Sequence of DPV Sri Lankan cassava mosaic virus
Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D5B (SLCMV-[Ker4]B)
ACC No: AM238430
Dated: 2007-02-27 | Length: 1445 | CRC: -91961496
ID AM238430; SV 1; circular; other DNA; STD; VRL; 1445 BP.
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AC AM238430;
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DT 31-MAR-2006 (Rel. 87, Created)
DT 27-FEB-2007 (Rel. 90, Last updated, Version 2)
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DE Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D5B
DE (SLCMV-[Ker4]B)
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KW recombinant defective DNA.
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OS Sri Lankan cassava mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1445
RA Patil B.L.;
RT ;
RL Submitted (23-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Patil B.L., Plant Molecular Biology, University of Delhi South campus,
RL Dept. of Plant Molecular Biology, University of Delhi, New Delhi-21,
RL 110021, INDIA.
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RN [2]
RA Patil B.L., Briddon R.W., Rothenstein D., Dasgupta I., Stanley J.,
RA Jeske H.;
RT "Deletion events between DNA-A and DNA-B generate defective molecules in
RT Indian cassava-infecting Geminiviruses. (communicated to Journal of General
RT Virology)";
RL Unpublished.
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RN [3]
RA Patil B.L., Dutt N., Briddon R.W., Bull S.E., Rothenstein D., Borah B.K.,
RA Dasgupta I., Stanley J., Jeske H.;
RT "Deletion and recombination events between the DNA-A and DNA-B components
RT of Indian cassava-infecting geminiviruses generate defective molecules in
RT Nicotiana benthamiana";
RL Virus Res. 124(1-2):59-67(2007).
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FH Key Location/Qualifiers
FH
FT source 1. .1445
FT /organism="Sri Lankan cassava mosaic virus"
FT /specific_host="Cassava"
FT /lab_host="Nicotiana benthamiana"
FT /mol_type="other DNA"
FT /country="Sri Lanka:Colombo"
FT /clone="D5B"
FT /virion
FT /note="recombinant DNA from SLCMV-[Ker4]B"
FT /db_xref="taxon:161378"
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SQ Sequence 1445 BP; 398 A; 283 C; 323 G; 439 T; 2 other;
am238430 Length: 1445 27-FEB-2007 Type: N Check: 1228 ..
1 accggatggc cacgcccccc tctttatggt ggcccccccc acgttgggat
51 gtccccctct cacgacgctc actagaaggc taacatgttg gtggccccac
101 gatgttgttt ataacgtcta taactgagac tcgaagcatg tgttgccacg
151 tatgcgttat ttgtacttcg tctcgaagtt atgagtgagg gccctgtatg
201 tggatatcta accgcatatt gtgtgaatgg attaaacgtg gcaagatcat
251 gccgtttatt gggaactata ttattatgct gttgtctata tatataggta
301 tgtcgtgttt cggagatctg cacatggtgg tgtcaggatg agaagaggtg
351 cctatacccc ccgttctact ccattttctc gtgaccggag atcgtataat
401 gccggtaagg gtaaatcatt tcgttcttac cgtcgtcgtg gacctgttcg
451 tccattagcc cgtcggaacc tgtttggtga tgaccatgca cgtgcattca
501 cgtataagac cttatcggag gatcaatttg gaccggattt taccatacat
551 aataataatt atagtgaccc ttgaggagcg atattttgtt atccagaaga
601 gatggaaaac tcaacttgac gtcggttgag tcattggtta actcatattc
651 aactctttcg gaacgaagat acgctgcatt gctactacta ttctccattg
701 gccccgcagg ggaaatgctt aaaaattaag cccagtgcag aagaaataat
751 ttaatgtgca taaagcaaag cccagagctt aataaatagc gaaaggcata
801 tatattatat tattgatgaa aggttacaag agcatccacg tggcagtgga
851 ttaaatacgt gaaaagctct acaatatatt tataaaaagt tgtgacgacg
901 tcatcttcaa cgaatggaac cggaaaaccc taatgcatct ctgatgactc
951 tggttaagcc ctctagtagt atgtcacatg tttccggtgt catgtggtag
1001 taatttttga gtttggtaac cctaatcttc nattttgnaa ggccatatgt
1051 atggctctat ctatttctgg taacagatcc atatcttgtt cttcgaaatg
1101 gaggtaatat gaatttgaac cagtcgcgat gtaaggttga tgtctgctag
1151 tagttttgaa ttcgacccag atcgaattct tcataatgcg actggatagt
1201 cgcacacatt tcttgctgtg ttgcaagaag gaataggtag tttgggaaga
1251 cataggaaga atgagaatga tgttgggttt aagtgggatt tctctctcct
1301 caattggaga cacccctgag caagtctcta gtgaattgga gacaatatat
1351 atgtgtctcc aaatggcatt ctcgtaattc tcaaaagtta cagtcaaatt
1401 tcaaattcga atttgagatc caaaagcggc catccgtata atatt