Sequence of DPV Potato mop-top virus

Potato mop top virus CP gene for coat protein, genomic RNA, clone NB7819

ACC No: AM491618

Dated: 2007-02-19 | Length: 531 | CRC: 1370685002

                
ID   AM491618; SV 1; linear; genomic RNA; STD; VRL; 531 BP.
XX
AC   AM491618;
XX
DT   19-FEB-2007 (Rel. 90, Created)
DT   19-FEB-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Potato mop top virus CP gene for coat protein, genomic RNA, clone NB7819
XX
KW   coat protein; CP gene.
XX
OS   Potato mop-top virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN   [1]
RP   1-531
RA   Chiemsombat P.;
RT   ;
RL   Submitted (07-FEB-2007) to the EMBL/GenBank/DDBJ databases.
RL   Chiemsombat P., Plant Pathology, Kasetsart University, 1 Malaiman Road,
RL   Khamphaengsaen District, Nakhon Pathom 73140, THAILAND.
XX
RN   [2]
RA   Chiemsombat P., Larprom A., Maneechote P., Pongsapich P.;
RT   "Development of the diagnosis of potato mop top virus in potato";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .531
FT                   /organism="Potato mop-top virus"
FT                   /specific_host="Solanum tuberosum"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="Nb7"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="laboratory host root"
FT                   /clone="NB7819"
FT                   /virion
FT                   /PCR_primers="fwd_seq: ggatccatggctgaaaacagaggtga, rev_seq:
FT                   ctatgcaccagcccagcgtaac"
FT                   /db_xref="taxon:37128"
FT   CDS             1. .531
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAM33458.1"
FT                   /translation="MAENRGERRAAVENRYDSWDHEQAMKAAVRKFISYNQFSAQLRNW
FT                   REARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT                   IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT                   KYELVNGLRWAGA"
XX
SQ   Sequence 531 BP; 159 A; 94 C; 149 G; 129 T; 0 other;

am491618 Length: 531  19-FEB-2007  Type: N  Check: 7691  ..

       1  atggctgaaa acagaggtga gcgaagagca gccgtcgaga atagatatga
      51  ctcttgggac catgagcagg ccatgaaggc tgccgtgagg aagtttattt
     101  cttacaatca attctcagct cagttaagaa actggcgcga agctaggtta
     151  aacataattg aacatgccac tagcgtgttg agccaggtgt ctaatttagg
     201  tagaactcat ttctacagta gaaccgaacg ctttggtgga agttcacttg
     251  ttggtgataa attgtacgta tgtctgaatg aaaccagaat gaaaaccgcg
     301  ttgaataata taattgtagc gttgcagaca gtgaacggcg aagggcgggc
     351  aagacgatta ggtccgagag aagcttccgc gaacaccggc ggggaggata
     401  gcgctctgaa tgtggcacat caactcgcag aggtggacga tttattaact
     451  gatgaaagtt ttttaagaga agctgttttt actcaggaca aatatgagct
     501  cgtgaacggg ttacgctggg ctggtgcata a