Sequence of DPV Cymbidium mosaic virus
Cymbidium mosaic virus partial CP gene for coat protein, isolate FRA10, genomic RNA
ACC No: AM236027
Dated: 2007-03-24 | Length: 645 | CRC: -53481862
ID AM236027; SV 1; linear; genomic RNA; STD; VRL; 645 BP. XX AC AM236027; XX DT 01-APR-2006 (Rel. 87, Created) DT 24-MAR-2007 (Rel. 91, Last updated, Version 2) XX DE Cymbidium mosaic virus partial CP gene for coat protein, isolate FRA10, DE genomic RNA XX KW coat protein; CP gene. XX OS Cymbidium mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-645 RA Grisoni M.; RT ; RL Submitted (10-MAR-2006) to the EMBL/GenBank/DDBJ databases. RL Grisoni M., UMR 53-PVBMT, Cirad, 97410, 97410 Saint Pierre, REUNION. XX RN [2] RA Moles M., Delatte H., Farreyrol K., Grisoni M.; RT "Evidence that Cymbidium mosaic virus (CymMV) isolates divide into two RT subgroups based on nucleotide diversity of coat protein and replicase RT genes"; RL Arch. Virol. 152(4):705-715(2007). XX FH Key Location/Qualifiers FH FT source 1. .645 FT /organism="Cymbidium mosaic virus" FT /specific_host="Vanilla bahiana" FT /isolate="FRA10" FT /mol_type="genomic RNA" FT /country="France:Cherbourg" FT /virion FT /db_xref="taxon:12178" FT CDS 1. .>645 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q1XE49" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q1XE49" FT /protein_id="CAJ84634.1" FT /translation="MGEPTPTPAATYSAADPTSSPKLADLTAIKYSPVTSSIATPEEIK FT AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGVCPTKPDVRRAALAAQIF FT VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP FT AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLY" XX SQ Sequence 645 BP; 127 A; 233 C; 152 G; 133 T; 0 other; am236027 Length: 645 24-MAR-2007 Type: N Check: 9324 .. 1 atgggagagc ccactccgac tccagctgcc acctactccg ctgctgaccc 51 cacttcatca cccaagctgg ccgacctcac cgccatcaag tactcaccgg 101 tcacctcatc aatcgccaca cccgaagaga tcaaggccat aacccagctg 151 tgggttaaca accttggcct ccccgccgac accgtaggta ccgcagccat 201 tgatttggct cgtgcttacg ctgacgtcgg ggcttccaag tctgctaccc 251 tgcttggtgt ctgccccacg aagccagacg tccgccgcgc tgctcttgcc 301 gcgcagatct tcgtggccaa tgtcactccc cgccagtttt gcgcttacta 351 cgcaaaagtg gtgtggaatc tgatgctggc caccaatgat ccgcccgcca 401 attgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgat 451 ttcttcgatg ccgtcgactc cacagccgct ttggaacccg ctgaatggca 501 acgtcgccct accgaccgtg agcgtgccgc ccactcaatc gggaagtacg 551 gtgctcttgc ccgccagcgc atccagaacg gcaacctcat caccaacatt 601 gccgaggtta ccaagggcca tcttggctcc actaacaccc tctat