Sequence of DPV Dolichos yellow mosaic virus

Dolichos yellow mosaic virus complete DNA-A segment, strain Mysore

ACC No: AJ968370

Dated: 2006-03-31 | Length: 2760 | CRC: 1073047200

                
ID   AJ968370   standard; circular genomic DNA; VRL; 2760 BP.
XX
AC   AJ968370;
XX
SV   AJ968370.1
XX
DT   21-MAR-2006 (Rel. 87, Created)
DT   31-MAR-2006 (Rel. 87, Last updated, Version 2)
XX
DE   Dolichos yellow mosaic virus complete DNA-A segment, strain Mysore
XX
KW   AC1 gene; AC2 gene; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene;
KW   AV2 protein; coat protein; replication associated protein;
KW   replication enhancer protein; transcriptional activator protein.
XX
OS   Dolichos yellow mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2760
RA   Maruthi M.N.;
RT   ;
RL   Submitted (27-APR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Maruthi M.N., Natural Resources Institute, University of Greenwich, Central
RL   Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM.
XX
RN   [2]
RA   Maruthi M.N., Rekha A.R., Govindappa M.R., Colvin J., Muniyappa V.;
RT   "A distinct begomovirus causes Indian dolichos yellow mosaic disease";
RL   Plant Pathol. 55(2):290-290(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2760
FT                   /organism="Dolichos yellow mosaic virus"
FT                   /segment="DNA-A"
FT                   /strain="Mysore"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Mysore, Karnataka State"
FT                   /isolation_source="Dolichos (Lablab purpureus)"
FT                   /virion
FT                   /db_xref="taxon:333968"
FT   CDS             123. .410
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="CAI91269.1"
FT                   /translation="MWDPLVNDFPDTLHGLRCMLAVKFVQELLETYPRDSNGRILLEEL
FT                   ISVLRCKRYAKAQFRYGVFYSKTQCTSKAQLRQPICNTDVSSSNSEHQSS"
FT   CDS             283. .1056
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="CAI91270.1"
FT                   /translation="MPKRSFDMAFSTPRPSVRRRLNFDSPSATPMSVRRIPSTSRRRQW
FT                   TNRPMNRKPRLYRMYRSRDVPYGCEGPCKVQSFEQRHDISHTGKVMCVSDVTRGNNLTH
FT                   RVGKRFCVKSVYIIGKIWMDENIKTKNHTNTVMFWLVRDRRPFGTPMDLGQVFNMYDNE
FT                   PSTATIKNDLRDRYQVLRKFDSTVTGGQYASREANVIKRFWRVNNYVVYNHQEAAKYEN
FT                   HTENALLLYMACTHASNPVYATLKIRIYFYDSISN"
FT   CDS             complement(1072. .1482)
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /protein_id="CAI91271.1"
FT                   /translation="MTDSRTGESITAAQLQSGVFIWELKNPLSFKILEHHEGFLFDPNQ
FT                   HRTKIRIMFNHGLKKALGIHKAFLDFVIYHRLTPQSGRILNVFRNFLFRFLNNLGIISM
FT                   NNVLRGCEYVLYDVFQRIEAVDFEYNVQYKLY"
FT   CDS             complement(1202. .1630)
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /protein_id="CAI91272.1"
FT                   /translation="MRSSSPSNSHCSLPSIKAQHRQAKKRKTIRRKRIDLTCGCSYYLN
FT                   INCRNDGFTHRGIHHCSSTTEWRVYLGAKESPVFQNPGTSRGVPVRSEPTQNQDPHNVQ
FT                   PRVEESVGDTQGILGLCDLPSIDSAIWADLECIQELPF"
FT   CDS             complement(1536. .2633)
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /protein_id="CAI91273.1"
FT                   /translation="MRAPGFRISARNIFLTYPKCSLSKEEALEQLCRIECPSDKLFIRV
FT                   AQEAHQDGTMHLHALVQFKGKAQFRNARHFDLTHPHSTQIFHGNVQGAKSSSDVKSYIT
FT                   KDGDYVDWGTFQIDGRSARGGRQTADDAVASALNSGTVQGAMNIIKELLPHNYVFQYHN
FT                   LRSNLERIFAPPITVYTSFYKPGDFSQVPSVMTDWAENNVVDPSWRSDPAARPRRPMSI
FT                   VVEGATRTGKTLWARSLGAHNYMCGHLDLSPKIFSNDAWYNVIDDVDPHYLKHFKEFMG
FT                   AQMDWQSNIKYGKPTQIKGGIPTIFLCNPGPRSSYKEFLDEEQNESLKEWAYKNAVFVT
FT                   LEQPLFSTEHQGTASTGEETQNDSA"
FT   CDS             complement(2234. .2479)
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /protein_id="CAI91274.1"
FT                   /translation="MGLCISMPSSSSRVRPSSEMPDISTLPILIAHRFSMEMSREQRAH
FT                   LMSNPTSPRTVTTSTGEHFRSTDDLLEEVVRQLTML"
XX
SQ   Sequence 2760 BP; 731 A; 617 C; 624 G; 788 T; 0 other;

aj968370 Length: 2760  31-MAR-2006  Type: N  Check: 141  ..

