Sequence of DPV Pepino mosaic virus

Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.2 TGB, isolate 1

ACC No: AM041974

Dated: 2005-10-20 | Length: 1268 | CRC: 863937242

                !!NA_SEQUENCE 1.0
ID   AM041974   standard; genomic RNA; VRL; 1268 BP.
XX
AC   AM041974;
XX
SV   AM041974.1
XX
DT   20-OCT-2005 (Rel. 85, Created)
DT   20-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.2
DE   TGB, isolate 1
XX
KW   TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1;
KW   triple gene block protein 2; triple gene block protein 3.
XX
OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-1268
RA   Pagan I.;
RT   ;
RL   Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL   Madrid, 28040, SPAIN.
XX
RN   [2]
RA   Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA   Jorda C., Garcia-Arenal F.;
RT   "Genetic structure of the population of Pepino mosaic virus infecting
RT   tomato crops in Spain";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1268
FT                   /country="Spain:Murcia"
FT                   /db_xref="taxon:112229"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Pepino mosaic virus"
FT                   /specific_host="Lycopersicon esculentum"
FT                   /isolate="1"
FT                   /clone="Mu 04.2 TGB"
FT   CDS             50. .754
FT                   /gene="TGBp1"
FT                   /product="triple gene block protein 1"
FT                   /protein_id="CAJ14316.1"
FT                   /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA
FT                   YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC
FT                   TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI
FT                   SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK
FT                   LTIGELNARSNS"
FT   CDS             735. .1106
FT                   /gene="TGBp2"
FT                   /product="triple gene block protein 2"
FT                   /protein_id="CAJ14317.1"
FT                   /translation="MPGLTPKADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT                   PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT                   SCYNTHSATNNTQPLSGHH"
FT   CDS             958. .1218
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAJ14318.1"
FT                   /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT                   QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFENQY"
XX
SQ   Sequence 1268 BP; 392 A; 298 C; 206 G; 372 T; 0 other;

AM041974  Length: 1268  November 1, 2005 08:47  Type: N  Check: 4462  ..

       1  agccctccaa aagcaacaca ttgaggggtt aagttttccc cagttcgaaa
      51  tggaaagatc aactctgatt aatttacttc aattgcacca cttcgagcca
     101  aaactcagtg ttgaaggaat catagttgtg cacggaattg caggcactgg
     151  gaaaaccact ttacttagga ctttattttc tgcttaccct agcttagtta
     201  taggttcacc taggccttgc tatttagata aacaaaacaa aatttcacaa
     251  gtttgcttat cttgctttcc caatacccat tgtgatattg tcgatgagta
     301  tcatttgcta gaaagttttc cagaaccaaa attggctatc tttggtgacc
     351  cctgtcaatg cacatacatt gagagactta gagtcccaca ttacacttcc
     401  ttcagaactc atagatttgg aaagtcaact gctgagattt tgaacaaact
     451  gtttgacctt aatatagttt cagttaagaa agaagacgac atcgttgaat
     501  tctttaaccc ttttgaagtt gaccccactg agcacatctc tgcctctgaa
     551  gaagaagtct tggactttgt ttctgaccaa gtggtgacca ctagctcaga
     601  ggaactagca ggacttgagt ttgcagaaac aactttctac tgcacaacat
     651  tggccgcagc tgttgctgaa aatcctgcta agacttttat ctctctgact
     701  agacacaccc acaaactcac cattggggaa ctaaatgcca ggtctaactc
     751  ctaaagctga cctcactgac acatacaaaa tcattgccat tgctttcttg
     801  ttgtcagctt gcatttactt ccaaaatagc cactaccaac ctgttgctgg
     851  agacaactta caccgtttgc cttttggtgg ccaatatcaa gacggcacca
     901  aaaagatatc ttattttcca caacagcagt catactttca ttctggaaac
     951  aaactaaatg tcctcatact tatcttcatt ctcacattgg gtattgtcct
    1001  caccaataaa tttagtttta gctttagtcg tactactcac cagcattctt
    1051  gctataacac acattcagca accaacaata cacaaccatt gtcaggtcac
    1101  cattgacggt gctgcaatag tcataacaaa ttgtgagaac acaccagaag
    1151  tgcttaaagc aatcaacttc tccccttgga acgggttaag ttttcctaaa
    1201  tttgaaaatc aatattgagt gttcacaaaa atcaattcaa taaacaatca
    1251  tgcctgacac aacacctg