Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.2 TGB, isolate 1
ACC No: AM041974
Dated: 2005-10-20 | Length: 1268 | CRC: 863937242
!!NA_SEQUENCE 1.0 ID AM041974 standard; genomic RNA; VRL; 1268 BP. XX AC AM041974; XX SV AM041974.1 XX DT 20-OCT-2005 (Rel. 85, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.2 DE TGB, isolate 1 XX KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1; KW triple gene block protein 2; triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-1268 RA Pagan I.; RT ; RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .1268 FT /country="Spain:Murcia" FT /db_xref="taxon:112229" FT /mol_type="genomic RNA" FT /virion FT /organism="Pepino mosaic virus" FT /specific_host="Lycopersicon esculentum" FT /isolate="1" FT /clone="Mu 04.2 TGB" FT CDS 50. .754 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /protein_id="CAJ14316.1" FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK FT LTIGELNARSNS" FT CDS 735. .1106 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /protein_id="CAJ14317.1" FT /translation="MPGLTPKADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH FT SCYNTHSATNNTQPLSGHH" FT CDS 958. .1218 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /protein_id="CAJ14318.1" FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC FT QVTIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFENQY" XX SQ Sequence 1268 BP; 392 A; 298 C; 206 G; 372 T; 0 other; AM041974 Length: 1268 November 1, 2005 08:47 Type: N Check: 4462 .. 1 agccctccaa aagcaacaca ttgaggggtt aagttttccc cagttcgaaa 51 tggaaagatc aactctgatt aatttacttc aattgcacca cttcgagcca 101 aaactcagtg ttgaaggaat catagttgtg cacggaattg caggcactgg 151 gaaaaccact ttacttagga ctttattttc tgcttaccct agcttagtta 201 taggttcacc taggccttgc tatttagata aacaaaacaa aatttcacaa 251 gtttgcttat cttgctttcc caatacccat tgtgatattg tcgatgagta 301 tcatttgcta gaaagttttc cagaaccaaa attggctatc tttggtgacc 351 cctgtcaatg cacatacatt gagagactta gagtcccaca ttacacttcc 401 ttcagaactc atagatttgg aaagtcaact gctgagattt tgaacaaact 451 gtttgacctt aatatagttt cagttaagaa agaagacgac atcgttgaat 501 tctttaaccc ttttgaagtt gaccccactg agcacatctc tgcctctgaa 551 gaagaagtct tggactttgt ttctgaccaa gtggtgacca ctagctcaga 601 ggaactagca ggacttgagt ttgcagaaac aactttctac tgcacaacat 651 tggccgcagc tgttgctgaa aatcctgcta agacttttat ctctctgact 701 agacacaccc acaaactcac cattggggaa ctaaatgcca ggtctaactc 751 ctaaagctga cctcactgac acatacaaaa tcattgccat tgctttcttg 801 ttgtcagctt gcatttactt ccaaaatagc cactaccaac ctgttgctgg 851 agacaactta caccgtttgc cttttggtgg ccaatatcaa gacggcacca 901 aaaagatatc ttattttcca caacagcagt catactttca ttctggaaac 951 aaactaaatg tcctcatact tatcttcatt ctcacattgg gtattgtcct 1001 caccaataaa tttagtttta gctttagtcg tactactcac cagcattctt 1051 gctataacac acattcagca accaacaata cacaaccatt gtcaggtcac 1101 cattgacggt gctgcaatag tcataacaaa ttgtgagaac acaccagaag 1151 tgcttaaagc aatcaacttc tccccttgga acgggttaag ttttcctaaa 1201 tttgaaaatc aatattgagt gttcacaaaa atcaattcaa taaacaatca 1251 tgcctgacac aacacctg