Sequence of DPV Pepino mosaic virus
Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.11 TGB, isolate 1
ACC No: AM041983
Dated: 2005-10-20 | Length: 1267 | CRC: 621715659
!!NA_SEQUENCE 1.0 ID AM041983 standard; genomic RNA; VRL; 1267 BP. XX AC AM041983; XX SV AM041983.1 XX DT 20-OCT-2005 (Rel. 85, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.11 DE TGB, isolate 1 XX KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1; KW triple gene block protein 2; triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-1267 RA Pagan I.; RT ; RL Submitted (20-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .1267 FT /country="Spain:Murcia" FT /db_xref="taxon:112229" FT /mol_type="genomic RNA" FT /virion FT /organism="Pepino mosaic virus" FT /specific_host="Lycopersicon esculentum" FT /isolate="1" FT /clone="Mu 04.11 TGB" FT CDS 49. .753 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /protein_id="CAJ14343.1" FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFLEPKLAIFGDPCQC FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENSAKTFISLTRHTHK FT LTIGELNARSNS" FT CDS 734. .1105 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /protein_id="CAJ14344.1" FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH FT SCYNTHSATNNTQPMSGHH" FT CDS 957. .1211 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /protein_id="CAJ14345.1" FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNQC FT QVIIDGAAIFITNCENTPEVLKAINFSPWNGLSFPKFEN" XX SQ Sequence 1267 BP; 392 A; 293 C; 206 G; 376 T; 0 other; AM041983 Length: 1267 November 1, 2005 08:47 Type: N Check: 9324 .. 1 agccctccaa aagcaacaca ttgaggggtt aagttttccc agttcgaaat 51 ggaaagatca actctgatta atttacttca attgcaccac ttcgagccaa 101 aactcagtgt tgaaggaatc atagttgtgc acggaattgc aggcactggg 151 aaaaccactt tacttaggac tttattttct gcttacccta gcttagttat 201 aggttcacct aggccttgct atttagataa acaaaacaaa atttcacaag 251 tttgcttatc ttgctttccc aatacccatt gtgatattgt cgatgagtat 301 catttgctag aaagttttct agaaccaaaa ttggctatct ttggtgaccc 351 ctgtcaatgc acatacattg agagacttag agtcccacat tacacttcct 401 tcagaactca tagatttgga aagtcaactg ctgagatttt gaacaaactg 451 tttgacctta atatagtctc agttaagaaa gaagacgaca tagttgaatt 501 ctttaaccct tttgaagttg accccactga gcatatctct gcctctgaag 551 aagaagtctt ggactttgtt tctgaccaag tggtgaccac tagctcagag 601 gaactagcag gacttgagtt tgcagaaaca actttctact gcacaacatt 651 ggccgcagct gttgctgaaa attctgctaa gactttcatc tctctgacta 701 gacacaccca caaactcacc attggggaac taaatgccag gtctaactcc 751 tagagctgac ctcactgaca catacaaaat tattgccatt gctttcttgt 801 tgtcagcttg catttacttc caaaatagcc actaccaacc tgttgctgga 851 gacaacttgc accgtttgcc ttttggtggc caatatcaag acggcaccaa 901 aaagatatcc tattttccac aacaacagtc atactttcat tctggaaaca 951 aattaaatgt cctcatactt atcttcattc tcacattggg tattgtcctc 1001 accaataaat ttagttttag ctttagtcgt actactcacc agcattcttg 1051 ctataacaca cattcagcaa ccaacaatac acaaccaatg tcaggtcatc 1101 attgacggtg ctgcaatatt cataacaaat tgtgagaaca caccagaagt 1151 gcttaaagca atcaacttct ccccttggaa cgggttaagt tttcctaaat 1201 ttgaaaatta atattgagtg ttcacaaaat caacttcaat aaacaatcat 1251 gcctgacaca acacctg