Sequence of DPV Pepino mosaic virus
Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and CP gene for coat protein, genomic RNA, clone Mu 03.6, isolate 2
ACC No: AM113818
Dated: 2005-12-13 | Length: 787 | CRC: -115489544
ID AM113818 standard; genomic RNA; VRL; 787 BP. XX AC AM113818; XX SV AM113818.1 XX DT 13-DEC-2005 (Rel. 86, Created) DT 13-DEC-2005 (Rel. 86, Last updated, Version 1) XX DE Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and DE CP gene for coat protein, genomic RNA, clone Mu 03.6, isolate 2 XX KW coat protein; CP gene; TGBp3 gene; triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-787 RA Pagan I.; RT ; RL Submitted (13-JUL-2005) to the EMBL/GenBank/DDBJ databases. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .787 FT /country="Spain:Murcia" FT /db_xref="taxon:112229" FT /mol_type="genomic RNA" FT /virion FT /organism="Pepino mosaic virus" FT /clone="Mu 03.6" FT /isolate="2" FT /isolation_source="Tomato" FT CDS <1. .35 FT /codon_start=3 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /protein_id="CAJ34742.1" FT /translation="NGLSFPKFEN" FT CDS 74. .787 FT /gene="CP" FT /product="coat protein" FT /protein_id="CAJ34743.1" FT /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY FT VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN FT PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD FT FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM FT GGANTMYAIDAPPEL" XX SQ Sequence 787 BP; 221 A; 213 C; 161 G; 192 T; 0 other; am113818 Length: 787 13-DEC-2005 Type: N Check: 3074 .. 1 ggaacgggtt aagttttcct aaatttgaaa attaatattg agtgttcaca 51 aaaatcaact tcaataaaca atcatgcctg acacaacacc tgttgctgct 101 acttcaagtg caccacccac agccaaagat gctggtgcca aagctccttc 151 tgacttctca aatcccaata cagctcctag tctcagtgat ttgaagaaag 201 tcaagtatgt ctccaccgtg acctccgtgg ccacaccagc tgaaattgaa 251 gccctaggca aaatcttcac cgctatgggc cttgccgcca atgagactgg 301 tccggccatg tgggatctgg ctcgtgcata tgctgatgtg cagagttcta 351 aatcggcaca gctgattgga gctacccctt ccaaccctgc actatcacgc 401 cgagcccttg ctgctcagtt tgatcgaatc aatataaccc ccaggcaatt 451 ttgcatgtac tttgccaaag ttgtttggaa catacttctc gacagcaaca 501 ttccaccagc aaattgggcc aaacttggtt accaagaaga tacaaaattt 551 gctgcatttg atttcttcga tggagtcacc aaccctgcca gcctgcagcc 601 tgctgatggt cttatcaggc agccaaatga gaaagaactc gctgctcact 651 ccgtagctaa gtacggcgcc ttggctaggc aaaagatctc cacaggtaat 701 tatattacca cacttggaga agtcacacgt ggacacatgg gaggagctaa 751 caccatgtac gcgatagacg caccccctga actttaa