protein_id="CAI30106.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLAKEEALSQLKALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTHVPEEIEVWVSENICRPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVGPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDKNSTLKNWAIKNALFISLTEPL FT FSSTDQSQAQAS" XX SQ Sequence 2800 BP; 754 A; 550 C; 717 G; 779 T; 0 other; AJ867444 Length: 2800 April 19, 2005 08:55 Type: N Check: 4786 .. 1 accggatggc cgcgcccgaa aaaagcatgt gggcctcatg atagtccgcg 51 tccgcaaaag aaagtggtcc ccgcgcacgc atgtttgtcg gccaataaga 101 ttggcgcctt gaatgctaga tattgagttt tgactttata tacttcgtca 151 cgaagtagtg gagcgcgtca aaatgtggaa tccgttagtt aacgattttc 201 cggaaaccgt tcacggtttc cgttcgatgc ttgctgttaa atacctgtta 251 catctggaac aggaatatga tcgcggtact gtcggggcgg agtatatacg 301 tgatctaata ggggtgctac ggtgtaagag ttatggcgaa gcgaccagga 351 gatataataa tctcaacacc cgtatccaag gtgcggaggg ggctgaactt 401 cgacagccca tacacgaacc gtgtggttgc ccctactgtc cgcgtcacca 451 gaagcaaaat atgggccaac aggcccatgt atcggaagcc caagatgtac 501 aggatgtatc gaagccctga cgtccctaag ggctgtgaag gcccatgtaa 551 ggttcagtct tatgaacaga gagatgatgt gaagcatact ggtatagtcc 601 gatgtgtcag tgaagttacg cgtgggtcag gcattaccca tagagttggg 651 aagaggtttt gtgtgaagtc catatatata ttgggcaaga tctggatgga 701 tgagaatatc aagaagcaaa atcatacgaa ccatgttatg ttttttctcg 751 ttcgagatag aaggccttat gggccgagtc ctcaagattt tggacaagtg 801 ttcaacatgt ttgataatga acctacgact gcaactgtga agaatgatta 851 tagggaccgg tttcaggtgt tacgtaaatt ccatgcgact gtagttggtg 901 gaccctcagg gatgaaggaa caagctttgg taaagaggtt ttttaggatc 951 aataatcata tagtgtataa tcatcaggaa caggccaagt atgagaatca 1001 taccgagaat gcgttgttat tgtatatggc atgtacacat gcctcaaatc 1051 ctgtgtacgc tacgcttaaa atacgcatct atttctatga tgcagtgaca 1101 aattaataaa tattaaattt gattgcatga tcttgggata cagatagggt 1151 gcccacaaaa acgatattca atacatgatg cactgcatct attacagttg 1201 aaatcgaaat aacacctaaa ttagtgagat atttcatgac ttgtgtccta 1251 aaggttttga agaaacgcca agtctgagga tgtaaacgag tccagacccg 1301 gaagttgaga aaacacttgt gcatccccag tgctttcctc aggttgtagt 1351 tgaaccgaat ctggacatct attatgtcgc gattcatgtt gaacggcatg 1401 ctgtcgtggt tgaggattgt gaaatatagg ggatttggga tctcccagat 1451 aaaggcgcca ttcctccatt gaagagcacc aatgtcttcc cctgtgcgta 1501 aatccatggt tgtgacaatt aatgctgcga tagatggaac agccacaagt 1551 taggtcgatg cgtcgacgtc taggtgctct gattttagct tgcctgtgcc 1601 tggctttgat cggtggagga gaagagtggc tcggtgaggg agatgaagag 1651 cgcattcttg atcgcccaat tcttgagagt ggaattcttg tcctcgtcta 1701 ggtattcttt ataggacgaa ttgggacccg gattgcataa gaagatggtg 1751 ggaatcccac ctttaatttg aatgggcttt ccgtattttg tgtttgattg 1801 ccaatctcgt tgggccccca tgaactcttt gaaatgcttt agataatgcg 1851 ggcctacgtc gtcaatgacg ttgtaccatg cgtcgtttga atatatcttg 1901 ggagacagat ccaggtgtcc acatagatag ttatgtgggc ccagagatcg 1951 ggcccacatc gtcttcccgg ttcggctatc accttcgaga acaatactga 2001 tcggtctcca tggccgcgca gcgggacggc atatattttc ggatacccat 2051 acttctattt cctctgggac gtgcgtaaat gaggatgata agaacggact 2101 aacgtaagtt tgtggcggag cctggaagat gcgatccgcg ttagcagata 2151 tgttatggaa ctgtaaaaaa aaggactttg gatccttttc tttgataatt 2201 tgaagagctt ctgatttaga agaagcattc aacgcttctg catatacctg 2251 tgctaaatgc tggccctccc ccctggcact tctggcatcg acctggaaaa 2301 ttccatcgtc aagaaattcc cctccctttt caatgtaagc cttgacatcg 2351 gacgatgatt tagctccctg aatgttcgga tggaaatgtg ttgatcggga 2401 tggggaaatg agatcgaaga atctggggtt ggtacattgg aacttgcctt 2451 cgaattggat gagaacatgg agatgaggca ccccatcctg atgtagttct 2501 ctgcaaaccc taatgaattt gatattcgtc gggtaagaaa gggctttcaa 2551 ttgggaaagg gcctcttcct ttgctaagga gcatcgggga taggttatga 2601 aataattttt ggcatttatt tgaaaacgac cggctctcgg catatttgct 2651 gtcgttttgt atcgggggac actcaaaact ccaggggaac ggtggaatgg 2701 ggggcattat atatgatgtc ccccaatggc atatgtgtaa ataggtagac 2751 ttccattcaa aatttgaatt gtgaatattg gcggccatcc gattaatatt