Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp2 gene (partial), TGBp3 gene and CP gene (partial), genomic RNA, isolate Mu 04.8
ACC No: AM040183
Dated: 2005-10-20 | Length: 982 | CRC: 715312319
!!NA_SEQUENCE 1.0 ID AM040183 standard; genomic RNA; VRL; 982 BP. XX AC AM040183; XX SV AM040183.1 XX DT 20-OCT-2005 (Rel. 85, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp2 gene (partial), TGBp3 gene and CP gene (partial), DE genomic RNA, isolate Mu 04.8 XX KW coat protein; CP gene; TGBp2 gene; TGBp3 gene; triple gene block protein 2; KW triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-982 RA Pagan I.; RT ; RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .982 FT /country="Spain:Murcia" FT /db_xref="taxon:112229" FT /mol_type="genomic RNA" FT /virion FT /organism="Pepino mosaic virus" FT /isolate="Mu 04.8" FT /specific_host="Lycopersicon esculentum" FT CDS <1. .354 FT /codon_start=1 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /protein_id="CAJ04663.1" FT /translation="RADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRLPFGGQY FT QDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQHSCYNTH FT SATNNTQPLSGHH" FT CDS 206. .460 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /protein_id="CAJ04674.1" FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPQLEN" FT CDS 499. .>982 FT /gene="CP" FT /product="coat protein" FT /protein_id="CAJ04678.1" FT /translation="MPDTTPVAFTSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY FT VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN FT PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAA" XX SQ Sequence 982 BP; 284 A; 264 C; 167 G; 267 T; 0 other; AM040183 Length: 982 November 1, 2005 08:46 Type: N Check: 1497 .. 1 agagctgacc tcactgacac atacaaaatc attgccattg ctttcttgtt 51 gtcagcttgc atttacttcc aaaatagcca ctaccaacct gttgctggag 101 acaacttgca ccgtttgcct tttggtggcc aatatcaaga cggcaccaaa 151 aagatatctt attttccaca acagcagtca tactttcatt ctggaaacaa 201 attaaatgtc ctcatactta tcttcattct cacattgggt attgtcctca 251 ccaataaatt tagttttagc tttagtcgta ctactcacca gcattcttgc 301 tataacacac attcagcaac caacaataca caaccattgt caggtcacca 351 ttgacggtgc tgcaatagtc ataacaaatt gtgagaacac accagaagtg 401 cttaaagcaa tcaacttctc cccttggaac gggttaagtt ttcctcaatt 451 ggaaaattaa tattgagtgc tcacataatt caacctcaac aaacaatcat 501 gcctgacaca acacctgttg ctttcacttc aagtgcacca cccacagcca 551 aagatgctgg tgccaaagct ccttctgact tctcaaatcc caatacagct 601 cctagtctca gtgatttgaa gaaagtcaag tatgtctcca ccgtgacctc 651 cgtggccaca ccagctgaaa ttgaagccct aggcaaaatc ttcactgcca 701 tgggccttgc cgccaatgag actggtccgg ccatgtggga tctagctcgt 751 gcatatgctg atgtgcagag ttctaaatcg gcacagctga ttggagctac 801 cccttccaac cctgcactat cacgccgagc ccttgctgct cagtttgatc 851 gaatcaatat aacccccagg caattttgca tgtactttgc caaagttgtt 901 tggaacatac ttctcgacag caacattcca ccagcaaatt gggccaaact 951 tggttaccaa gaagatacaa aatttgctgc tg