Sequence of DPV Potato mop-top virus
Potato mop-top virus cprt gene for cp readthrough protein, genomic RNA, isolate 1205
ACC No: AM503615
Dated: 2009-03-23 | Length: 2478 | CRC: 1968105199
ID AM503615; SV 1; linear; genomic RNA; STD; VRL; 2478 BP.
XX
AC AM503615;
XX
DT 23-MAR-2009 (Rel. 100, Created)
DT 23-MAR-2009 (Rel. 100, Last updated, Version 1)
XX
DE Potato mop-top virus cprt gene for cp readthrough protein, genomic RNA,
DE isolate 1205
XX
KW cp readthrough protein; cprt gene.
XX
OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN [1]
RP 1-2478
RA Aura J.M.;
RT ;
RL Submitted (21-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Aura J.M., Department of Applied Biology, University of Helsinki, PO Box
RL 27, 00014 Helsinki, FINLAND.
XX
RN [2]
RA Latvala-Kilby S., Aura J.M., Pupola N., Hannukkala A., Valkonen J.P.T.;
RT "Genetic variability of Potato mop-top virus in Finland and Latvia";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2478
FT /organism="Potato mop-top virus"
FT /isolate="1205"
FT /mol_type="genomic RNA"
FT /country="Finland"
FT /db_xref="taxon:37128"
FT CDS 1. .2478
FT /codon_start=1
FT /transl_except=(pos:529. .531,aa:OTHER)
FT /gene="cprt"
FT /product="cp readthrough protein"
FT /note="read through stop codon"
FT /protein_id="CAM78296.1"
FT /translation="MAENRGERRAAVENRYDAWDHEQAMKAAVRKFISYDQFSAQLRNW
FT REARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT KYELVNGLRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHVDGLVSIN
FT YAQLDRALSVVGGNILPQTLEITRDERKRQLPEVRVIDGERVTIRNKDEATVIRNHGQG
FT LPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDWLCSRLRA
FT RGALNVNRMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAEQNSFVEA
FT VRAIDEGDRELAEACLTNVRRILRRHLNYRPDYFDIIEAKAVYLVTVLTNAMSGPVVGV
FT DDDERRAVVAAFNPSDCGLPNLDSCSLDEIKNFDLSEVVIGEGTNVEQARGYLNLCRNI
FT QCMIETIGTVQFLGVLSSYTGPQYPCISQAFAEDKRIRKERLKDKDNITTADIIAYLVS
FT GVMAAYALVAVSKGGITLFKFMKNYAGGGGDGPGSSRRIRQLEAALPSLPQPEELTMME
FT RLRRLQSSDNDLALRRNPSDMLSQVVRDVVADVDSSDIAEFLNDPARMTEAALEIRLTR
FT IMSAEGSPVDVIEPGGQELISMQVHGESLTVINAGTDSPTVIRSASLSTRHRSSGIEIG
FT SFAVDKVLPYEVEGENDDHGDAGKKPTVAQALMIGGGAVKGQGNLGVTNGKELLKVLGS
FT SRSIGKMSGKMAV"
XX
SQ Sequence 2478 BP; 662 A; 442 C; 718 G; 656 T; 0 other;
am503615 Length: 2478 23-MAR-2009 Type: N Check: 2599 ..