       1  accggatggc cgcccgcccg ccacgtgtct caatcctgac gctccgtgga
      51  gtcttattta gcgcacccgg atttcaaagt tcactataaa acttggtcga
     101  caagttttac acatctatct aaatgtggga cccattggta aatgattttc
     151  ctgacacact gcatggattg cggtgtatgt tagctgtgaa atttgtgcag
     201  gaattattgg agacctatcc gcgtgactcg aatggacgca tcctattgga
     251  ggagctaatc tcggtgttgc gttgtaagcg ttatgccaaa gcgcagtttc
     301  gatatggcgt tttctactcc aagacccagt gtacgtcgaa ggctcaactt
     351  cgacagccca tctgcaacac cgatgtcagt tcgtcgaatt ccgagcacca
     401  gtcgtcgtag acaatggacc aatcgtccca tgaatcgcaa accgcgtcta
     451  tatcgtatgt atcgctcacg cgatgtacca tatgggtgcg agggaccatg
     501  taaagttcaa tcatttgaac aacggcatga tatcagtcat actggtaagg
     551  tcatgtgtgt ttccgatgtc actagaggaa acaaccttac tcatcgtgtt
     601  ggtaaacgat tttgtgttaa atctgtttac attattggca aaatttggat
     651  ggacgaaaac atcaagacaa aaaaccatac aaacacagtc atgttttggc
     701  tagttcgtga tcgacgacct tttggaacgc ctatggactt gggtcaagtg
     751  ttcaacatgt atgataatga accctcgacc gctactatca aaaacgatct
     801  acgtgatcgt taccaagtct tgcgtaagtt cgattcaact gtcaccggag
     851  gtcaatatgc gtcgagggaa gcaaatgtca tcaagagatt ttggcgtgtc
     901  aacaattatg tggtctataa ccaccaagaa gctgctaagt atgagaatca
     951  tacggaaaac gcattattat tgtatatggc atgtactcat gcctcaaatc
    1001  cagtgtatgc aacattaaag atcaggatct atttctatga ttcgatctca
    1051  aattaataaa atctagtttt attaatatag cttatattgt acattatatt
    1101  cgaaatcgac tgcttcgatt ctttgaaata catcatacaa tacatactcg
    1151  caaccgcgta atacattgtt catcgaaata attcctaaat tatttaaaaa
    1201  tctaaaaagg aagttcctga atacattcaa gatccgccca gattgcggag
    1251  tcaatcgatg gtaaatcaca aagtccaaga atgccttgtg tatccccaac
    1301  gctttcttca acccgtggtt gaacattatg cggatcttgg ttctgtgttg
    1351  gttcggatcg aacaggaacc cctcgtgatg ttccaggatt ttgaaagaca
    1401  ggggattctt tagctcccag ataaacacgc cactctgtag ttgagctgca
    1451  gtgatggatt cccctgtgcg tgaatccgtc attccggcag ttgatgttta
    1501  ggtaatacga acagccacag gtcagatcga ttcgcttacg ccgaatcgtt
    1551  ttgcgtttct tcgcctgtcg atgctgtgcc ttgatgctcg gtagagaaca
    1601  atggctgttc gagggtgacg aagaccgcat ttttgtaagc ccactccttc
    1651  aatgattcgt tctgttcctc gtcaaggaac tctttatagg aggaacgtgg
    1701  tcctggattg caaagaaaga tggtgggtat cccaccttta atctgagtgg
    1751  gcttaccgta tttgatattg ctttgccagt ccatctgggc ccccataaac
    1801  tctttaaaat gctttaaata atgcggatca acgtcatcaa tgacgttata
    1851  ccaagcatcg ttggaaaaga tctttggact aagatccaga tgtccgcaca
    1901  tgtaattatg ggcccccaat gatcgggccc acaacgtctt ccccgttctt
    1951  gttgctcctt caacaacgat gctcatcggt ctcctcggcc gcgcagcggg
    2001  gtcgctcctc cacgacggat caacaacgtt attttcagcc cagtctgtca
    2051  taacagacgg cacttgacta aagtcgcctg gcttgtaaaa cgatgtgtaa
    2101  actgtaatgg gaggagcgaa tatgcgttca aggttagatc tcagattgtg
    2151  gtactggaac acgtaattgt gtggaagtaa ttctttaata atgttcatag
    2201  caccttgaac cgtaccggaa tttaacgccg atgctacagc atcgtcagct
    2251  gtctgacgac ctcctctagc agatcgtccg tcgatctgaa atgttcccca
    2301  gtcgacgtag tcaccgtcct tggtgatgta ggatttgaca tcagatgagc
    2351  tctttgctcc ctggacattt ccatggaaaa tctgtgtgct atgaggatgg
    2401  gtaaggtcga aatgtctggc atttcggaac tgggccttac ccttgaactg
    2451  gacgagggca tggagatgca tagtcccatc ttgatgtgct tcttgtgcga
    2501  ctctgatgaa caatttatcc gacggacact cgatgcgaca gagctgttcg
    2551  agagcttctt ctttcgacaa cgaacatttg gggtaggtca gaaatatatt
    2601  tctggcagaa atgcggaagc ctggagctct catcttttaa atgagactag
    2651  tgccacgtca tcggtgtatc ggtgtcgctt caaagttccc agaattggtg
    2701  tcattggtgt cgcatatata ggggtctcta ataaggggta cggccatccg
    2751  ctataatatt