Sequence of DPV Potato mop-top virus
Potato mop-top virus partial cprt gene for cp readthrough protein, genomic RNA, isolate 2505
ACC No: AM503617
Dated: 2009-05-08 | Length: 1248 | CRC: -1909359800
ID AM503617; SV 2; linear; genomic RNA; STD; VRL; 1248 BP.
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AC AM503617;
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DT 23-MAR-2009 (Rel. 100, Created)
DT 08-MAY-2009 (Rel. 100, Last updated, Version 2)
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DE Potato mop-top virus partial cprt gene for cp readthrough protein, genomic
DE RNA, isolate 2505
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KW coat protein; cp gene; cp readthrough protein; cprt gene.
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OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
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RN [1]
RC revised by author [14-AUG-2008]
RP 1-1248
RA Aura J.M.;
RT ;
RL Submitted (21-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Aura J.M., Department of Applied Biology, University of Helsinki, PO Box
RL 27, 00014 Helsinki, FINLAND.
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RN [2]
RA Latvala-Kilby S., Aura J.M., Pupola N., Hannukkala A., Valkonen J.P.T.;
RT "Genetic variability of Potato mop-top virus in Finland and Latvia";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .1248
FT /organism="Potato mop-top virus"
FT /isolate="2505"
FT /mol_type="genomic RNA"
FT /country="Finland"
FT /db_xref="taxon:37128"
FT CDS <1. .>1248
FT /codon_start=2
FT /transl_except=(pos:551. .553,aa:OTHER)
FT /gene="cprt"
FT /product="cp readthrough protein"
FT /protein_id="CAM78298.2"
FT /translation="VCLPPLEMAENRGERRAAVENRYDSWDHEQAMKAAVRKFISYDQF
FT SAQLRNWREARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRM
FT KTALNNIIVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLR
FT EAVFTQDKYELVNGLRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHV
FT DGLVSINYAQLDRALSVVGGNILPQTLEITRDERKRQLHEVRVIDGERVTIRNKDEATV
FT IRNHGQGLPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDW
FT LCSRLRARGALNVSRMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAE
FT QNSFVEAVRAIDEGDR"
FT mat_peptide 23. .550
FT /gene="cp"
FT /product="coat protein"
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SQ Sequence 1248 BP; 333 A; 220 C; 364 G; 331 T; 0 other;
am503617 Length: 1248 08-MAY-2009 Type: N Check: 9642 ..
1 ggtttgttta ccacccttgg aaatggctga aaacagaggt gagcgaagag
51 cagccgtcga gaatagatat gactcttggg accatgagca ggccatgaag
101 gctgccgtga ggaagtttat ttcttacgat caattctcag ctcagttaag
151 aaactggcgc gaagctaggt taaacataat tgaacatgcc actagcgtgt
201 tgagccaggt gtctaattta ggtagaactc atttctacag tagaaccgaa
251 cgctttggtg gaagttcact tgttggtgat aaattgtacg tatgtctgaa
301 tgaaaccaga atgaaaaccg cgttgaataa tataattgta gcgttgcaga
351 cagtgaacgg cgaagggcgg gcaagacgat taggtccgag agaagcttcc
401 gcgaacaccg gcggggagga tagcgctctg aatgtggcac atcaactcgc
451 agaggtggac gatttattaa ctgatgaaag ttttttaaga gaagctgttt
501 ttactcagga caaatatgag ctcgtgaacg ggttacgctg ggctggtgca
551 tagcaattaa ccgctcaggc tttttggttt gacgtcaacg ccgctatcga
601 cgaaattgat aatcgactgc tggcggcggc tgcgttaaga ctattgcctg
651 ggcaggcaaa tcacgtggat ggtttagtgt ctataaatta cgcacaattg
701 gatagagcat tgagtgttgt tggtgggaat attttacctc agacgttgga
751 gataactcgt gacgaaagaa aaaggcaatt acatgaggtc agagttatcg
801 acggcgagcg tgtcactatt cgtaacaagg atgaggcgac ggtcattagg
851 aatcatggtc agggacttcc ttggctatta gcgtttttac tgttgctgtt
901 atctgttgta gtggtgtatt ctacaatata cctgaacgac tggttgtatc
951 ggttaagtgt ggtaaggcat gggaaacctg gcggtggtgc agctcgtaag
1001 ctgtcgggta tgtcggactg gttgtgcagt cgcttaaggg ccagaggcgc
1051 tttgaatgtg agtaggatga ggaagaaaca agcatgcgat ccgtcgccca
1101 ctgggttgcg gaagttcctt acttgttata acttttctta tgaactttgg
1151 gatcctactg gtagttatga cgatgcgcag cggagaatta tagcggaaca
1201 gaattcgttt gtggaagccg tgagggccat agatgaaggt gacaggga