1 atggctgaaa acagaggtga gcgaagagca gccgtcgaga atagatatga
51 cgcttgggac catgagcagg ccatgaaggc tgccgtgagg aagtttattt
101 cttacgatca attctcagct cagttaagaa actggcgcga agctaggtta
151 aacataattg aacatgccac tagcgtgttg agccaggtgt ctaatttagg
201 tagaactcat ttctacagta gaaccgaacg ctttggtgga agttcacttg
251 ttggtgataa attgtacgta tgtctgaatg aaaccagaat gaaaaccgcg
301 ttgaataata taattgtagc gttgcagaca gtgaacggcg aagggcgggc
351 aagacgatta ggtccgagag aagcttccgc gaacaccggc ggggaggata
401 gcgctctgaa tgtggcacat caactcgcag aggtggacga tttattaact
451 gatgaaagtt ttttgagaga agctgttttt actcaggaca aatatgagct
501 cgtgaacgga ttacgctggg ctggtgcata gcaattaacc gctcaggctt
551 tttggtttga cgtcaacgcc gctatcgacg aaattgataa tcgactgcta
601 gcggcggctg cgttaagact attgcctggg caggcaaatc acgtggatgg
651 tctagtgtct ataaattacg cacaattgga tagagcattg agtgttgttg
701 gtgggaatat tttacctcag acgttggaga taactcgtga cgaaagaaaa
751 aggcaattac ctgaggtcag agttatcgac ggcgagcgtg tcactattcg
801 taacaaagat gaggcaacgg tcattagaaa tcatggtcag ggacttcctt
851 ggctattagc gtttttactg ttgttgttat ctgttgtggt ggtgtattct
901 acaatatacc tgaacgactg gttgtatcgg ttaagtgtgg taaggcatgg
951 gaaacctggc ggtggtgcag ctcgtaagct gtcgggtatg tcggactggt
1001 tgtgcagtcg cttaagggcc agaggcgctt tgaatgtgaa taggatgagg
1051 aagaaacaag catgcgatcc gtcgcccact gggttgcgga agttccttac
1101 ttgttataac ttttcttatg aactttggga tcctactggt agttatgacg
1151 atgcgcagcg gagaattata gcggaacaga attcgtttgt ggaagccgtg
1201 agggccatag atgaaggtga cagggagttg gctgaggcgt gtttgactaa
1251 tgttagacgg atcctcagga ggcatcttaa ttaccgacct gattattttg
1301 atattattga agcgaaggcg gtatatttgg tgacagtgct gacaaacgca
1351 atgtcggggc cagttgttgg cgttgacgat gacgagcgga gagcggtggt
1401 agccgcgttt aatccgtcag actgtgggtt accgaatttg gatagttgct
1451 ctttggacga aatcaagaat tttgatttgt ccgaagtggt gatcggtgag
1501 ggtaccaatg ttgaacaagc aagagggtat cttaatcttt gtagaaatat
1551 tcagtgtatg attgagacaa ttggcaccgt tcaatttctt ggtgtgttgt
1601 cgtcgtatac aggtcctcag tatccttgta tatcccaagc ttttgctgag
1651 gataagagga taagaaaaga aaggctgaaa gataaggaca atataacgac
1701 agcggatatt attgcctatt tggtgagtgg ggtaatggca gcctacgctc
1751 ttgtggcagt aagtaaagga gggatcacac tgtttaagtt tatgaagaac
1801 tatgcgggtg gaggtggtga cgggcctggt tcaagcagaa gaataagaca
1851 attagaggcc gctttaccct cccttccgca gccagaagaa ctgaccatga
1901 tggaacgttt gagaagactt caatcttccg ataacgattt agctttgaga
1951 aggaacccgt ccgatatgct tagtcaggtc gtacgtgacg ttgtagccga
2001 tgtagactcc agcgatatcg ctgagttttt gaatgatcct gctaggatga
2051 ccgaagcggc tctggagatc cgattgacca gaataatgag tgctgaaggt
2101 tcaccggtgg atgtaattga gccagggggc caggaactta tttccatgca
2151 agtgcatgga gaaagtctaa ccgtcataaa tgccggcacc gactctccca
2201 cagtgatcag atccgcgtcc ttgtcgacgc ggcaccgtag ttctggtata
2251 gaaatcggtt cttttgcagt ggataaagtg ctgccttacg aggtggaagg
2301 cgaaaacgac gatcatggtg acgccggtaa gaagcccact gtcgcccaag
2351 ctttgatgat tgggggtggt gcggttaagg gacagggtaa tttgggtgtt
2401 actaatggca aagaactctt gaaggtatta ggtagctctc gatctatagg
2451 gaagatgtca ggtaagatgg ctgtttaa